Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10854
- Subject:
- XM_005265075.1
- Aligned Length:
- 6645
- Identities:
- 491
- Gaps:
- 6150
Alignment
Query 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTCAAGAAACTGAAGCAAAAGATCAGCGAGGAGCAGCAGCAGCTCCAGCAGGCGCTGGCTCCTGCTCAGGC 74
Query 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTCCTCCAATTCTTCAACACCAACAAGAATGAGGAGCAGGACATCTTCATTTACAGAGCAACTTGATGAAGGTA 148
Query 149 CACCCAATAGAGAGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGGTGCCCTCCGTGGAGTCT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CACCCAATAGAGAGTCAGGTGACACACAGTCTTTTGCACAGAAGCTCCAGCTCCGGGTGCCCTCCGTGGAGTCT 222
Query 223 TTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTGGTACGAACATCTTCCAG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTGTTTCGAAGTCCGATAAAGGAATCTCTATTCCGGTCTTCTTCTAAAGAGTCTTTGGTACGAACATCTTCCAG 296
Query 297 AGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTCTGATATGGATAGCGAGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGAATCCCTGAATCGACTTGACCTGGACAGTTCTACTGCCAGTTTTGATCCACCCTCTGATATGGATAGCGAGG 370
Query 371 CTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGTTGCGAAGAATGGAACGA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGAAGACTTGGTAGGGAATTCAGACAGTCTCAACAAAGAACAGTTGATTCAGCGGTTGCGAAGAATGGAACGA 444
Query 445 AGCTTAAGTAGCTACAGGGGAAAATATTCTGAG------TCATGGCTCCGA-TC-------TTCATCT------ 498
||||||||||||||||||||||||||||||||| |.|.| ||.|| || .||| ||
Sbjct 445 AGCTTAAGTAGCTACAGGGGAAAATATTCTGAGGGTATATTAAG--TCAGAGTCAGGATAAATCA-CTTCGGAG 515
Query 499 -------------------------------------------------------------------------- 498
Sbjct 516 AATAGCAGAATTAAGAGAGGAGCTCCAAATGGACCAGCAGGCAAAGAAACATCTGCAAGAGGAGTTTGATGCAT 589
Query 499 -------------------------------------------------------------------------- 498
Sbjct 590 CTTTAGAGGAGAAAGATCAGTATATCAGTGTTCTCCAAACTCAGGTTTCTCTACTGAAACAACGATTACGAAAT 663
Query 499 -------------------------------------------------------------------------- 498
Sbjct 664 GGCCCGATGAATGTTGATGTACTGAAACCACTTCCTCAGCTGGAACCACAGGCTGAAGTCTTCACTAAAGAAGA 737
Query 499 -------------------------------------------------------------------------- 498
Sbjct 738 GAATCCAGAAAGTGATGGAGAGCCAGTAGTGGAAGATGGAACTTCTGTAAAAACACTGGAAACACTCCAGCAAA 811
Query 499 -------------------------------------------------------------------------- 498
Sbjct 812 GAGTGAAGCGTCAAGAGAACCTACTTAAGCGTTGTAAGGAAACAATTCAGTCACATAAGGAACAATGTACACTA 885
Query 499 -------------------------------------------------------------------------- 498
Sbjct 886 TTAACTAGTGAAAAAGAAGCTCTGCAAGAACAACTGGATGAAAGACTTCAAGAACTAGAAAAGATAAAGGACCT 959
Query 499 -------------------------------------------------------------------------- 498
Sbjct 960 TCATATGGCCGAGAAGACTAAACTTATCACTCAGTTGCGTGATGCAAAGAACTTAATTGAACAGCTTGAACAAG 1033
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1034 ATAAGGGAATGGTAATCGCAGAGACAAAACGTCAGATGCATGAAACCCTGGAAATGAAAGAAGAAGAAATTGCT 1107
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1108 CAACTCCGTAGTCGCATCAAACAGATGACTACCCAGGGAGAGGAATTACGGGAACAGAAAGAAAAGTCCGAAAG 1181
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1182 AGCTGCTTTTGAGGAACTTGAAAAAGCTTTGAGTACAGCCCAAAAAACAGAGGAAGCACGGAGAAAACTGAAGG 1255
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1256 CAGAAATGGATGAACAAATAAAAACTATCGAAAAAACAAGTGAGGAGGAACGCATCAGTCTTCAACAGGAATTA 1329
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1330 AGTCGGGTGAAACAGGAGGTTGTTGATGTAATGAAAAAATCCTCAGAAGAACAAATTGCTAAGCTACAGAAGCT 1403
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1404 TCATGAAAAGGAGCTGGCCAGAAAAGAGCAGGAACTGACCAAGAAGCTTCAGACCCGAGAAAGGGAATTTCAGG 1477
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1478 AACAAATGAAAGTAGCTCTTGAAAAGAGTCAATCAGAATATTTGAAGATCAGCCAAGAAAAAGAACAGCAAGAA 1551
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1552 TCTTTGGCCCTAGAAGAGTTAGAGTTGCAGAAAAAAGCAATCCTCACAGAAAGTGAAAATAAACTTCGGGACCT 1625
