Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10793
- Subject:
- XR_002956265.1
- Aligned Length:
- 4529
- Identities:
- 399
- Gaps:
- 4130
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGCGCCGGGCGGGGAGGAGAGAAGGAGGAGAGACTTGGAAACTCCGACTGCAAATAATAAAGAAATTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACAATACATTAATATACCATAACACTAAAAAGAGCAGGAGCGAGAGATGAGAAAGGGAATCCAGCCCGCTCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGCAGTACCTGGTGACCGCCGGGGGTGGGGAGGGGGCGGCTGTCGTCGCCGCCGCCGCTGCAGCCTCCATGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAAAAGGGCACTGCTAGCCAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACATCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGATCCTCACCACGAACACTTCCACCACCTCCTGTTCCTCCTCCCTCCAAAGCGGCGCCGTAGCCGCCGGCCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCCTCCCCAGTGCCCCCGGCGCGGAGCAGACCGCCGGCAGCCTCCTCTACACCACGCCGCACGGACCCTCCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGAGCCGGGCTGCTGCAGCAGCCACCAGCGCTGGGACGCGGCGGCAGCGGCGGCGGCGGCGGCCCTCCGGCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCGAAGGCTGGAGCTAGGAGAAAGCGGTCATCAGTACCTCTCAGATGGTTTAAAAACCCCCAAGGGCAAAGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGCTGCACTACGAAGTCCAGATAGTCCAAAAACTCCAAAATCTCCCTCAGAAAAAACGCGGTATGATACGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTTGGTCTGCTCACCAAGAAGTTCATTCAGCTCCTGAGCCAGTCACCCGATGGGGTATTGGATTTGAACAAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGCAGAAGTGCTAAAAGTGCAAAAGAGAAGGATTTATGATATCACCAACGTTCTGGAAGGCATCCACCTCATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGAAGAAGTCTAAAAACAACGTCCAATGGATAGCCTACAAATACATTTGGCAAGTACCCAAGGGCCCATTGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTTACTTATGTCCAGAAGAGACTGAAACACACAGTCCAATGAAAACAAACAACCAAGACCACAATGGGAATAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCTAAACCCGCTTCCAAAGACTTGGCTTCAACCAACTCAGGACATAGCGATTGCTCAGTTTCTATGGGAAACC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTCTCCTCTGGCCTCCCCAGCCAACCTCTTACAGCAGACTGAGGACCAAATTCCTTCCAACCTAGAAGGACCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTGTGAACTTACTGCCTCCCCTGCTGCAAGAGGACTATCTCCTGAGCCTCGGGGAGGAGGAAGGCATCAGCGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTCTTCGATGCTTACGATTTGGAAAAGCTCCCACTGGTGGAAGACTTCATGTGTAGTTGATTATGCTTCGTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAACTCTCCTTAAAAACCGATATTTTTTTATCATGGAACCAGAACATCTGTCATGCAGTGTTGTCCCTTCCTAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTCTTCCTCCAAGAGAGTATCATGAAGTAAACTACAAACTTCAGAAGAAAGCTGACATTTTAATGAATTTTTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAAAAATTAATAAACAAATTGTCTAAACGCACAGTTGCAGGCTCCCTTGGGAAAGCCCTGCTTTGCTCCAGGCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAAGATCTCCTGGCTAAGTCAGCAAGTGAGAAAATGTGCAATCAGGTGTCTCTCACCCCGAATTGTCCTTCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTTCCTCCCCGGATTGGCTTGCTGTGCCTGACGGATGGGCTGTAGAATGGGGTCTGGCCACCTGGCCTGCTGