Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_002956444.1
- Aligned Length:
- 4073
- Identities:
- 215
- Gaps:
- 3828
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCAGGTAAAGCCCTATCACCGGGTCTGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCCAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGCACGGCAGGAGCGGCGGCCCAGCACTTGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGCAAAATATCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCTGGCCTCTGCTGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGTGAATTTCTGTACTGGAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCTCCAGGCTGACAAGGCGAAGGGCATGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGAA 814
Query 1 --------------------------------------------------ATGGAGTCTCGCTCTGTTGCCCAG 24
|..|||||||||||||||||||||
Sbjct 815 TCATTAGGCGTCTTCCCTTCGCTCCCCACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCAG 888
Query 25 GCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAG 98
||||||||.||||||...|||||.|||||||||||||||||||||||..|||||||||||||||.|||||..||
Sbjct 889 GCTGGAGTACAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTAG 962
Query 99 CCTCCAGAGTAGCTGGGACTATAGACATG----CACCACCACGCCCGGCTAATTT-------------TGTATT 155
|||||.||||||||||||.| |||.| |.|||||||.||.||||||||| |.||||
Sbjct 963 CCTCCTGAGTAGCTGGGATT----ACAGGTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATTTATTTATT 1032
Query 156 TTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCT 228
|||.||.||||.||||||||||||||||.|.|||||||||||.|||||||||||||||||||||||||| .|.|
Sbjct 1033 TTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTT 1106
Query 229 CGGCCTCCCAAAGTGTTGAGA----------------------------------------------------- 249
.||||||||||||||.||.||
Sbjct 1107 TGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGC 1180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1181 GCTCTGGCTCTCAATGGAGACATCAAGCCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATT 1254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1255 TCTGCCATTGTGCAGGGAGCAATTGAAAAATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCA 1328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1329 GCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAA 1402
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1403 CCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAG 1476
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1477 GCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAG 1550
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1551 CCTGCGCAACAAGAGTGAAACTGTCTCAAAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAA 1624
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1625 TCAGTTAGTTCGATTATTAGAAGACTAGATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTC 1698
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1699 TAGGAGGAATGTACCTCCCCACCCATTCCTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAAC 1772
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1773 TGACAAGGTGAGCAGAGATTTGCAGTGGGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGG 1846
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1847 GGAAGCACACTCCCCAGCCCCTCCTTAGCCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGA 1920
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1921 CCCAGCCGTGGCTGGGAGCAAGCCTGGAAGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAG 1994
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1995 TCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTC 2068
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2069 AAGCTATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTG 2142
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2143 GATGCTGCATTGAATTGAGCAAAGGAACTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCG 2216
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2217 GGGCAGAGCAGTGGTGGGGACCTGTTTCCAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCT 2290
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2291 CAGAGGAGAGGGTGATGTTTGACAGTGGCTGCCTGCCCTGAAAATCGCCCTTGTCTGTCCAGCCTGGCCTGAAT 2364
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2365 TTCACCCACATCAACCCACATGGGATACTTTATTTATTTATTTATCTATTTATTTATTTATTTATTTATTTTAG 2438
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2439 AGCCAGGGTCTCACCCTGTGGCCCAGGCTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTCAAACTCCT 2512
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2513 GGGCTCAAGTGATCCTCCCGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGAACACACCACTGTGCCTGGCTTA 2586
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2587 TTTTTCTTTTTTTTTTTGGTAGAGATGGGGGTCTCTCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAA 2660
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2661 GTGATCCTCCTGCCTCGGCCTCCCAAAGTACTGGGATTACAGAATCGGCTCCCAGACACCTGCCACTCGTGAAT 2734
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2735 GCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGCGATGACATGGATCCTGCGGACAAACCG 2808
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2809 CCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAG 2882
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2883 CACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAG 2956
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2957 CCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGC 3030
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3031 CGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGG 3104
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3105 CGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTA 3178
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3179 TGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAAC 3252
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3253 CGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAGCCCAGGCT 3326
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3327 GGAGTTCAGTGATGGATCTCAGCTCACTGCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTC 3400
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3401 CCAAGTAGCTGGGATTACAGACGTGCACCACCAGGCCCAGCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAA 3474
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3475 GATGGTTTGTAGCTTTGTTGCCTAGGCTGGTCTTGAACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCC 3548
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3549 AAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAACAC 3622
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3623 ATGAAATTAGGAGGATACATTCAAACCACAGCAGTATATTATGACCATAATATTCATTAACTGTGTAACAGGCT 3696
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3697 GGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGT 3770
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3771 TTGAGACCAGCCTGGCCCACATGATGAAACCGCCTCTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCA 3844
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3845 GGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGT 3918
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3919 GAGCCTGATTGCACCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAATAAACAAACAAACAAA 3992
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3993 CAAAACCTGTATAACAGAGTGTCATTGAATTTCTAAACGTTGAAAGACTTCACATTAAAAAAAAACTCACAATT 4066
Query 250 --- 249
Sbjct 4067 TAA 4069
