Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_001756825.2
Aligned Length:
4767
Identities:
216
Gaps:
4519

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTTGACCTCATGATATGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCATGCCCAGCCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTTTTTATAAGGTTCATCCCATTATTGATATTCTCTAATTGGTGAGACATTGTTCCCACACTTTCGTTAGTTCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTTGACATGGTTCTTTTCTTTTTCTTGGGAGAGGGTCTCTCTGTCGCCCAAGCTGGAGTGCAGTGATGCAGTCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGCTCACTGCAGCCTCAACTTCCTGGGCTGAAGTGATCCTCCTACCTCAGCATCCTGAGAGGCTGGGACCATA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGCAGCCAGCTAATTTTTTAAATTTTTTGTAGAGATGGGGGTCTCACCACATTTCCCAAGCTGCTCTCAAACTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTGGGCTCAAGCAATCCACGGGCCTCAGCTTCCCAGAGTGCTAGGATTATAGGTGTGAGCCACTGCACCAGGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TACACGTGGTTTCTCCCTTTGAAGTACTAGCCAGGCCTGACCATGCTTAGCTTCCGAGATCAGCAGGTTCCAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGGTGCAGCCTCAGATGCAGCATGTTTTAGGTCTTTGAACATATTTAAATGAGCTGACTGAACGTCTTTGTCTA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCAATTGCAGCATCGGGCTGGTCCCATTGGTGACTTTTCCCGTGTCTGGGTCGTCCTTTCGGTTTCCTTTCCAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTCTCATAATTTGTTAAAACCTGGACATTTCACGGGCGATAATGTGGCAACTCCGGAAGTCAGATTCTCTTCCC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGCCAAGGATGTGTTGTTGTTGTTGCCTGTTGGAGCTGTTTCTTTGCTGGGTGACTTTTCTGAACTAATTCTGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTAAGCATTAATGTCTCCATTCCCTGCGAGCTGTGGCCACTGAAGCCGCTCTTCAGTTACGGCAGTGGTCAGCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AATGACTGGTCAGAGAGTTCCTTAGGTGCCTGGAAGCGAAGTCTTTGCCGAGTGGGTCTCTCTCTGTGTGCCGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCGTGGCTTCAGTGCTCGGCTAGGCAGTGCTCAACTTTCCCTTAGCCGTCACCTGCTGTCTGCACAGCACCTCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGTCAGTCACGGGTGAGGGCTCAGGGCCTTGCCGGCCTTCCTGAATATGGGCACAGCTGCAGACAGCCTTACCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACGTGCAGGGCACCTAGATTCCCAAGAAGGGGCAAGAGCTGTTCAAAACCACTACAAGCTGGACATGGTGGCTC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACACCTGTAGTGTCAGTGACTCAGAAGGCTGTAATGGGAGGATGACTTGAGGCCAGGAGTTTGAGACCTAGCAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GACCCCATCCCCCACCCAAAAAAACAAAAACAACAACAAAAACTCACTGTGGACCGCTCATGCCCCAGCTGCTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTTTTTAACCCCAGCTGTTATCCATCACCACAGGCAGCTTCGATTTTCAATCATGGATCTGATGACTTTCAACA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AACTTTCCTGAGGAAAGTGCTGTTCCCACCAGAAGAGATCTCAGGACAAATGTAGACAGCCCTGGCAAGTGGGG  1480

Query    1  -------------------------------------------------------------------------A  1
                                                                                     |
Sbjct 1481  TCTCCCTGGGAGCTAGCAGACAGGTGAAAGACTGACAGTTCTTGGGGAATTAGGCTTTTCTTTTGTTTTGGAGA  1554

Query    2  TGGAGTCTC--GCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCA  73
            |||.||.||  .|| |.|..|||||.||||||||||.|||..||||||||||||||||||||||||||||||||
Sbjct 1555  TGGCGTTTCATACT-TATCACCCAGACTGGAGTGCAATGGTGTGATCTCGGCTCACTGCAACCTCTGCCTCCCA  1627

Query   74  GGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-  146
            |||||||||.|||||.||||||||||||||.||||||||||||.||.||.||..|||||||||||||.||||| 
Sbjct 1628  GGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACGCCCAGCTAAT  1701

