Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_001756648.1
- Aligned Length:
- 5439
- Identities:
- 216
- Gaps:
- 5191
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTGACCTCATGATATGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCATGCCCAGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTTTTATAAGGTTCATCCCATTATTGATATTCTCTAATTGGTGAGACATTGTTCCCACACTTTCGTTAGTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTGACATGGTTCTTTTCTTTTTCTTGGGAGAGGGTCTCTCTGTCGCCCAAGCTGGAGTGCAGTGATGCAGTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGCTCACTGCAGCCTCAACTTCCTGGGCTGAAGTGATCCTCCTACCTCAGCATCCTGAGAGGCTGGGACCATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCAGCCAGCTAATTTTTTAAATTTTTTGTAGAGATGGGGGTCTCACCACATTTCCCAAGCTGCTCTCAAACTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGGCTCAAGCAATCCACGGGCCTCAGCTTCCCAGAGTGCTAGGATTATAGGTGTGAGCCACTGCACCAGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACACGTGGTTTCTCCCTTTGAAGTACTAGCCAGGCCTGACCATGCTTAGCTTCCGAGATCAGCAGGTTCCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGTGCAGCCTCAGATGCAGCATGTTTTAGGTCTTTGAACATATTTAAATGAGCTGACTGAACGTCTTTGTCTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCAATTGCAGCATCGGGCTGGTCCCATTGGTGACTTTTCCCGTGTCTGGGTCGTCCTTTCGGTTTCCTTTCCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCTCATAATTTGTTAAAACCTGGACATTTCACGGGCGATAATGTGGCAACTCCGGAAGTCAGATTCTCTTCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCCAAGGATGTGTTGTTGTTGTTGCCTGTTGGAGCTGTTTCTTTGCTGGGTGACTTTTCTGAACTAATTCTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTAAGCATTAATGTCTCCATTCCCTGCGAGCTGTGGCCACTGAAGCCGCTCTTCAGTTACGGCAGTGGTCAGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATGACTGGTCAGAGAGTTCCTTAGGTGCCTGGAAGCGAAGTCTTTGCCGAGTGGGTCTCTCTCTGTGTGCCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCGTGGCTTCAGTGCTCGGCTAGGCAGTGCTCAACTTTCCCTTAGCCGTCACCTGCTGTCTGCACAGCACCTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGTCAGTCACGGGTGAGGGCTCAGGGCCTTGCCGGCCTTCCTGAATATGGGCACAGCTGCAGACAGCCTTACCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGTGCAGGGCACCTAGATTCCCAAGAAGGGGCAAGAGCTGTTCAAAACCACTACAAGCTGGACATGGTGGCTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACACCTGTAGTGTCAGTGACTCAGAAGGCTGTAATGGGAGGATGACTTGAGGCCAGGAGTTTGAGACCTAGCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACCCCATCCCCCACCCAAAAAAACAAAAACAACAACAAAAACTCACTGTGGACCGCTCATGCCCCAGCTGCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTTTAACCCCAGCTGTTATCCATCACCACAGGCAGCTTCGATTTTCAATCATGGATCTGATGACTTTCAACA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AACTTTCCTGAGGAAAGTGCTGTTCCCACCAGAAGAGATCTCAGGACAAATGTAGACAGCCCTGGCAAGTGGGG 1480
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1481 TCTCCCTGGGAGCTAGCAGACAGGTGAAAGACTGACAGTTCTTGGGGAATTAGGCTTTTCTTTTGTTTTGGAGA 1554
Query 2 TGGAGTCTC--GCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCA 73
|||.||.|| .|| |.|..|||||.||||||||||.|||..||||||||||||||||||||||||||||||||
Sbjct 1555 TGGCGTTTCATACT-TATCACCCAGACTGGAGTGCAATGGTGTGATCTCGGCTCACTGCAACCTCTGCCTCCCA 1627
Query 74 GGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA- 146
|||||||||.|||||.||||||||||||||.||||||||||||.||.||.||..|||||||||||||.|||||
Sbjct 1628 GGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACGCCCAGCTAAT 1701
Query 147 -TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGAT 219
||||||||||||.||.||||||||||||..|||||||.|.|||||||||||.||||..|||||||||.|||||
Sbjct 1702 TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACATCTGACCTCAGGTGAT 1775
