Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_937969.2
- Aligned Length:
- 6183
- Identities:
- 215
- Gaps:
- 5941
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCTGGGATTACAAGTGTGAGCCATTGCTCCCGGCCCATATAGGATGGAGGTGAGCAATTTGGCAAGGAAGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTAAAAAGCACATAAGAACAGTATCAAGACCATTGGAATCAGATGACTTCCTGTCCAAGATTCCCAGCTGTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGTGCAAATAAGACTTGATAGTAGTGGAAAACAGGGACAAGAAGAGACTGTCTCTTTCTTCTCAGGTAGATCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCAAAACTGAAAGCCATTTTCAATCCTGCCACTTGCTCACTAAAGATTTAGGGTTTAGGTCCAAACCCTAAGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTGGATTCCTTATCTTCTCAAACATGCTCTTGTTTGCTTGATGCCTGGTTCGAGTGGCCAAGGCCGACATTCAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGACGTTGGTTAATCCCTAATTTCGCCAAACAATGACGGCCTAGGCTTTTCCGGCTTTTGAAACAGGAATTCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACACTAAAACGTGTGTTGATGGCATTTTGGGTTGGGGCTTTTCACAACTGATGACACTGGAAAAATAATCCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGAAACTACCTTATGAGACCCTAGATTTCGGTTTAGCAGTTCACCACAAAAGTGGTGAGGTGTTTTTTGGCTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAATTTTAGCTGCTTGCCTCTGTTTTTAGTTCGTGTGATTGCCTCCGCAAAGGCAGTGAATGGAGAATTCTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTAAGGTCAGCATTTAATTATTGCCTCACTCTGGCTGCTATAGTATTACAACTCTTGGAACTTACAGCATCGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTACTATTAAAGTTGCCTGGAGCATGCCAGCACGTTGGACATCGGCGTTCCAGCAACTGCCTCAGTCACTGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCGAGTGGGAGGCTCATTTTGCAGTTTACTATCTCCATGAGCAGGTCCAGGCGCGGGACCTGTTCTATGACTCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTGGGTCCTGCCCTTGTCCGTCATCGGAAGGCTTACAGCGCCTACTGTTTTGCAGTAAGATTTGCAGGCTTAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TACCGCCTCTGGAAACAAGGAGAGTGAAGGGGCGTTGACGAGTAACGTTGTTTGTATTTCTCTCCTCATTGGAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCTGCTGTGTCAGTCAGACACTTCTCTGCTTCCGTTGGCGGGAAGGCTTCAGGCGGGTAGCGGGGACTCGGTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGCCCCCTCCCAAGCTGGGAGCAGGGCGCGTGACGTCTCAGACATTTGTTGTTGGGATTTGGGCCTCATTAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTCATTAGGTACTTGAAAGCTCTGCAGGGATTGGTGGCTGAGAGGCCTAGTCGACTGTTTCTTAGCTAGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TACGTGTCACCCAGTACGCGGCTGGAGTTTTGCATAAATTATTCCGATAAGGAGCGGGGCGGGGCTCTGTGCAT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGATTAGTCAAATGAGCCTGGGAGGGAGGGAAGCCGGCTACGAATTAGCCTAAGTTATTAAAGATGGCGACGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCGCAGTCGCTCCGCGATGGACTCGCCGGTCCCGGCCTCTATGTTCGCCCCCGAGCCCAGCTCCCCGGGGGCGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAGGGCCGCGGCGGCCGCCGCCCGACTCCACGGCGGCTTTGACTCGGACTGCAGCGAGGACGGCGAGGCGCTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AACGGCGAGCCAGAGCTGGACCTCACCAGCAAGCTGGTTCTAGTGAGCCCTACATCAGAGCAGTATGACAGCCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACTTCGGCAGATGTGGGAGAGGATGGACGAGGGATGCGGAGAGACCATATATGTCATTGGGCAGGGATCAGATG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGACTGAGTATGGGCTGAGTGAAGCTGACATGGAGGCCTCCTACGCCACAGTGAAGAGCATGGCGGAACAGATA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGGCCGATGTCATCCTTCTGCGGGAACGGCAAGAAGCTGGGGGCCGCGTGCGTGATTACCTGGTCCGGAAACG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGTAGGAGACAATGACTTCCTGGAGGTCAGATGTATGGGTTCATCTACACGCAGGGTAGCAGTGGTGGGCAACG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGATGCTGGCAAAAGCACGCTTCTGGGGGTCCTGACACATGGGGAGCTGGACAATGGCCGAGGCTTTGCCCGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGAAACTCTTCCGCCACAAACATGAAATTGAATCTGGTCGCACCAGCAGTGTGGGCAACGACATTCTGGGCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGACAGTGAAGGCAATGTAGTGAACAAGCCTGACAGCCACGGCGGCAGCCTGGAGTGGACCAAGATCTGTGAGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGTCCACGAAAGTCATTACCTTCATCGACTTGGCTGGTCATGAGAAGTACCTGAAAACCACTGTCTTCGGCATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACAGGCCATCTGCCTGACTTCTGCATGCTCATGGTGGGCAGCAATGCTGGCATCGTGGGGATGACCAAAGAACA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCTGGGCTTGGCACTGGCACTCAATGTACCTGTCTTTGTGGTAGTCACCAAGATTGACATGTGTCCTGCCAACA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCTGCAAGAAACCCTGAAGCTGTTACAGCGCCTGCTGAAGTCACCAGGCTGCCGGAAGATCCCCGTGCTGGTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAGAGCAAAGATGATGTGATTGTCACAGCCTCCAACTTCAGCTCTGAAAGGATGTGCCCGATATTCCAGATCTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAACGTTACAGGCGAGAACCTAGATCTGCTGAAGATGTTCCTCAACCTCCTCTCCCCCCGCACCAGCTACAGGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGGAGGAGCCTGCTGAGTTTCAGATTGATGACACCTACTCCGTCCCGGGTGTGGGGACAGTGGTTTCGGGGACA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACACTGAGAGGCCTGATCAAGCTGAATGACACGCTGCTGCTGGGCCCAGACCCCTTGGGTAACTTCCTGTCCAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGCTGTCAAATCCATCCATCGCAAGCGCATGCCTGTCAAGGAGGTGCGGGGTGGCCAGACAGCATCCTTTGCGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGAAGAAGTGCACTGTGGGAGCATCAGGCAGACAGCCACCATTCTGAGCATGGACAAGGACTGTCTGCGCACTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGGACAAGGCCACTGTACACTTCCGCTTCATCAAGACCCCTGAGTACCTGCACATAGACCAGCGGCTGGTGTTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CGGGAAGGCCGCACCAAGGCTGTCGGCACCATCACCAAGCTCCTCCAGACCACCAACAACTCCCCAATGAACTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CAAGCCGCAGCAGATTAAAATGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGGGGGCCCGTCTG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GTGGGCCAGCAGTAGGAGCACCCCCACCTGGAGATGAAGCCTCCTCTGTAGGGGCAGGGCAACCAGCTGCGTCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGCAATCTCCAGCCTCAGCCTAAGCCCAGCAGTGGAGGCCGGCGACGAGGGGGCCAGCGCCACAAGGTGAAGTC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CCAGGGGGCCTGTGTGACTCCTGCCAGCGGCTGCTGAACCTTCCCCTGGCCCACCCTCACCACCCAAGGGGTCA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TCATCTCTGGCCACCACTCCACCAGATGGGCAGAGCAGCTATGACCGCCACCCAGCCCTCCCGCTCAGGCCACA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GCCGGAGCCTCCGCATTGCCCCCACCCCCATTTTCCAGGGGGGTTGTAATTTATAAGCTGACGAAGGTAGCCAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ACTTCCGGAGGACTGACCATCTCTCACTGTCCTCCCCACCTTCTTCCTCACTCACACATTTTTTGTACATCTGG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GCCCTTAGTTTTTATTCTGTTTATTATATGTCTCTGTCTCTCTCTATTGTGTGTGTGTGTGTGTGTGTGTGTGT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GTGTGTGTGTGTGGTGCAGGAGTGCCACCCCCAGGGCCCTGTCAACCTCTCTTTTCTCCTCCATGGCTGTCTGC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTGCGTATCTGTCTCTGAGAATCCTCGGGGCGGTCAGGGGATGTCAGGAGGGGAAGGAGCCGCCCTCCCTATCT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TGCTGCTCCTCTTGGCACTCAGGGGCACCTTCCATGGAGCCAGACCGGGTGGAGGGGCTTCTGGGATTTGGTGT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CTGCTGCTGCCAGAGCAGGAACCCCCAGTCTAGGACTTGGGCATTTTAACAGGGAGAAAGTAGTGGCTTCCCTT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTCTCTCTCTCCTCCTTTTTCCCTTTAAGCCCACAGATTCAGGTCATGCCAAAAGCTCTCTGGTTGTAACCTGG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 AGACATGTGGAGGGGAATGGCGATGGGATTATAGGACTCTCCCCATCTCGGGCCCTGACCCTGACCCTTGCCAC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CAACCCAAAGACAGCTGGTGGGTTTCCCCTTGGAGACAATCCTGCGTTTGCCTGGGCCGGCCCTGGCTGCCCTC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 AGCTTTCGCTGATCTGCCCGGCCTGGAGCCTCCCATCACCCCGCTTCTTGTTGGGCCTCAGGCACTGGTTACCA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GAAGGGGGTCTGGGTCTGCTCAGGATCATGTTTTGTAGCACCTCCTGTTGGAGGGGTGGAGGGATGTTCCCCTG 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AGCCAGGCTGAGACTAGAACCCCATCTTCCCTGAGCCAGGCTGAGACTAGAACCCCATCTTCCCCACCACGCCA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CCCCTGTGGCTGCTACAGGAGCACAGTAGTGAAGGCCTGAGCTCCAGGTTTGAAAGACCCAACTGGAGCGTGGG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GCGGGCAGGCAGGGGTTAGTGAAAGGACACTTCCAGGGTTAGGACAGAGCATTTAGCCTTCTGGAAGAACCCCT 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 GCCTGGGGTGGGACTGTGCAGGCCAGAGAAGGTGGCATGGGCCTGAACCCACCTGGACTGACTTCTGCACTGAA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GCCACAGATGGAGGGTAGGCTGGTGGGTGGGGGTGGTTCGTTCTCTAGCCGGGGCAGACACCCAGCTGGCTGGG 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 TCCTTCCTCAGCCTTGCCTCCTCCTGTCCCCAACCCTTTCCTTTCCTCCTGCTTGCGGACTGCTGGTCCCCTCT 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 CCTTCCCTCCTTCCAGCTGTTTCTAGTTACCACCTACCCCTGGCCGTGGACTGATCAGACCAGCATTCAAAATA 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 AAAGTTTGTTCCAAGTTGACAGTGTGGTGCTCCCTGCCCAGCCCCTCCAGGTGGAGGTGCTGCCACGGGAACGC 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 AGTTGCTCTGCCTGCCCTGGGGCCCCTGGCGACAGCTGGGAGCAGGGCAGTGCTGTGAGGAGCCCAGCTTTCCC 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 AGTCAGGCAGGCATGGCTTCCGTGTTCAGGCTCCCTCACCAGCTGGTGACACGGGACAAGCTTACAAACCTTCT 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 CTGAACCTCAGTTTTCTCATTTACAAGAGGCAAAGCCATCCATCACCTTGTGTGGATTCAGAGAATGTGAGGCC 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 CTGGGGTGTCCTACACAAGGGAAAGGCTTGCTCAGTGAGCGGTCTGCACACCGTTAGCCACCCTGCCACCTCTG 5180