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1626 TCAGCAAGAAGCAGAGACTTACAGAACTAGAATTCTTGAATTGGAAAGTTCTTTGGAAAAAAGCTTACAAGAAA 1699
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1700 ACAAAAATCAGTCAAAAGATTTGGCTGTTCATCTGGAAGCTGAAAAAAATAAGCACAATAAGGAGATTACAGTC 1773
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1774 ATGGTTGAAAAACACAAGACAGAATTGGAAAGCCTTAAGCATCAGCAGGATGCCCTTTGGACTGAAAAACTCCA 1847
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1848 AGTCTTAAAGCAACAATATCAGACTGAAATGGAAAAACTTAGGGAAAAGTGTGAACAAGAAAAAGAAACATTGT 1921
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1922 TGAAAGACAAAGAGATTATCTTCCAGGCCCACATAGAAGAAATGAATGAAAAGACTTTAGAAAAGCTTGATGTG 1995
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1996 AAGCAAACAGAACTAGAATCATTATCTTCTGAACTGTCAGAAGTATTAAAAGCCCGTCACAAACTAGAAGAGGA 2069
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2070 ACTTTCTGTTCTGAAAGATCAAACAGATAAAATGAAGCAGGAATTAGAGGCCAAGATGGATGAACAGAAAAATC 2143
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2144 ATCACCAGCAGCAAGTTGACAGTATCATTAAAGAACACGAGGTATCTATCCAGAGGACTGAGAAGGCATTAAAA 2217
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2218 GATCAAATTAATCAACTTGAGCTTCTCTTGAAGGAAAGGGACAAGCATTTGAAAGAGCATCAGGCTCATGTAGA 2291
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2292 AAATTTAGAGGCAGATATTAAAAGGTCTGAAGGGGAACTCCAGCAGGCATCTGCTAAGCTGGACGTTTTTCAGT 2365
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2366 CTTACCAGAGTGCCACACATGAGCAGACAAAAGCATATGAGGAACAGTTGGCCCAATTGCAGCAGAAGTTGTTG 2439
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2440 GATTTGGAAACAGAAAGAATTCTTCTTACCAAACAGGTTGCTGAAGTTGAAGCACAAAAGAAAGATGTTTGTAC 2513
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2514 TGAGTTAGATGCTCACAAAATCCAGGTGCAGGACTTAATGCAGCAACTTGAAAAACAAAATAGTGAAATGGAGC 2587
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2588 AAAAAGTAAAATCTTTAACCCAAGTCTATGAGTCCAAACTTGAAGATGGTAACAAAGAACAGGAACAGACAAAG 2661
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2662 CAAATCTTGGTGGAAAAGGAAAATATGATTTTACAAATGAGAGAAGGACAGAAGAAAGAAATTGAGATACTCAC 2735
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2736 ACAGAAATTGTCAGCCAAGGAGGACAGTATTCATATTTTGAATGAGGAATATGAAACCAAATTTAAAAACCAAG 2809
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2810 AAAAAAAGATGGAAAAAGTTAAGCAGAAAGCAAAGGAGATGCAAGAAACGTTAAAGAAAAAATTACTGGATCAG 2883
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2884 GAAGCCAAACTTAAGAAAGAGCTTGAAAATACTGCTCTAGAGCTTAGTCAGAAAGAAAAACAGTTTAATGCCAA 2957
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2958 AATGCTGGAAATGGCACAGGCTAACTCAGCTGGAATCAGTGATGCAGTGTCAAGACTGGAAACAAACCAAAAAG 3031
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3032 AACAAATAGAAAGTCTTACTGAGGTTCATCGACGAGAACTCAATGATGTCATATCAATCTGGGAAAAGAAACTT 3105
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3106 AATCAGCAAGCTGAAGAACTTCAGGAAATACATGAAATCCAATTACAGGAAAAAGAACAAGAGGTAGCAGAACT 3179
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3180 GAAACAAAAGATCCTCCTATTTGGGTGTGAAAAAGAAGAGATGAACAAGGAAATAACATGGCTGAAGGAAGAAG 3253
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3254 GTGTTAAGCAGGATACAACATTAAATGAATTACAGGAACAGTTAAAGCAGAAGTCTGCCCATGTGAATTCTCTT 3327
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3328 GCACAAGATGAAACTAAACTGAAAGCTCATCTTGAAAAGCTAGAGGTTGACTTGAATAAGTCTCTGAAGGAAAA 3401
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3402 TACTTTTCTTCAAGAGCAGCTAGTTGAACTGAAGATGCTGGCAGAAGAAGATAAGCGGAAGGTTTCTGAGTTGA 3475
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3476 CTAGCAAGTTGAAAACCACAGATGAAGAATTCCAGAGTTTGAAATCTTCACATGAAAAAAGTAACAAAAGCCTA 3549
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3550 GAGGACAAGAGCTTGGAATTTAAAAAACTGTCTGAGGAACTAGCGATTCAGCTAGATATTTGCTGTAAGAAAAC 3623
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3624 CGAAGCCTTATTAGAAGCTAAAACAAATGAGCTAATCAACATTAGTAGTAGTAAAACTAATGCCATTCTTTCTA 3697
