Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10854
- Subject:
- NM_002078.5
- Aligned Length:
- 6691
- Identities:
- 494
- Gaps:
- 6194
Alignment
Query 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
Query 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
Query 149 CACCCAATAGAGAGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGGTGCCCTCCGTGGAGTCT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CACCCAATAGAGAGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGGTGCCCTCCGTGGAGTCT 222
Query 223 TTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTGGTACGAACATCTTCCAG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTGGTACGAACATCTTCCAG 296
Query 297 AGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTCTGATATGGATAGCGAGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTCTGATATGGATAGCGAGG 370
Query 371 CTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGTTGCGAAGAATGGAACGA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGTTGCGAAGAATGGAACGA 444
Query 445 AGCTTAAGTAGCTACAGGGGAAAATATTCTGAGTCATG-----GC---TCCGAT-CTTC--------------- 494
||||||||||||||||||||||||||||||||| |.|| || ||.||| ||||
Sbjct 445 AGCTTAAGTAGCTACAGGGGAAAATATTCTGAG-CTTGTTACAGCTTATCAGATGCTTCAGAGAGAGAAGAAAA 517
Query 495 ATCT---------------------------------------------------------------------- 498
|.||
Sbjct 518 AGCTACAAGGTATATTAAGTCAGAGTCAGGATAAATCACTTCGGAGAATAGCAGAATTAAGAGAGGAGCTCCAA 591
Query 499 -------------------------------------------------------------------------- 498
Sbjct 592 ATGGACCAGCAGGCAAAGAAACATCTGCAAGAGGAGTTTGATGCATCTTTAGAGGAGAAAGATCAGTATATCAG 665
Query 499 -------------------------------------------------------------------------- 498
Sbjct 666 TGTTCTCCAAACTCAGGTTTCTCTACTGAAACAACGATTACGAAATGGCCCGATGAATGTTGATGTACTGAAAC 739
Query 499 -------------------------------------------------------------------------- 498
Sbjct 740 CACTTCCTCAGCTGGAACCACAGGCTGAAGTCTTCACTAAAGAAGAGAATCCAGAAAGTGATGGAGAGCCAGTA 813
Query 499 -------------------------------------------------------------------------- 498
Sbjct 814 GTGGAAGATGGAACTTCTGTAAAAACACTGGAAACACTCCAGCAAAGAGTGAAGCGTCAAGAGAACCTACTTAA 887
Query 499 -------------------------------------------------------------------------- 498
Sbjct 888 GCGTTGTAAGGAAACAATTCAGTCACATAAGGAACAATGTACACTATTAACTAGTGAAAAAGAAGCTCTGCAAG 961
Query 499 -------------------------------------------------------------------------- 498
Sbjct 962 AACAACTGGATGAAAGACTTCAAGAACTAGAAAAGATAAAGGACCTTCATATGGCCGAGAAGACTAAACTTATC 1035
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1036 ACTCAGTTGCGTGATGCAAAGAACTTAATTGAACAGCTTGAACAAGATAAGGGAATGGTAATCGCAGAGACAAA 1109
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1110 ACGTCAGATGCATGAAACCCTGGAAATGAAAGAAGAAGAAATTGCTCAACTCCGTAGTCGCATCAAACAGATGA 1183
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1184 CTACCCAGGGAGAGGAATTACGGGAACAGAAAGAAAAGTCCGAAAGAGCTGCTTTTGAGGAACTTGAAAAAGCT 1257
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1258 TTGAGTACAGCCCAAAAAACAGAGGAAGCACGGAGAAAACTGAAGGCAGAAATGGATGAACAAATAAAAACTAT 1331
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1332 CGAAAAAACAAGTGAGGAGGAACGCATCAGTCTTCAACAGGAATTAAGTCGGGTGAAACAGGAGGTTGTTGATG 1405
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1406 TAATGAAAAAATCCTCAGAAGAACAAATTGCTAAGCTACAGAAGCTTCATGAAAAGGAGCTGGCCAGAAAAGAG 1479