Query  147  -TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGAT  219
             ||||||||||||.||.||||||||||||..|||||||.|.|||||||||||.||||..|||||||||.|||||
Sbjct 1702  TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACATCTGACCTCAGGTGAT  1775

Query  220  CCA-CCACCTCGGCCTCCCAAAGTGTTGAGA-------------------------------------------  249
            ||| |||.|||||||||||||||||.||.||                                           
Sbjct 1776  CCACCCATCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCCTGCCCAGCCCAATTATAGATTTTT  1849

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1850  TAGGTTTAGGTGTTGACAGTAGCTCTCACCTCAGCCTGTTCTCTCTCCTTGTCATGCAGCCCACAGGGGAGATG  1923

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1924  GTCAGGCCAGTGTGGGGGCTAATGAATAAATGCTACACTGTGCCCACTCAGGTCACGACCCCCAGGAGACCTGG  1997

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1998  AGGACTGAATGCTGCTGCCCCCAAGGAGGAGGCTGCCGTCTTATCCCAGGAGGGAGAGCAGGTGAAGTCCCCAG  2071

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2072  GGGAGGAAGCACCTAGCCCCATTCCTGCTGAGCAGGAGGTGGCAGGTACCCCAGACTGGGAGGTAAGGACAGCC  2145

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2146  CGGGGCTTCGACTGAACGTCTCCAGCGTGGGTCCAACTGAGCAGCCATGGAGCACTGCAGAGTGGGAGGCAGCA  2219

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2220  GGGCAGGGAGGCAGTGCTGGAGGCTGGCTCAACCCCAAGACCAGCAGGCCAAGCTGCCATCCCAGGGGAGCGAG  2293

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2294  GACGTCTGTGCAGAGCTGAGAGGCAGCAGCCATGTGTGAACAGACTGGGCCTCATCCTGGCCCCACCGACTTTG  2367

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2368  TGTGGACAGAGCCTGTTTCCCTGTCTGTGCAACACAGAACCTGCCTGATCTCACTGCTGGATCCCTCTTCTTCC  2441

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2442  TGCCAGGAAAATAAAAAGGTTCAAAAGGAAGTTGCTGCGTATCCATCTGAGGCCTCTGAGGACAGCAAAGAGCA  2515

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2516  AAGGCCCTGGGACCGGGTCTACGTGCCCATGACAGAGCTCTGGCTGGACTGGTTCTGAGCCTCTAACACCCCCA  2589

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2590  AGACTCAGAACCGTGAAGAAAATCTTTCCAATAAATCCAAGAGTTGCTGCTGCTATAGGCCAGGCTGCCACCTT  2663

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2664  TCGGGGCCTCCGTCTTCAGACAAACCCAGCCTGGCTTCATCCACACTCCCTGTCCCCACAGCTGCAGGAACAGC  2737

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2738  ACTTCCTGCCACCGAGCCGTGTGACCACAGTGGATTGTCTCTGGAGGGGCCCAAGGGGGCCCTGGCCACCCTTC  2811

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2812  TGACTGACTCGGTGCCAGGGGACAGACCAACGTCCCTCTCGTGCTGACAGCCGGGCCGCACCCTGGCATGAGGG  2885

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2886  CATTTACAGAAATGCTGGCGGAACTGCTGCCAGGGAGGCTGTAGGGTCCTCTGGCAAAAGAGGCCTCAGGTGGC  2959

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2960  TCCTCAGAGTGTCTGTGGTTCTCTGTCCCAGGCTGTTCCCTAAGAAGGTCTGCCCAGGACTCAGGTAATCATAT  3033

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3034  GCTCATTAGAAACTCTTGGGCACTGCCTGTGTGCCCAGCCCAGCCCATTATGTCGGTGAGGACAGATGTGGAGG  3107

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3108  ACAGCAGTCCCTGCCCTTGGTTGGGGCTCCAGGCCAGCAAGGGCCACAGCCCCAGAAGGCAGAGCAGGAAGACA  3181