Query 220 CCA-CCACCTCGGCCTCCCAAAGTGTTGAGA------------------------------------------- 249
||| |||.|||||||||||||||||.||.||
Sbjct 1776 CCACCCATCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCCTGCCCAGCCCAATTATAGATTTTT 1849
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1850 TAGGTTTAGGTGTTGACAGTAGCTCTCACCTCAGCCTGTTCTCTCTCCTTGTCATGCAGCCCACAGGGGAGATG 1923
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1924 GTCAGGCCAGTGTGGGGGCTAATGAATAAATGCTACACTGTGCCCACTCAGGTCACGACCCCCAGGAGACCTGG 1997
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1998 AGGACTGAATGCTGCTGCCCCCAAGGAGGAGGCTGCCGTCTTATCCCAGGAGGGAGAGCAGGTGAAGTCCCCAG 2071
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2072 GGGAGGAAGCACCTAGCCCCATTCCTGCTGAGCAGGAGGTGGCAGGTACCCCAGACTGGGAGGTAAGGACAGCC 2145
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2146 CGGGGCTTCGACTGAACGTCTCCAGCGTGGGTCCAACTGAGCAGCCATGGAGCACTGCAGAGTGGGAGGCAGCA 2219
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2220 GGGCAGGGAGGCAGTGCTGGAGGCTGGCTCAACCCCAAGACCAGCAGGCCAAGCTGCCATCCCAGGGGAGCGAG 2293
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2294 GACGTCTGTGCAGAGCTGAGAGGCAGCAGCCATGTGTGAACAGACTGGGCCTCATCCTGGCCCCACCGACTTTG 2367
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2368 TGTGGACAGAGCCTGTTTCCCTGTCTGTGCAACACAGAACCTGCCTGATCTCACTGCTGGATCCCTCTTCTTCC 2441
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2442 TGCCAGGAAAATAAAAAGGTTCAAAAGGAAGTTGCTGCGTATCCATCTGAGGCCTCTGAGGACAGCAAAGAGCA 2515
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2516 AAGGCCCTGGGACCGGGTCTACGTGCCCATGACAGAGCTCTGGCTGGACTGGTTCTGAGCCTCTAACACCCCCA 2589
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2590 AGACTCAGAACCGTGAAGAAAATCTTTCCAATAAATCCAAGAGTTGCTGCTGCTATAGGCCAGGCTGCCACCTT 2663
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2664 TCGGGGCCTCCGTCTTCAGACAAACCCAGCCTGGCTTCATCCACACTCCCTGTCCCCACAGCTGCAGGAACAGC 2737
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2738 ACTTCCTGCCACCGAGCCGTGTGACCACAGTGGATTGTCTCTGGAGGGGCCCAAGGGGGCCCTGGCCACCCTTC 2811
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2812 TGACTGACTCGGTGCCAGGGGACAGACCAACGTCCCTCTCGTGCTGACAGCCGGGCCGCACCCTGGCATGAGGG 2885
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2886 CATTTACAGAAATGCTGGCGGAACTGCTGCCAGGGAGGCTGTAGGGTCCTCTGGCAAAAGAGGCCTCAGGTGGC 2959
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2960 TCCTCAGAGTGTCTGTGGTTCTCTGTCCCAGGCTGTTCCCTAAGAAGGTCTGCCCAGGACTCAGGTCACGACCC 3033
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3034 CCAGGAGACCTGGAGGACTGAATGCTGCTGCCCCCAAGGAGGAGGCTGCCGTCTTATCCCAGGAGGGAGAGCAG 3107
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3108 GTGAAGTCCCCAGGGGAGGAAGCACCTAGCCCCATTCCTGCTGAGCAGGAGGTGGCAGGTACCCCAGACTGGGA 3181
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3182 GGTAAGGACAGCCCGGGGCTTCGACTGAACGTCTCCAGCGTGGGTCCAACTGAGCAGCCATGGAGCACTGCAGA 3255
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3256 GTGGGAGGCAGCAGGGCAGGGAGGCAGTGCTGGAGGCTGGCTCAACCCCAAGACCAGCAGGCCAAGCTGCCATC 3329
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3330 CCAGGGGAGCGAGGACGTCTGTGCAGAGCTGAGAGGCAGCAGCCATGTGTGAACAGACTGGGCCTCATCCTGGC 3403
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3404 CCCACCGACTTTGTGTGGACAGAGCCTGTTTCCCTGTCTGTGCAACACAGAACCTGCCTGATCTCACTGCTGGA 3477
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3478 TCCCTCTTCTTCCTGCCAGGAAAATAAAAAGGTTCAAAAGGAAGTTGCTGCGTATCCATCTGAGGCCTCTGAGG 3551
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3552 ACAGCAAAGAGCAAAGGCCCTGGGACCGGGTCTACGTGCCCATGACAGAGCTCTGGCTGGACTGGTTCTGAGCC 3625
