Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_001755380.2
- Aligned Length:
- 5217
- Identities:
- 217
- Gaps:
- 4969
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTGTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCAGCTTTCACAGCCATCGCTGACTGGGAGCAGGAGACCCCTCCCCACTCTACTTCCACTGCCTGAGCTGTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATGCCTCACAGCCCAGTAAGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGTGAGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACAGCTGGGCAGGAGAAGTTCAAGTGCATCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGGGCCGCATGTGAGCAGGCCGAAGCAGACG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTGTGCACCTGGCCAGGGAGATGCAGGCCGAGTACTGGTCAGTGTCGGCCAAGACTGGCGAGAACGTGAAGGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTCTTCAGCCGCGTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTCCAGGTCGGCAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCAGCCTGGGCTGCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGTGACTGTGGTGTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCTCCACCCACCCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCCCACTGGCTGCCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATTTGCAGGGTCATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACTACTCGGCCATGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCGTCACAGTGTTCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGGAGTTTTCTGTTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GATGCTCAAGGTTCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGAAGGGCTATCTCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AACCACTCAGGCCTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCCTAGGGTAACTCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACTGCTGCCTCTCCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGAGGACTTCAGAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACAGAAATACCCCACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCAGCCCCACAGCCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTAGATGGCGAGCACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTGTAAATGTTCAGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCC 2442
Query 1 -------------------------------------------------------ATGGAGTCTCGCTC-TGTT 18
|||||||.||.|.| ||||
Sbjct 2443 CCTTCAACATATTTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTT 2516
Query 19 GCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTG 92
|||||||||||||||||.||||.|.|||||||||||.||||||||||||||||||||||.||||||||||.|||
Sbjct 2517 GCCCAGGCTGGAGTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTCCCAGGTTGAAGCGATTCTCCTG 2590
Query 93 CCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGAGA 166
|||||||||||..|||||||||||.||.||.||||||||||||.|||.||||||||||||||||||.||.||||
Sbjct 2591 CCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGA 2664
Query 167 CGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC--ACCACCTCGGCCTCCCA 238
.|||||||..|||||||.|||||||||.|||.|.||||||||.||||.|||| || .|||||||||||||||.
Sbjct 2665 TGGGGTTTCTCCATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGA-CCTGCCCACCTCGGCCTCCCG 2737
Query 239 AAGTGTTGAGA--------------------------------------------------------------- 249
|||||.||.||
Sbjct 2738 AAGTGCTGGGATTACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTG 2811
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2812 GGCGGCGGGATGGAGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCT 2885
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2886 TCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGC 2959
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2960 TAATTTTTTATATTTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGA 3033
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3034 TCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTT 3107
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3108 TTAAAGGGGTTGTATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCC 3181
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3182 CGCCACATTAGCTGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAG 3255
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3256 AGAGCAGGAAAGACTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAG 3329
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3330 CTAGTGTTGATGGCTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTT 3403
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3404 CCTAGGGAGCTGGCGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTT 3477
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3478 CATGTGGATGGATTGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCT 3551
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3552 TGCCAATGGTGCTGCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCG 3625
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3626 GCCCCCAGCCTGGTCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTT 3699
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3700 TGCTGGGCATAAGCTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTT 3773
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3774 GCCCCTTCGGGCCTCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAG 3847
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3848 CTGTACTGCCTCACGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAA 3921
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3922 TGTGCCAGCTGATTCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGG 3995
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3996 ACAGAAGAGTAAGGTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTC 4069
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4070 TCGGTCAGAATTGCTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCC 4143
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4144 AGCATCGGGCAGTAAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCC 4217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4218 CCTGCAGCCAAGGTGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCT 4291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4292 GTTTCCCTGGACCCTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACA 4365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4366 CGTACCTGAAGCAGGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGC 4439
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4440 TTTCGAGGCTCCTCACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAA 4513
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4514 TGCAGTCTGCAGATGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGT 4587
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4588 GGACACCCCCACAGCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCC 4661
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4662 ATCTGTGGAACCCCAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAG 4735
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4736 GGCCCACAGTAGGTGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTT 4809
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4810 CCCAGCAGACAGATTGCACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTG 4883
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4884 CTTGGCTCTCCTTGGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAG 4957
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4958 AGACCCTCACAGGGCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTG 5031
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5032 GTAGGAGCCAGCCACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAG 5105
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5106 AGGCTCTGGGCACAGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATC 5179
Query 250 ------------------------------------- 249
Sbjct 5180 ACTCCAAAACTTCATTGCTTAAAGCAACAAGCATGTA 5216