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1480 CAGGAACTGACCAAGAAGCTTCAGACCCGAGAAAGGGAATTTCAGGAACAAATGAAAGTAGCTCTTGAAAAGAG 1553
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1554 TCAATCAGAATATTTGAAGATCAGCCAAGAAAAAGAACAGCAAGAATCTTTGGCCCTAGAAGAGTTAGAGTTGC 1627
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1628 AGAAAAAAGCAATCCTCACAGAAAGTGAAAATAAACTTCGGGACCTTCAGCAAGAAGCAGAGACTTACAGAACT 1701
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1702 AGAATTCTTGAATTGGAAAGTTCTTTGGAAAAAAGCTTACAAGAAAACAAAAATCAGTCAAAAGATTTGGCTGT 1775
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1776 TCATCTGGAAGCTGAAAAAAATAAGCACAATAAGGAGATTACAGTCATGGTTGAAAAACACAAGACAGAATTGG 1849
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1850 AAAGCCTTAAGCATCAGCAGGATGCCCTTTGGACTGAAAAACTCCAAGTCTTAAAGCAACAATATCAGACTGAA 1923
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1924 ATGGAAAAACTTAGGGAAAAGTGTGAACAAGAAAAAGAAACATTGTTGAAAGACAAAGAGATTATCTTCCAGGC 1997
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1998 CCACATAGAAGAAATGAATGAAAAGACTTTAGAAAAGCTTGATGTGAAGCAAACAGAACTAGAATCATTATCTT 2071
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2072 CTGAACTGTCAGAAGTATTAAAAGCCCGTCACAAACTAGAAGAGGAACTTTCTGTTCTGAAAGATCAAACAGAT 2145
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2146 AAAATGAAGCAGGAATTAGAGGCCAAGATGGATGAACAGAAAAATCATCACCAGCAGCAAGTTGACAGTATCAT 2219
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2220 TAAAGAACACGAGGTATCTATCCAGAGGACTGAGAAGGCATTAAAAGATCAAATTAATCAACTTGAGCTTCTCT 2293
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2294 TGAAGGAAAGGGACAAGCATTTGAAAGAGCATCAGGCTCATGTAGAAAATTTAGAGGCAGATATTAAAAGGTCT 2367
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2368 GAAGGGGAACTCCAGCAGGCATCTGCTAAGCTGGACGTTTTTCAGTCTTACCAGAGTGCCACACATGAGCAGAC 2441
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2442 AAAAGCATATGAGGAACAGTTGGCCCAATTGCAGCAGAAGTTGTTGGATTTGGAAACAGAAAGAATTCTTCTTA 2515
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2516 CCAAACAGGTTGCTGAAGTTGAAGCACAAAAGAAAGATGTTTGTACTGAGTTAGATGCTCACAAAATCCAGGTG 2589
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2590 CAGGACTTAATGCAGCAACTTGAAAAACAAAATAGTGAAATGGAGCAAAAAGTAAAATCTTTAACCCAAGTCTA 2663
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2664 TGAGTCCAAACTTGAAGATGGTAACAAAGAACAGGAACAGACAAAGCAAATCTTGGTGGAAAAGGAAAATATGA 2737
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2738 TTTTACAAATGAGAGAAGGACAGAAGAAAGAAATTGAGATACTCACACAGAAATTGTCAGCCAAGGAGGACAGT 2811
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2812 ATTCATATTTTGAATGAGGAATATGAAACCAAATTTAAAAACCAAGAAAAAAAGATGGAAAAAGTTAAGCAGAA 2885
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2886 AGCAAAGGAGATGCAAGAAACGTTAAAGAAAAAATTACTGGATCAGGAAGCCAAACTTAAGAAAGAGCTTGAAA 2959
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2960 ATACTGCTCTAGAGCTTAGTCAGAAAGAAAAACAGTTTAATGCCAAAATGCTGGAAATGGCACAGGCTAACTCA 3033
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3034 GCTGGAATCAGTGATGCAGTGTCAAGACTGGAAACAAACCAAAAAGAACAAATAGAAAGTCTTACTGAGGTTCA 3107
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3108 TCGACGAGAACTCAATGATGTCATATCAATCTGGGAAAAGAAACTTAATCAGCAAGCTGAAGAACTTCAGGAAA 3181