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAAACAGCAATCTTCCTTAATAGCATTTCAAGCCGTGCCTTCTCCGCAGAATGCATGTCTTTGAGGTCTGCTAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TATGGAATGGAACTGCAGCAAATGCAAACTTGAAGTCATGCAAAAGTATGAAATGGATTTCTTCAGCTCTTCTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGAATATTTAAATTACTGTCATAATTCAGTTTAAGCTATGAACTGTGTGTCCCAGTAGGAGGTCAAGAAAACC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCCACAGCCTTCTGGATGAAGAACCTGTTTTCAAATATACTTGTTGCAGATACAGAAGACTAGTAGAGTTCTGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CACTCTAAGCTGTTGTGGATTTTCCTGTCTCCATGAACCACTCCCATTCCCCCGTCCCCAATGTGTTTGTGAGT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTCCAGTTGATTTGTAGCAAATGCCTACTTAGTTCTTTGTGGATTGTTCTAGACTTTTAATTTTTTTAGCTGCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATTTAAGCATTCCTGTGGCACCCATCACCATTTCAATTTAATTGTTTACTTTGAAGCGGTTTTTGCAAATTCAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATTACTTAAGCAGAGGGAGAGAACCTCTACTGATCAGAGCATCTAAACCTGTGTGATCTAAGGTTTATCAGCCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTGCAAGGAGCTTTGTCCCATCGTGCTTCCATTCCCAGGAGGGGGAGCTTGGAGCGAGTCAGTCCTGGGGCTTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTGACATGGGTGGCCCATTGGAAAGGAGAACCAGGTCAGATGATGTAACAGCCCCAAGGAGCAGCAGGCATGGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCCTCCATCCTTGGGCTTCCCGGGCCCCTGTGACAGGGGAAAGGGCTCTCTTACACCGCACTCAGGGAGACCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTTCTCAGGATGGGGTCAGATGGAGAGACCTCTAGGGAGAAAGACATCCCCATTGTGTGAGTGGCATTTCCTTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGCTGGCAGGAACAGGGAGCAGCCCTGTGTCGGGGGCTGGAATAGTTCTGGCCAGACCCCGTTCCCCTTCCTCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATGAAGGAATAAGTTGGACCAAGGGAAGTCGGGGACGTAAAAAATGAAGCAAAACAATGCCAGGGTGTCTCCCG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTTTACTCTTCAGGAATGGTGTCCCAAGTTGGAGGCTTTGTGTCAGCTGCAAATCCTACCAGTTATGTCCAAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATGGCTTTCCCTCGGGCAGGTGGCAGCGGCCATCTCCCACTGGGAATATGGCGTAGTATCTCCGGTCCATTCCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGGATGCTAAGGACTGCGGGAATGAGGGAGTCAGATAAAGAACAAACCTCGAAACGAACAGTTAAATTGAAATG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTATGTGCCTGACCCAATGGTAGGCACATAGTAGGCACTCAACTCATATGTTTAATTGAATTGAAAATATCCCT 2960
Query 1 -----------------------------------------------------------------------ATG 3
|||
Sbjct 2961 TAGGAAAAAAAAAAAACACACAAAAAACCACAAGAGCCCCAGCCAGTTTACTCCAGGTAGATTTCCACAATATG 3034
Query 4 CAAAGTGGTGGTGGGGTCAAGACAGATGACACCAGCACTTTAAACTCTTTGTGTGGGTATGCGTGGGTGTATGT 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CAAAGTGGTGGTGGGGTCAAGACAGATGACACCAGCACTTTAAACTCTTTGTGTGGGTATGCGTGGGTGTATGT 3108
Query 78 TTGGGAAGAAAAACAAAGGTGCAGACTATCTTCCTTTTTTTCTTCTTCAGCCTCCATCCCTGGCCTCCTCCCCT 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 TTGGGAAGAAAAACAAAGGTGCAGACTATCTTCCTTTTTTTCTTCTTCAGCCTCCATCCCTGGCCTCCTCCCCT 3182
