Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10793
- Subject:
- XR_001743195.2
- Aligned Length:
- 4769
- Identities:
- 399
- Gaps:
- 4370
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGCGCCGGGCGGGGAGGAGAGAAGGAGGAGAGACTTGGAAACTCCGACTGCAAATAATAAAGAAATTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACAATACATTAATATACCATAACACTAAAAAGAGCAGGAGCGAGAGATGAGAAAGGGAATCCAGCCCGCTCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGCAGTACCTGGTGACCGCCGGGGGTGGGGAGGGGGCGGCTGTCGTCGCCGCCGCCGCTGCAGCCTCCATGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAAAGGGCACTGCTAGCCAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACATCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGATCCTCACCACGAACACTTCCACCACCTCCTGTTCCTCCTCCCTCCAAAGCGGCGCCGTAGCCGCCGGCCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCCTCCCCAGTGCCCCCGGCGCGGAGCAGACCGCCGGCAGCCTCCTCTACACCACGCCGCACGGACCCTCCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGAGCCGGGCTGCTGCAGCAGCCACCAGCGCTGGGACGCGGCGGCAGCGGCGGCGGCGGCGGCCCTCCGGCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCGAAGGCTGGAGCTAGGAGAAAGCGGTCATCAGTACCTCTCAGATGGTTTAAAAACCCCCAAGGGCAAAGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGCTGCACTACGAAGTCCAGATAGTCCAAAAACTCCAAAATCTCCCTCAGAAAAAACGCGGTATGATACGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTTGGTCTGCTCACCAAGAAGTTCATTCAGCTCCTGAGCCAGTCACCCGATGGGGTATTGGATTTGAACAAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGCAGAAGTGCTAAAAGTGCAAAAGAGAAGGATTTATGATATCACCAACGTTCTGGAAGGCATCCACCTCATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGAAGAAGTCTAAAAACAACGTCCAATGGATGGGCTGCAGTCTGTCTGAGGATGGGGGCATGCTGGCCCAGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAAGGCCTGTCAAAAGAAGTGACCGAGCTCAGTCAGGAAGAGAAGAAATTAGATGAACTGATCCAAAGCTGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCTGGACCTCAAACTGTTAACCGAGGATTCAGAGAATCAAAGATATCCTTTGTGCCGCCAGTTCTCTGGGGGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAGTGCTTCCTAGACTATTTCCAGAGTTGACAATCTGACTTATGCACAAGAGCCTACAAATACATTTGGCAAGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACCCAAGGGCCCATTGAGGTTTACTTATGTCCAGAAGAGACTGAAACACACAGTCCAATGAAAACAAACAACCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGACCACAATGGGAATATCCCTAAACCCGCTTCCAAAGACTTGGCTTCAACCAACTCAGGACATAGCGATTGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGTTTCTATGGGAAACCTTTCTCCTCTGGCCTCCCCAGCCAACCTCTTACAGCAGACTGAGGACCAAATTCCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCCAACCTAGAAGGACCGTTTGTGAACTTACTGCCTCCCCTGCTGCAAGAGGACTATCTCCTGAGCCTCGGGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGAGGAAGGCATCAGCGATCTCTTCGATGCTTACGATTTGGAAAAGCTCCCACTGGTGGAAGACTTCATGTGTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTTGATTATGCTTCGTGTGAACTCTCCTTAAAAACCGATATTTTTTTATCATGGAACCAGAACATCTGTCATGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTGTTGTCCCTTCCTACCTTCTTCCTCCAAGAGAGTATCATGAAGTAAACTACAAACTTCAGAAGAAAGCTGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATTTTAATGAATTTTTTAAAAAATTAATAAACAAATTGTCTAAACGCACAGTTGCAGGCTCCCTTGGGAAAGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGCTTTGCTCCAGGCTCCAAGATCTCCTGGCTAAGTCAGCAAGTGAGAAAATGTGCAATCAGGTGTCTCTCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCCCGAATTGTCCTTCCTCCTTCCTCCCCGGATTGGCTTGCTGTGCCTGACGGATGGGCTGTAGAATGGGGTCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGCCACCTGGCCTGCTGGGAAACAGCAATCTTCCTTAATAGCATTTCAAGCCGTGCCTTCTCCGCAGAATGCAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTCTTTGAGGTCTGCTAATATGGAATGGAACTGCAGCAAATGCAAACTTGAAGTCATGCAAAAGTATGAAATGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTTCTTCAGCTCTTCTTAGGAATATTTAAATTACTGTCATAATTCAGTTTAAGCTATGAACTGTGTGTCCCAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGGAGGTCAAGAAAACCTCCACAGCCTTCTGGATGAAGAACCTGTTTTCAAATATACTTGTTGCAGATACAGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGACTAGTAGAGTTCTGCCACTCTAAGCTGTTGTGGATTTTCCTGTCTCCATGAACCACTCCCATTCCCCCGTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCCAATGTGTTTGTGAGTTTCCAGTTGATTTGTAGCAAATGCCTACTTAGTTCTTTGTGGATTGTTCTAGACTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTAATTTTTTTAGCTGCCATTTAAGCATTCCTGTGGCACCCATCACCATTTCAATTTAATTGTTTACTTTGAAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CGGTTTTTGCAAATTCATATTACTTAAGCAGAGGGAGAGAACCTCTACTGATCAGAGCATCTAAACCTGTGTGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCTAAGGTTTATCAGCCTCTGCAAGGAGCTTTGTCCCATCGTGCTTCCATTCCCAGGAGGGGGAGCTTGGAGCG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGTCAGTCCTGGGGCTTGCTGACATGGGTGGCCCATTGGAAAGGAGAACCAGGTCAGATGATGTAACAGCCCCA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGGAGCAGCAGGCATGGGTCCCTCCATCCTTGGGCTTCCCGGGCCCCTGTGACAGGGGAAAGGGCTCTCTTACA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCGCACTCAGGGAGACCACTTCTCAGGATGGGGTCAGATGGAGAGACCTCTAGGGAGAAAGACATCCCCATTGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GTGAGTGGCATTTCCTTAAGCTGGCAGGAACAGGGAGCAGCCCTGTGTCGGGGGCTGGAATAGTTCTGGCCAGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCCCGTTCCCCTTCCTCTATGAAGGAATAAGTTGGACCAAGGGAAGTCGGGGACGTAAAAAATGAAGCAAAACA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ATGCCAGGGTGTCTCCCGCTTTACTCTTCAGGAATGGTGTCCCAAGTTGGAGGCTTTGTGTCAGCTGCAAATCC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TACCAGTTATGTCCAAGAATGGCTTTCCCTCGGGCAGGTGGCAGCGGCCATCTCCCACTGGGAATATGGCGTAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TATCTCCGGTCCATTCCTTGGATGCTAAGGACTGCGGGAATGAGGGAGTCAGATAAAGAACAAACCTCGAAACG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AACAGTTAAATTGAAATGCTATGTGCCTGACCCAATGGTAGGCACATAGTAGGCACTCAACTCATATGTTTAAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGAATTGAAAATATCCCTTAGGAAAAAAAAAAAACACACAAAAAACCACAAGAGCCCCAGCCAGTTTACTCCAG 3256
Query 1 ---------------ATGCAAAGTGGTGGTGGGGTCAAGACAGATGACACCAGCACTTTAAACTCTTTGTGTGG 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 GTAGATTTCCACAATATGCAAAGTGGTGGTGGGGTCAAGACAGATGACACCAGCACTTTAAACTCTTTGTGTGG 3330
Query 60 GTATGCGTGGGTGTATGTTTGGGAAGAAAAACAAAGGTGCAGACTATCTTCCTTTTTTTCTTCTTCAGCCTCCA 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GTATGCGTGGGTGTATGTTTGGGAAGAAAAACAAAGGTGCAGACTATCTTCCTTTTTTTCTTCTTCAGCCTCCA 3404
