Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_002956447.1
- Aligned Length:
- 3933
- Identities:
- 215
- Gaps:
- 3688
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGCCGATGTACCAGACAAGAAGACAAGAAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAACAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGCAGTCTTCTCCAGGCTGACAAGGCGAAGGGCATGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGA 666
Query 1 ----------------------------------------------------------ATGGAGTCTCGCTCTG 16
|..|||||||||||||
Sbjct 667 ATCATGAATCATTAGGCGTCTTCCCTTCGCTCCCCACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTG 740
Query 17 TTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTC 90
||||||||||||||||.||||||...|||||.|||||||||||||||||||||||..|||||||||||||||.|
Sbjct 741 TTGCCCAGGCTGGAGTACAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCC 814
Query 91 TGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATG----CACCACCACGCCCGGCTAATTT----------- 149
||||..|||||||.||||||||||||.| |||.| |.|||||||.||.|||||||||
Sbjct 815 TGCCGTAGCCTCCTGAGTAGCTGGGATT----ACAGGTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATT 884
Query 150 --TGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC 221
|.|||||||.||.||||.||||||||||||||||.|.|||||||||||.|||||||||||||||||||||||
Sbjct 885 TATTTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCC 958
Query 222 ACC-ACCTCGGCCTCCCAAAGTGTTGAGA--------------------------------------------- 249
||| .|.|.||||||||||||||.||.||
Sbjct 959 ACCTGCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAA 1032
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1033 CCAAAAGCGCTCTGGCTCTCAATGGAGACATCAAGCCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTC 1106
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1107 CAGGAATTTCTGCCATTGTGCAGGGAGCAATTGAAAAATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTG 1180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1181 TAATCCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCA 1254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1255 CAGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTA 1328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1329 CTCTGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTG 1402
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1403 CACTCCAGCCTGCGCAACAAGAGTGAAACTGTCTCAAAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAA 1476
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1477 AGGAAAAATCAGTTAGTTCGATTATTAGAAGACTAGATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACT 1550
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1551 CCCCTCTCTAGGAGGAATGTACCTCCCCACCCATTCCTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAG 1624
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1625 AATGTAACTGACAAGGTGAGCAGAGATTTGCAGTGGGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTT 1698
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1699 TAGCCAGGGGAAGCACACTCCCCAGCCCCTCCTTAGCCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACA 1772
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1773 GTCCTGGACCCAGCCGTGGCTGGGAGCAAGCCTGGAAGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTG 1846
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1847 AGACTAAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTC 1920
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1921 CCAGGTTCAAGCTATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCT 1994
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1995 CTGGACTGGATGCTGCATTGAATTGAGCAAAGGAACTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCT 2068
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2069 TCCTTCCGGGGCAGAGCAGTGGTGGGGACCTGTTTCCAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCA 2142
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2143 GGGATCCTCAGAGGAGAGGGTGATGTTTGACAGTGGCTGCCTGCCCTGAAAATCGCCCTTGTCTGTCCAGCCTG 2216
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2217 GCCTGAATTTCACCCACATCAACCCACATGGGATACTTTATTTATTTATTTATCTATTTATTTATTTATTTATT 2290
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2291 TATTTTAGAGCCAGGGTCTCACCCTGTGGCCCAGGCTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTC 2364
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2365 AAACTCCTGGGCTCAAGTGATCCTCCCGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGAACACACCACTGTGC 2438
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2439 CTGGCTTATTTTTCTTTTTTTTTTTGGTAGAGATGGGGGTCTCTCTATGTTGCCCAGGCTGGTCTCAAACTCCT 2512
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2513 GGCCTCAAGTGATCCTCCTGCCTCGGCCTCCCAAAGTACTGGGATTACAGAATCGGCTCCCAGACACCTGCCAC 2586
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2587 TCGTGAATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGCGATGACATGGATCCTGCGG 2660
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2661 ACAAACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACG 2734
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2735 TCCTTCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAG 2808
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2809 AATGAAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCT 2882
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2883 CACCTGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCT 2956
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2957 CCCTGTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGG 3030
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3031 CCCCTTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTC 3104
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3105 GTTCCAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAG 3178
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3179 CCCAGGCTGGAGTTCAGTGATGGATCTCAGCTCACTGCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCC 3252
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3253 TCGGCCTCCCAAGTAGCTGGGATTACAGACGTGCACCACCAGGCCCAGCTAATTTATTTTTTAGTTTTTAATTT 3326
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3327 GCTGGTAAGATGGTTTGTAGCTTTGTTGCCTAGGCTGGTCTTGAACTCCTGGCTTCAAGCGATCCTCCAGTCTT 3400
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3401 GACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTTCAATACTGCCCCATTGGGGGTTACGTT 3474
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3475 TCCAACACATGAAATTAGGAGGATACATTCAAACCACAGCAGTATATTATGACCATAATATTCATTAACTGTGT 3548
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3549 AACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCAGAGTGGGTAGATCACTCGAGG 3622
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3623 TCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCCTCTCTACTAAAAATACAAAAAATTAGCCGGTG 3696
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3697 TGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGTGGAG 3770
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3771 GTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAATAAACAAA 3844
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3845 CAAACAAACAAAACCTGTATAACAGAGTGTCATTGAATTTCTAAACGTTGAAAGACTTCACATTAAAAAAAAAC 3918
Query 250 ----------- 249
Sbjct 3919 TCACAATTTAA 3929
