Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_935264.2
Aligned Length:
3038
Identities:
217
Gaps:
2789

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTTGAGTCTGCGGAGCCGCGGGCAGTGGCAGTCAGGCCTCCCCGCTCTGTGCTACCTGCGGCCCGGCTCTCCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGCGCCCCCACTCGCGCTGCGATGACGCGCTCACTGTTCAAGGGAAACTTTTGGAGTGCAGACATCCTCAGCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCATCGGCTATGACAACATTATCCAACATCTGAACAATGGCCGCAAGAACTGCAAAGAGTTTGAAGACTTTCTA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAAGAAAGGGCAGCAATTGAAGAGAGGTATGGCAAAGATCTGCTCAACCTCTCTAGGAAGAAGCCGTGTGGACA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTCTGAAATCAACACCCTGAAGCGGGCCCTTGAAGTCTTCAAGCAGCAAGTAGACAATGTGGCACAATGTCACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTCAGCTTGCACAGAGTTTAAGAGAAGAGGCCAGGAAGATGGAAGAATTCAGGGAAAAGCAAAAACTACAACGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAAAAGACAGAGCTCATAATGGATGCTATCCATAAACAAAAGAGCTTACAATTCAAGAAAACCATGGATGCAAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAAGAACTATGAGCAGAAATGCCGGGACAAAGATGAGGCAGAACAGGCCGTCAGCCGGAGTGCCAACCTGGTGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACCCGAAGCAACAAGAAAAGCTTTTTGTGAAACTGGCAACTTCAAAGACCGCAGTAGAGGACTCAGACAAAGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TACATGCTGCACATCGGCACCCTGGATAAGGTCCGAGAAGAGTGGCAGAGTGAGCACATCAAGGCCTGCGAGCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATTTTTCTGTAGGCATTTGAGGCTCAAGAATGTGAACGAATAAACTTCTTCCGGAATGCATTGTGGTTACATGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAATCAGCTGTCACAACAATGTGTCACCAGTGATGAAATGTACGAACAAGTCCGAAAGAGTTTAGAAATGTGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCATTCAGAGGGACATTGAATACTTTGTGAATCAACGCAAAACTGGACAGATTCCACCAGCACCCATCATGTAT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAGAATTTCTACTCCTCCCAGAAGAATGCAGTCCCAGCAGGAAAGGCTACAGGGCCTAACTTGGCAAGGAGAGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACCCCTCCCAATTCCTAAAAGCTCACCAGATGATCCCAATTACTCTTTGGTTGATGACTACAGTTTGCTCTATC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AGTAAAATCAATGAAACCAGAGCTTTTTCCGGCTAGTGCTTCTGTGATATGGAAAGGGCACCCAGAGCAGCAGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACCTATAGCCACGTTATGTCAGCAATGAAGACTTTGAAGTGAACCCTTGCTATAATTTTTTAGAGATTTAAAAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTATGGTAGACATTTAGGACAACATAAGCAAGTAGAGTTCTGCAGTTTTTTGAAGTTTACAAATTGCCCCATTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGAAGAATTATTCTTTCCCAGTTACTCAGGTTATGAATGAATTAGGTTTTCAACATGGGAAGCATGAAATCCAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTCTGGATTTGGAGCATCCACTTGAGGAGCAGAGGTGGCAGCAGAGGATTCTGAGCCACCAACTGCAGTAGTGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTCCTTTGGCTTTGGGCAGCCTGGCTGTGGAGTTTCCACGGCGACACACAGCCTCAGTGGTGCAAGATTTAAAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTACCTTCCTTTTTGGCTGGAAGACTTAGAAGCCGCCTGATCATACTTTCTCATTTTACAGATGAGGAAATAAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCCTACAAGTGTGAAATTAATTTCCTTACAGTTTTCCTAGCTGATGAGGGACAGAACCAGAACTAGAGCCTGAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CCCAACCCACATCACTATTCTTCTAACCCTTCCTGAAGTTGTGATGCTCATGCTGAAATTTAAGATGCCAAATA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTTTTGCCAGCACTTTTTCAGTTGGGAGAATCACCAGGGTTTAAATGTCAGATTTATTTTTATGTGGATCCCTG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TGTATGCTGAACTACAGAGCATGATGTTTAATCTAATTTAAGGAGCCACTGATTGTAAAACATGCCATTATTTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATGTTGCACTAAGAAGGTGGGGTCGAGGAGTTGCCAATAAACTTGGGACAGACTATTGATGGCCAAGCCCATCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GAATTTAAGATGCTAAAGTATGAAAAAAATACATCTTAGAATCAATGAAATACCATATTTTGATTCCATTCCTC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AAGATAATTTTAGAGTTATAAAACCAGTCCTCAATTTTGGGTCTTCACAGAGAATCTTTCCCTTGCTAGACCCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGAATTTTAAATGCATCCGTCTTACACTTTCACAAATATTTGGGTTTTCCTTTTTCACTCACAAACAGCAGGGA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GGTCATGTACTTTTTGTACAACACCTGTGCACTATGAGAAAATGGTACCTTTTAGTTATTGACAAGTTAAAATA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GCACTCTCAGTTTTTCAGTATTACAGAGAGCAAATAGTTTCCTCTCCTGCTCTGTGCAGTAGCTTTTCCAGAAC  2368

Query    1  -------------------------------------------------------------ATGGAGTCTCGCT  13
                                                                         |..|||||||.||
Sbjct 2369  TATGGACAAATTGATCAGAAGAAGATTGATTATTTCCTCATCTTTTTTTCTTTTTTTTGAGACAGAGTCTCTCT  2442

Query   14  CTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTC  87
            ||||..|||||||||.|||||||.|||.|||||||.|||||||||||||||||||||||.||||||||.|||||
Sbjct 2443  CTGTCCCCCAGGCTGAAGTGCAGCGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGTGATTC  2516

Query   88  TTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA--TTTTGTATTTTTG  159
            |.||||||||||||||.||||||||||||.||.||.||..|||||||||.||.||||||  ||||||||||||.
Sbjct 2517  TCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCACCACACCTGGCTAATTTTTTGTATTTTTA  2590

Query  160  GTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGC  232
            ||..||||.|||||||.|||||||.|||||||||||||..||||||||||||||.|||||||||| .|||||||
Sbjct 2591  GTAAAGACAGGGTTTTACCATGTTGGTCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCGGC  2664

Query  233  CTCCCAAAGTGTTGAGA---------------------------------------------------------  249
            |||||||||||.||.||                                                         
Sbjct 2665  CTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTATTTCCCCACCTTTCGTGTAAGGTGCTA  2738

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2739  CTGAACATGACAGCTTCTTGTCATGACAGGAAACTTGCATCAGTTGGATATCCTTTTGAGAAACTGAATTTTGC  2812

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2813  AAAGGGCCAAATTTCCCCAAACTGAACGGGCTCAGGAAATGTTCCTTTACACTCAGAACATTCTATTTTAAGTA  2886

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2887  TATTATTTATTGTTGGCAGTTCCTCAGGGATTTCCCTTTTCTCTGTATTGGTCAGTGTAGTTGATGTAAAACCG  2960

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2961  TTTTGTGGATGGAAAATATTTTTATTTTATTGCTCTTTTAGTTTGGTAGGTTAAATAAAGGTTCTTGGTAATTT  3034

Query  250  ----  249
                
Sbjct 3035  GGGA  3038