Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_002957063.1
Aligned Length:
2014
Identities:
217
Gaps:
1771

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCGGCCTCCCTAAGTTTTCGGATCACAGGCGTGAGCCACCACGCCCAGCCGGATTGCAATTTTAAATAGCATA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATCAGAGAGGCTTAATGGAAGAGGTAATATTTGAGGAAAGACCTGAAGAAGGTAAGGGAGTAGGCACTGAAGAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATTGGGGGAACAGTGCTCCCCGAGACATCTGGGCAGCCAGGCACAGGGACCACAAGCAGAAAAGGGTCCTGTGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGTTTCGTGTTTTCTTTACAATTTGTCAATGTGAACACCATGCTCACACCAAAGAACAGCAAGTTTCCTACCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGCTTCTCTGCCTTCCTCCTTCCTTCCCTCCCTTCCTCCCTCCTTCCTTCCTTTCTTCCTTTCTTCCTTCCGTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCCCTTTCTTCCCAATATGCCCCACTTCAATGGATGAGTTTTCCAGCTCCCTCGGCTGCTTTCTGCATTGCAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGACAAGTATCCACTAAATATTCATTCATTAGAAACAGCCAGACGATGCTGAGCCTCTGTAGCTCTCTAGCAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTACCATAGCACAGATCTCAGGAAGACCCACAAGATACATTTGTCAACAAGTCGATGGCCTCCTATGTGGCCCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTGCTGTGTGCTGAGGCTACAGGAAGGAACAAAGCCTCCTATCTGGGGGCCCACTTCTGCAGTTAAGTTCATCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGTGTCCTTTGTAATACTGCAAAGAGAACTTCTTACGCTGTAGCTGAATGAGAGAAATATCCCATTCCAAACCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTGATGGAAACTGGCCAAGTCAGCGTGTGAGAGGAAGAAGGAAGTGTGTGGCACCTCCTGCCTCGCTCTCTTCC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCCTGTTCCGGCCATGTGAAGTGCTGGCTCCTCATTTTCCTTCCACCATGATTGGAAGCTTCCTGAGGCCTCAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CAGAAGCAGATGCTGCCATGCTTCCTGTACAGCCTGCAGAACCAAAAAGTTTGCCTACCCTTGCACCGGAAGCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAGGGAAAGAGATGGGCTTGTTGGAAACCAGGAAAGGAGAAATTGACAGAGCTGCAGGGAGCAATCCCTTTCC  1036

Query    1  ----------------------ATGGAGTC--------TCGCTCTGTTGCCCA------------GGC-----T  27
                                  ||   |||        .|.||.|||||..||            |||     |
Sbjct 1037  ACCTTCACCCAGGACTGAGATCAT---GTCATACAAAAGCCCTGTGTTGTTCAGAGGACCAGAGGGGCTGGAGT  1107

Query   28  GGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCT  101
            ||||||.|||||..|||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1108  GGAGTGAAGTGGTGTGATCTCGGCTTACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCT  1181

Query  102  CCAGAGTAGCTGGGACTATAGACATGC--ACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACGGGGT  172
            ||.||||||||||||..|.||||  ||  .|||.||.|||.|||||| ||||||||||||.||.||||.|||||
Sbjct 1182  CCTGAGTAGCTGGGATCACAGAC--GCCTGCCATCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGT  1253

Query  173  TTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTT  245
            ||.||||||||.|||||||||||||.|||||||||||||||||||||||||| .||||||||||||||||||.|
Sbjct 1254  TTCGCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCCTCGGCCTCCCAAAGTGCT  1327

Query  246  GAGA----------------------------------------------------------------------  249
            | ||                                                                      
Sbjct 1328  G-GAATTACAGGCATGAACCACTGCACCTGGCCTCTATTACCTTTAAAAGTGCTCCTTGAAGAGAAAATCCACT  1400

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1401  CTGCCGTTTCAAGCTTGACTTCCCTCCCCAGTCTTAGAGACTGATCACTGGGGCAGAGTGACATTTTCCCACAA  1474

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1475  TGCTGGCTCATTATTTTCCTCCTGGAATTGCAAATCCAAGGGACAAGTGGTACAGCCTGCACCCATCCAGAAGG  1548

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1549  GGAGGGAATCCCACCAGAGGTGCCCTGAAACAAAGAAAACAAGTAACTTCAAAACCACATCCTAAAATCTGGAC  1622

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1623  CTGTGACAGGACAGATGGAACTCTGGATTGTTTGATTCTATCAGCAGAACAGAGGAAGGAAATGTTTTAAAACG  1696

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1697  AGATTATGTTATTTTCCCCAGTTATTATGAAGCCTTCCTGAAATGAACTTTAAATATCGGCCACCACTTTCATG  1770

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1771  AGGCTGAATGGGATTCAGCAATTAGGAGCGTTGCAGGGAAGTGTGGCAGGGCAGAGGTGGGACAAATTGCAGAT  1844

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1845  CCCTGTGGGGTCCCTTGGTTAGGTGACAATTAGTCTATAAAACACAGCTGTGTGTGTTAGGGAGGGAGTGGTGT  1918

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1919  CTTTAAAAAGCTCTGTGCCCAATAGGAACATTAATTAAAGGGTCTTTTTTCAAAGGACATTAATAATAATGAAT  1992

Query  250  ----------------  249
                            
Sbjct 1993  AAAAAGCCTTCTGCGA  2008

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