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5181 TGCCCTGGGCAGGCTCCAAAGGAAAGCTCTGGCTGGGACTGCCAGGAGTCTCACACGCTCCTGTTGACATTCCC 5254
Query 1 -----------------------------------------------------ATGGAGTCTCGCTCTGTTGCC 21
|.|||||||||||.||||| |
Sbjct 5255 AGCAGCCGCCCCTGAGGTCGATGTTTGTTCTGTTTTTCTTTTTCTTTTTTGAGACGGAGTCTCGCTGTGTTG-C 5327
Query 22 CAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCT 95
||||||||||||||||||..|||||||.|||||||||||||||.||||.||||.||||||.||||| |||||||
Sbjct 5328 CAGGCTGGAGTGCAGTGGTGTGATCTCTGCTCACTGCAACCTCCGCCTGCCAGTTTCAAGTGATTC-TCTGCCT 5400
Query 96 CAGCCTCCAGAGTAGCTGGGACTATAGACATGCA--CCACCACGCCCGGCTAA--TTTTGTATTTTTGGTCGAG 165
||||||.|.|||||||||||||||.|| .|||| |||||||||||.||||| ||||||| ||||.||.|||
Sbjct 5401 CAGCCTTCTGAGTAGCTGGGACTACAG--GTGCACGCCACCACGCCCAGCTAACTTTTTGTA-TTTTAGTAGAG 5471
Query 166 ACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCA 238
||.||||||.|||||||..|.||||.|||||||||.|||||||||||| ||||||| ||.||||.||||||||
Sbjct 5472 ACAGGGTTTCGCCATGTCGGCCAGGGTGGTCTTGATCTCCTGACCTCA--TGATCCACCCGCCTCAGCCTCCCA 5543
Query 239 AAGTGTTGAGA--------------------------------------------------------------- 249
|||||.||.||
Sbjct 5544 AAGTGCTGGGATTACAGGTATGAGCCACCGCACCGGGCCTGTTCTATTTTTCTAGTTAAGGGAACTGAAGCTCA 5617
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5618 GAGAGGTGTCACCAGCAGGTGTTCATTCCCATGCCAGCCTTGCCCCCCGGCTTTTCCCAGGCAGGCTCCTGCGT 5691
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5692 GCCCACTGGCTCCAGCCTGGTCCTCTGTCTCTTGGCTGCTTCACTCCTGCTCTTTGTCCCGACTCTGGCCCTGC 5765
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5766 TTACAGGGGCCACTACCTGCTGGTGCCTCCATAACAAGCGTCTGGCGTTGAGACCCCTGGCATGGCAGGGGCTT 5839
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5840 TGGGGTCTGGTTTCCACAAGGCTTAGCCATGGCAGAACCTCGTTTTATTTTAACTCTTTGCCCCTACAAACAAA 5913
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5914 CAGCAGTACTTGCCAGAACCATTCTTGGGATTCAGGAGCTCGGGCGACTGCCTTGGCCTCTGGCCGCACCCAGG 5987
Query 250 -------------------------------------------------------------------------- 249
Sbjct 5988 AGGGTGGGGTTGGATCTGTGTAGTTGCCAGGCCCACACCTGCCAGCAGGGGGCTGACTGGATCCATGCTTTACT 6061
Query 250 -------------------------------------------------------------------------- 249
Sbjct 6062 GTGTTTAATGGGGGTAACAGGGGTCCCTACAGCCCTCCCAGCTAAACATTTGGAACAAAACACCAGCCCTTTTG 6135
Query 250 ----------------------------------------- 249
Sbjct 6136 TAGTGGATGCAGAATAAAATTGTTAATCCAATCACCTCCAA 6176