Query 152 CACACACACTGGACTTGGTACAAAATGTCGGTGTGGTCCTAGATGAAGCATTGGGGTGGGGGAGGGAGAGGGAG 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 CACACACACTGGACTTGGTACAAAATGTCGGTGTGGTCCTAGATGAAGCATTGGGGTGGGGGAGGGAGAGGGAG 3256
Query 226 CTTTGTGTTAAGTGCCTACTGGAAATGCACTGTGGGGTTTTTTCCTGTATGGGAAACCATTTATGCCAAGCTTT 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CTTTGTGTTAAGTGCCTACTGGAAATGCACTGTGGGGTTTTTTCCTGTATGGGAAACCATTTATGCCAAGCTTT 3330
Query 300 TCCCCATTTCCCATATTTATCTCATCTGGTTAGCTGCCTCTGCTTCCAGCTTTGTGTAATTCTCTTTGCCAGCT 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 TCCCCATTTCCCATATTTATCTCATCTGGTTAGCTGCCTCTGCTTCCAGCTTTGTGTAATTCTCTTTGCCAGCT 3404
Query 374 GCACAAAGCTGATTTTTTCCAAAGTC------------------------------------------------ 399
||||||||||||||||||||||||||
Sbjct 3405 GCACAAAGCTGATTTTTTCCAAAGTCTAAAGACTGAGCTCACCTGGCTAGATTGTTGTGTGTTTTGTTGAATTT 3478
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3479 TTTCATAATGTAATGCCGTATTTATTGTTTTTAAAATGAAAGGAATACTAATAAGTCTTAAAAGTTCCTTCATG 3552
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3553 CATAAGATTTTTTTCCAGTTACTGGGTTTAACTGGTGTACATTAATTAGATGTCCATACTGTATTTTGTTTGCA 3626
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3627 TTAAGTAATTTTCTTTTTGACTTAGTATCCGGCACACAAAGTGGGTTAGTACTACAGTATTTGCGTTACTTTAA 3700
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3701 GTACTAAGTATGCAGGTTTCCTGGTACCATTGAGTTGCTGCTATTAAAGCTCACACACGAAATGGCTAAAAGTT 3774
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3775 ACAAGTGTGCAAATTATGACTGCGTGAGCCTTAGAAAATAAAATGTATAAAGGGCAACACATGAGCTGTCAAAC 3848
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3849 AGTGTTAGGAGTGTGTTTATATGTACAGAGTTGTGCATAGCAATCGTTTTATTTAAGTTGATATGTAGTCTACT 3922
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3923 CACATTTTCATTATTTAGCAATTTTGTACAAAAATAGCAATTAATTTGTAAACACTGCCAGAATACTTTCTAGC 3996
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3997 TGCTTTGTAATTTTTTAAGAGTGTTATTTTGTTTTTGTTTTTCTGTTCTTTGTTGTGGCTCTTGTTTTCATTTT 4070
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4071 TGTTGTACGTGTAGATCTGTAAATAAAATTGCAGTATTTAAAGCTTAAGCTTTCAGGAAAAAGAAAATAAGAAT 4144
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4145 TCAGTGTGTGCATGACAACTCGTGTGTATGAGAAGGAGGGATATGAAGGAAGATGGCTTGCAGAGTAAGTCGGG 4218
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4219 TGGCAATTGTCAGGGTGTGGGAATTTCTTTTCCTACGGGGTACGTGATTTTGTAAAAAGGAAGTATTTCTCCCA 4292
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4293 AAATTGGGAGTAGGCAAACTACTAATCAGTTTAGCTTTGTGTTGTATGCTAGTTTAAAAAAGAAAATATGTAAT 4366
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4367 ATAATGTAAAAAAAAACAAAAAAAAGCTTTTATGATGGATTTTGTAAATAGATTTGTTACAGGGTGACCTGTTC 4440
Query 400 -------------------------------------------------------------------------- 399
Sbjct 4441 TCTAGCTGTGATCTTACCACTTCAAATGGGTGTAATTTGAATAAATTTTGTATGGTAAAGGATCAATAAAATGA 4514
Query 400 --------------- 399
Sbjct 4515 TTTTTTTTAAGAGTT 4529