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3182  GGACTCGGGGCAGGTGAAGCAGCCTTCTCGTTGGCAGAAGGGAAACAGAAGCCCGGGGTGGGGAAGGGTGGGGA  3255

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3256  AGGGTGGGGAAGGGTGGGCCCGGGGTCACACGGGGTAATGGCAGAGCAAGGACTAGGGTCAGGGTCTCTGGCTC  3329

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3330  TCAGCTGCCCATGCCACCTCCTCCTTCTCTGCCCGCCCCAGTGCCTTATGGGTCCAAGGTTGACTCCTGTCCCT  3403

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3404  AGGGCAGGCCTGTGGGCCCTGCCTGATCCCTACTGGGAGGATGGTACCTAGGGTTGGAGCCAAACAAGTGTCCT  3477

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3478  CCTCCAGCGCCAGCCTGGCCCTGAGTGCGAACTCGTCACTGGTCAGGGGTCCAGACAGCAGCATCCCTGAGGGC  3551

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3552  CCAGAGAGGTGGCCAGTCCTGTGGTGAGGTTGAGAGGTGTCAACGTGCTGGCGGTCCTCGCTCGCTCTCAGCGC  3625

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3626  CTCCTCGGCCTCAGCTTCTGCTCTGACCACACTTGAGGAGCCCTTCAGCCCAGCGCTGCACTGTGGGAGCCCCT  3699

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3700  CTCTGGACTGGTGGAGGCTGGAGCCGGCTCCGTCTGCTTGCGGGGAGGTATGGAGGGAGAGGCGTGTGCGGGAA  3773

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3774  CCTGGGTTGCTCGCGGGCCAGCACCAGTTCTGGGTGGGCAGGGGCTCAGCGGGCCCTGCACTCGGAGCGGCCGG  3847

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3848  CTGGTGCCTCTGGCCCCAGGCAGTGAGGGGCTTAGCACCTGGGCCAGCAGCTGCAGAGGGGGCACCGGGTCCCC  3921

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3922  CAGTACTGCTGGCCTGCCGGCGCTCACCACACTTGAATTGTCGCCAGGCCTCAGTCACCTCCCCGCGGGGCAGG  3995

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3996  GCTCAGGACTTGCAGCCTGCCATGCCCAAGCCTCCCTACGGTGGGCTCCCTGCGAGGCCCAAGCCTCCCGGATG  4069

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4070  GGTGCCTCCCACTGCTCCACGGCACCTGGTCCCGTCCACTGCCCAAGGGCTGAGGAGTACAGGTGCCTGGTGTG  4143

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4144  GGACTAGCAGGCAGCTCTGCCTGTGGCCCTGGCATAGGATCCACTAGGCGAAGCTGGCTGGGCTCCTGAGTCAG  4217

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4218  GTGGGGACTTGGAGAACTTTTATGTCTAGCCAGAGGATTGTATATGCACCAATCAGCACTCTGTGTCTAGCTCC  4291

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4292  GGGTTCGTGCATGCACCAATTAGCACTCTGTATCTAGCTAATCTGGTGGGGACTTGGGGAACCTTTATTTCTAG  4365

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4366  CTAAAAGATTGTAAATACACCAATCAGCACTCTGTGTCTAGCTCAGGGTTTGTAAACACACCAGTCAGCACCCT  4439

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4440  GTGTCTAACTCAAGGTTTGTAAACGCACCAATCAGTGCTCTCTGTCTACTCTATCTAGCTAATCTAGTGGGGAC  4513

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4514  TGGGACAACCTTTATGTCTAGCTAAGGGATTGTAAATACACCATTCAGCACTCTGTGTCTAGCTCAAGGTTTGT  4587

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4588  AAATATACCAATCAGTACTCTGTGTCTAGCTCAGGGATTGTAAATGCACCAATCAGCTCTCTGTAAGTGGACCA  4661

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 4662  ATCCACTGTCTGTAAAATGGGCCAATCAGCAGGATGTGGGTGGGGGTCAGATAAGGGAATAAAAGCAGGCTGCC  4735

Query  250  -------------------------------  249
                                           
Sbjct 4736  TGAAGTAGCAGCGGCAACCTGGTTGCCATCA  4766

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