Query 134 TCCCTGGCCTCCTCCCCTCACACACACTGGACTTGGTACAAAATGTCGGTGTGGTCCTAGATGAAGCATTGGGG 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 TCCCTGGCCTCCTCCCCTCACACACACTGGACTTGGTACAAAATGTCGGTGTGGTCCTAGATGAAGCATTGGGG 3478
Query 208 TGGGGGAGGGAGAGGGAGCTTTGTGTTAAGTGCCTACTGGAAATGCACTGTGGGGTTTTTTCCTGTATGGGAAA 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 TGGGGGAGGGAGAGGGAGCTTTGTGTTAAGTGCCTACTGGAAATGCACTGTGGGGTTTTTTCCTGTATGGGAAA 3552
Query 282 CCATTTATGCCAAGCTTTTCCCCATTTCCCATATTTATCTCATCTGGTTAGCTGCCTCTGCTTCCAGCTTTGTG 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 CCATTTATGCCAAGCTTTTCCCCATTTCCCATATTTATCTCATCTGGTTAGCTGCCTCTGCTTCCAGCTTTGTG 3626
Query 356 TAATTCTCTTTGCCAGCTGCACAAAGCTGATTTTTTCCAAAGTC------------------------------ 399
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 TAATTCTCTTTGCCAGCTGCACAAAGCTGATTTTTTCCAAAGTCTAAAGACTGAGCTCACCTGGCTAGATTGTT 3700
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3701 GTGTGTTTTGTTGAATTTTTTCATAATGTAATGCCGTATTTATTGTTTTTAAAATGAAAGGAATACTAATAAGT 3774
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3775 CTTAAAAGTTCCTTCATGCATAAGATTTTTTTCCAGTTACTGGGTTTAACTGGTGTACATTAATTAGATGTCCA 3848
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3849 TACTGTATTTTGTTTGCATTAAGTAATTTTCTTTTTGACTTAGTATCCGGCACACAAAGTGGGTTAGTACTACA 3922
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3923 GTATTTGCGTTACTTTAAGTACTAAGTATGCAGGTTTCCTGGTACCATTGAGTTGCTGCTATTAAAGCTCACAC 3996
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3997 ACGAAATGGCTAAAAGTTACAAGTGTGCAAATTATGACTGCGTGAGCCTTAGAAAATAAAATGTATAAAGGGCA 4070
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4071 ACACATGAGCTGTCAAACAGTGTTAGGAGTGTGTTTATATGTACAGAGTTGTGCATAGCAATCGTTTTATTTAA 4144
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4145 GTTGATATGTAGTCTACTCACATTTTCATTATTTAGCAATTTTGTACAAAAATAGCAATTAATTTGTAAACACT 4218
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4219 GCCAGAATACTTTCTAGCTGCTTTGTAATTTTTTAAGAGTGTTATTTTGTTTTTGTTTTTCTGTTCTTTGTTGT 4292
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4293 GGCTCTTGTTTTCATTTTTGTTGTACGTGTAGATCTGTAAATAAAATTGCAGTATTTAAAGCTTAAGCTTTCAG 4366
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4367 GAAAAAGAAAATAAGAATTCAGTGTGTGCATGACAACTCGTGTGTATGAGAAGGAGGGATATGAAGGAAGATGG 4440
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4441 CTTGCAGAGTAAGTCGGGTGGCAATTGTCAGGGTGTGGGAATTTCTTTTCCTACGGGGTACGTGATTTTGTAAA 4514
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4515 AAGGAAGTATTTCTCCCAAAATTGGGAGTAGGCAAACTACTAATCAGTTTAGCTTTGTGTTGTATGCTAGTTTA 4588
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4589 AAAAAGAAAATATGTAATATAATGTAAAAAAAAACAAAAAAAAGCTTTTATGATGGATTTTGTAAATAGATTTG 4662
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4663 TTACAGGGTGACCTGTTCTCTAGCTGTGATCTTACCACTTCAAATGGGTGTAATTTGAATAAATTTTGTATGGT 4736
Query 400 --------------------------------- 399
Sbjct 4737 AAAGGATCAATAAAATGATTTTTTTTAAGAGTT 4769