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3626 TCTAACACCCCCAAGACTCAGAACCGTGAAGAAAATCTTTCCAATAAATCCAAGAGTTGCTGCTGCTATAGGCC 3699
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3700 AGGCTGCCACCTTTCGGGGCCTCCGTCTTCAGACAAACCCAGCCTGGCTTCATCCACACTCCCTGTCCCCACAG 3773
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3774 CTGCAGGAACAGCACTTCCTGCCACCGAGCCGTGTGACCACAGTGGATTGTCTCTGGAGGGGCCCAAGGGGGCC 3847
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3848 CTGGCCACCCTTCTGACTGACTCGGTGCCAGGGGACAGACCAACGTCCCTCTCGTGCTGACAGCCGGGCCGCAC 3921
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3922 CCTGGCATGAGGGCATTTACAGAAATGCTGGCGGAACTGCTGCCAGGGAGGCTGTAGGGTCCTCTGGCAAAAGA 3995
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3996 GGCCTCAGGTGGCTCCTCAGAGTGTCTGTGGTTCTCTGTCCCAGGCTGTTCCCTAAGAAGGTCTGCCCAGGACT 4069
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4070 CAGGTAATCATATGCTCATTAGAAACTCTTGGGCACTGCCTGTGTGCCCAGCCCAGCCCATTATGTCGGTGAGG 4143
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4144 ACAGATGTGGAGGACAGCAGTCCCTGCCCTTGGTTGGGGCTCCAGGCCAGCAAGGGCCACAGCCCCAGAAGGCA 4217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4218 GAGCAGGAAGACAGGACTCGGGGCAGGTGAAGCAGCCTTCTCGTTGGCAGAAGGGAAACAGAAGCCCGGGGTGG 4291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4292 GGAAGGGTGGGGAAGGGTGGGCCCGGGGTCACACGGGGTAATGGCAGAGCAAGGACTAGGGTCAGGGTCTCTGG 4365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4366 CTCTCAGCTGCCCATGCCACCTCCTCCTTCTCTGCCCGCCCCAGTGCCTTATGGGTCCAAGGTTGACTCCTGTC 4439
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4440 CCTAGGGCAGGCCTGTGGGCCCTGCCTGATCCCTACTGGGAGGATGGTACCTAGGGTTGGAGCCAAACAAGTGT 4513
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4514 CCTCCTCCAGCGCCAGCCTGGCCCTGAGTGCGAACTCGTCACTGGTCAGGGGTCCAGACAGCAGCATCCCTGAG 4587
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4588 GGCCCAGAGAGGTGGCCAGTCCTGTGGTGAGGTTGAGAGGTGTCAACGTGCTGGCGGTCCTCGCTCGCTCTCAG 4661
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4662 CGCCTCCTCGGCCTCAGCTTCTGCTCTGACCACACTTGAGGAGCCCTTCAGCCCAGCGCTGCACTGTGGGAGCC 4735
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4736 CCTCTCTGGACTGGTGGAGGCTGGAGCCGGCTCCGTCTGCTTGCGGGGAGGTATGGAGGGAGAGGCGTGTGCGG 4809
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4810 GAACCTGGGTTGCTCGCGGGCCAGCACCAGTTCTGGGTGGGCAGGGGCTCAGCGGGCCCTGCACTCGGAGCGGC 4883
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4884 CGGCTGGTGCCTCTGGCCCCAGGCAGTGAGGGGCTTAGCACCTGGGCCAGCAGCTGCAGAGGGGGCACCGGGTC 4957
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4958 CCCCAGTACTGCTGGCCTGCCGGCGCTCACCACACTTGAATTGTCGCCAGGCCTCAGTCACCTCCCCGCGGGGC 5031
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5032 AGGGCTCAGGACTTGCAGCCTGCCATGCCCAAGCCTCCCTACGGTGGGCTCCCTGCGAGGCCCAAGCCTCCCGG 5105
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5106 ATGGGTGCCTCCCACTGCTCCACGGCACCTGGTCCCGTCCACTGCCCAAGGGCTGAGGAGTACAGGTGCCTGGT 5179
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5180 GTGGGACTAGCAGGCAGCTCTGCCTGTGGCCCTGGCATAGGATCCACTAGGCGAAGCTGGCTGGGCTCCTGAGT 5253
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5254 CAGGTGGGGACTTGGAGAACTTTTATGTCTAGCCAGAGGATTGTATATGCACCAATCAGCACTCTGTGTCTAGC 5327
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5328 TCCGGGTTCGTGCATGCACCAATTAGCACTCTGTATCTAGCTAATCTGGTGGGGACTTGGGGAACCTTTATTTC 5401
Query 250 ------------------------------------- 249
Sbjct 5402 TAGCTAAAAGATTGTAAATACACCAATCAGCACTCTG 5438