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3182 TACATGAAATCCAATTACAGGAAAAAGAACAAGAGGTAGCAGAACTGAAACAAAAGATCCTCCTATTTGGGTGT 3255
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3256 GAAAAAGAAGAGATGAACAAGGAAATAACATGGCTGAAGGAAGAAGGTGTTAAGCAGGATACAACATTAAATGA 3329
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3330 ATTACAGGAACAGTTAAAGCAGAAGTCTGCCCATGTGAATTCTCTTGCACAAGATGAAACTAAACTGAAAGCTC 3403
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3404 ATCTTGAAAAGCTAGAGGTTGACTTGAATAAGTCTCTGAAGGAAAATACTTTTCTTCAAGAGCAGCTAGTTGAA 3477
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3478 CTGAAGATGCTGGCAGAAGAAGATAAGCGGAAGGTTTCTGAGTTGACTAGCAAGTTGAAAACCACAGATGAAGA 3551
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3552 ATTCCAGAGTTTGAAATCTTCACATGAAAAAAGTAACAAAAGCCTAGAGGACAAGAGCTTGGAATTTAAAAAAC 3625
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3626 TGTCTGAGGAACTAGCGATTCAGCTAGATATTTGCTGTAAGAAAACCGAAGCCTTATTAGAAGCTAAAACAAAT 3699
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3700 GAGCTAATCAACATTAGTAGTAGTAAAACTAATGCCATTCTTTCTAGGATTTCTCATTGTCAGCACCGTACAAC 3773
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3774 TAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCACAGTTTCTGAATTAGAAGCACAACTTAGACAGTTGACAG 3847
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3848 AGGAGCAAAATACACTAAATATTTCTTTTCAACAGGCTACTCATCAGTTAGAAGAAAAAGAAAATCAAATTAAG 3921
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3922 AGCATGAAGGCTGATATTGAAAGTCTTGTAACAGAAAAAGAAGCCTTACAGAAGGAAGGAGGCAATCAGCAACA 3995
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3996 GGCTGCTTCTGAAAAGGAGTCTTGTATAACACAGTTGAAGAAAGAGTTATCTGAAAACATCAATGCTGTCACAT 4069
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4070 TGATGAAAGAAGAGCTTAAAGAAAAAAAAGTTGAGATTAGCAGTCTTAGTAAACAACTAACTGATTTGAATGTT 4143
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4144 CAGCTTCAAAATAGCATCAGCCTATCCGAAAAAGAAGCAGCCATTTCATCACTAAGAAAGCAGTATGATGAAGA 4217
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4218 AAAATGTGAATTGCTGGATCAGGTGCAAGATTTATCTTTTAAAGTTGACACTCTGAGTAAAGAGAAAATTTCTG 4291
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4292 CTCTTGAGCAGGTAGATGACTGGTCCAATAAATTCTCAGAATGGAAGAAGAAAGCACAGTCAAGATTTACACAG 4365
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4366 CATCAAAACACTGTTAAAGAATTGCAGATCCAGCTTGAGTTAAAATCAAAGGAAGCTTATGAAAAGGATGAGCA 4439
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4440 GATAAATTTATTGAAGGAAGAGCTTGATCAGCAAAATAAAAGATTTGATTGTTTAAAGGGTGAAATGGAAGACG 4513
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4514 ACAAGAGCAAGATGGAGAAAAAGGAGTCTAATTTAGAAACAGAGTTAAAGTCTCAAACAGCAAGAATTATGGAA 4587
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4588 TTAGAGGACCATATTACCCAGAAAACTATTGAAATAGAGTCCTTAAATGAAGTTCTTAAAAATTACAATCAACA 4661
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4662 AAAGGATATTGAACACAAAGAATTGGTTCAGAAACTTCAACATTTTCAAGAGTTAGGAGAAGAAAAGGACAACA 4735
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4736 GGGTTAAAGAAGCTGAAGAAAAAATCTTAACACTTGAAAACCAAGTTTATTCCATGAAAGCTGAACTTGAAACT 4809
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4810 AAGAAGAAAGAATTAGAACATGTGAATTTAAGTGTGAAAAGCAAAGAGGAGGAGTTAAAGGCATTGGAAGATAG 4883
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4884 GCTTGAGTCAGAAAGTGCTGCAAAATTAGCAGAGTTGAAGAGAAAAGCTGAACAAAAAATTGCTGCCATTAAGA 4957
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4958 AGCAGTTGTTATCTCAAATGGAAGAGAAAGAAGAACAGTATAAAAAAGGTACAGAAAGCCATTTGAGTGAGCTA 5031
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5032 AATACAAAATTGCAGGAAAGAGAAAGGGAAGTTCACATCTTGGAAGAAAAACTTAAGTCAGTGGAAAGTTCACA 5105
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5106 GTCAGAAACATTAATTGTACCCAGATCAGCAAAAAATGTGGCAGCATATACTGAACAAGAAGAAGCAGATTCCC 5179
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5180 AAGGCTGTGTGCAGAAGACATATGAAGAAAAAATCAGTGTTTTACAAAGAAACTTAACTGAAAAAGAAAAGCTA 5253
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5254 TTGCAGAGGGTAGGGCAGGAAAAAGAAGAGACAGTTTCTTCTCATTTTGAAATGCGATGCCAATACCAGGAGCG 5327
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5328 CTTAATAAAGCTAGAACATGCTGAGGCAAAGCAACATGAAGATCAAAGTATGATAGGTCATCTTCAAGAGGAGC 5401
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5402 TTGAAGAAAAAAACAAGAAATATTCCTTGATAGTAGCCCAGCATGTGGAAAAAGAAGGAGGTAAAAATAACATA 5475
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5476 CAGGCAAAGCAAAACTTGGAAAATGTGTTTGACGACGTCCAGAAAACCCTCCAGGAGAAGGAACTAACCTGTCA 5549
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5550 GATTTTGGAGCAAAAGATAAAAGAGCTGGATTCCTGCTTAGTAAGACAGAAAGAAGTACATAGAGTTGAAATGG 5623
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5624 AAGAGTTGACCTCAAAATATGAAAAATTACAGGCTTTACAACAGATGGATGGAAGAAATAAACCCACAGAACTT 5697
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5698 TTGGAAGAAAACACTGAAGAAAAGTCCAAATCACATTTGGTCCAACCCAAATTGCTTAGTAACATGGAAGCCCA 5771
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5772 GCACAATGATCTGGAGTTTAAATTAGCCGGGGCAGAACGGGAGAAACAGAAACTGGGCAAGGAGATTGTTAGAT 5845
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5846 TGCAGAAAGACCTTCGAATGTTGAGAAAGGAGCATCAGCAAGAATTGGAAATACTAAAGAAAGAATATGATCAA 5919
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5920 GAAAGGGAAGAGAAAATCAAACAGGAGCAGGAAGATCTTGAACTGAAGCACAATTCCACATTAAAACAGCTGAT 5993
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5994 GAGGGAGTTTAATACACAGCTGGCACAAAAGGAACAAGAGCTGGAAATGACCATAAAAGAAACTATCAATAAGG 6067
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6068 CCCAGGAGGTGGAGGCTGAACTTTTAGAAAGCCATCAAGAAGAGACAAATCAGTTACTTAAAAAAATTGCTGAG 6141
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6142 AAAGATGATGATCTAAAACGAACAGCCAAAAGATATGAAGAAATCCTTGATGCTCGTGAAGAAGAAATGACTGC 6215
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6216 AAAAGTAAGGGACCTGCAGACTCAACTTGAGGAGCTGCAGAAGAAATACCAGCAAAAGCTAGAGCAGGAGGAGA 6289
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6290 ACCCTGGCAATGATAATGTAACAATTATGGAGCTACAGACACAGCTAGCACAGAAGACGACTTTAATCAGTGAT 6363
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6364 TCGAAATTGAAAGAGCAAGAGTTCAGAGAACAGATTCACAATTTAGAAGACCGTTTGAAGAAATATGAAAAGAA 6437
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6438 TGTATATGCAACAACTGTGGGGACACCTTACAAAGGTGGCAATTTGTACCATACGGATGTCTCACTCTTTGGAG 6511
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6512 AACCTACCGAATTTGAGTATTTGCGAAAAGTGCTTTTTGAGTATATGATGGGTCGTGAGACTAAGACCATGGCA 6585
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6586 AAAGTTATAACCACCGTACTGAAGTTCCCTGATGATCAGACTCAGAAAATTTTGGAAAGAGAAGATGCTCGGCT 6659
Query 499 ------------------------------- 498
Sbjct 6660 GATGTTTACTTCACCTCGCAGTGGTATCTTC 6690