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3698 GGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCACAGTTTCTGAA 3771
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3772 TTAGAAGCACAACTTAGACAGTTGACAGAGGAGCAAAATACACTAAATATTTCTTTTCAACAGGCTACTCATCA 3845
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3846 GTTAGAAGAAAAAGAAAATCAAATTAAGAGCATGAAGGCTGATATTGAAAGTCTTGTAACAGAAAAAGAAGCCT 3919
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3920 TACAGAAGGAAGGAGGCAATCAGCAACAGGCTGCTTCTGAAAAGGAGTCTTGTATAACACAGTTGAAGAAAGAG 3993
Query 499 -------------------------------------------------------------------------- 498
Sbjct 3994 TTATCTGAAAACATCAATGCTGTCACATTGATGAAAGAAGAGCTTAAAGAAAAAAAAGTTGAGATTAGCAGTCT 4067
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4068 TAGTAAACAACTAACTGATTTGAATGTTCAGCTTCAAAATAGCATCAGCCTATCCGAAAAAGAAGCAGCCATTT 4141
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4142 CATCACTAAGAAAGCAGTATGATGAAGAAAAATGTGAATTGCTGGATCAGGTGCAAGATTTATCTTTTAAAGTT 4215
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4216 GACACTCTGAGTAAAGAGAAAATTTCTGCTCTTGAGCAGGTAGATGACTGGTCCAATAAATTCTCAGAATGGAA 4289
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4290 GAAGAAAGCACAGTCAAGATTTACACAGCATCAAAACACTGTTAAAGAATTGCAGATCCAGCTTGAGTTAAAAT 4363
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4364 CAAAGGAAGCTTATGAAAAGGATGAGCAGATAAATTTATTGAAGGAAGAGCTTGATCAGCAAAATAAAAGATTT 4437
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4438 GATTGTTTAAAGGGTGAAATGGAAGACGACAAGAGCAAGATGGAGAAAAAGGAGTCTAATTTAGAAACAGAGTT 4511
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4512 AAAGTCTCAAACAGCAAGAATTATGGAATTAGAGGACCATATTACCCAGAAAACTATTGAAATAGAGTCCTTAA 4585
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4586 ATGAAGTTCTTAAAAATTACAATCAACAAAAGGATATTGAACACAAAGAATTGGTTCAGAAACTTCAACATTTT 4659
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4660 CAAGAGTTAGGAGAAGAAAAGGACAACAGGGTTAAAGAAGCTGAAGAAAAAATCTTAACACTTGAAAACCAAGT 4733
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4734 TTATTCCATGAAAGCTGAACTTGAAACTAAGAAGAAAGAATTAGAACATGTGAATTTAAGTGTGAAAAGCAAAG 4807
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4808 AGGAGGAGTTAAAGGCATTGGAAGATAGGCTTGAGTCAGAAAGTGCTGCAAAATTAGCAGAGTTGAAGAGAAAA 4881
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4882 GCTGAACAAAAAATTGCTGCCATTAAGAAGCAGTTGTTATCTCAAATGGAAGAGAAAGAAGAACAGTATAAAAA 4955
Query 499 -------------------------------------------------------------------------- 498
Sbjct 4956 AGGTACAGAAAGCCATTTGAGTGAGCTAAATACAAAATTGCAGGAAAGAGAAAGGGAAGTTCACATCTTGGAAG 5029
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5030 AAAAACTTAAGTCAGTGGAAAGTTCACAGTCAGAAACATTAATTGTACCCAGATCAGCAAAAAATGTGGCAGCA 5103
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5104 TATACTGAACAAGAAGAAGCAGATTCCCAAGGCTGTGTGCAGAAGACATATGAAGAAAAAATCAGTGTTTTACA 5177
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5178 AAGAAACTTAACTGAAAAAGAAAAGCTATTGCAGAGGGTAGGGCAGGAAAAAGAAGAGACAGTTTCTTCTCATT 5251
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5252 TTGAAATGCGATGCCAATACCAGGAGCGCTTAATAAAGCTAGAACATGCTGAGGCAAAGCAACATGAAGATCAA 5325
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5326 AGTATGATAGGTCATCTTCAAGAGGAGCTTGAAGAAAAAAACAAGAAATATTCCTTGATAGTAGCCCAGCATGT 5399
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5400 GGAAAAAGAAGGAGGTAAAAATAACATACAGGCAAAGCAAAACTTGGAAAATGTGTTTGACGACGTCCAGAAAA 5473
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5474 CCCTCCAGGAGAAGGAACTAACCTGTCAGATTTTGGAGCAAAAGATAAAAGAGCTGGATTCCTGCTTAGTAAGA 5547
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5548 CAGAAAGAAGTACATAGAGTTGAAATGGAAGAGTTGACCTCAAAATATGAAAAATTACAGGCTTTACAACAGAT 5621
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5622 GGATGGAAGAAATAAACCCACAGAACTTTTGGAAGAAAACACTGAAGAAAAGTCCAAATCACATTTGGTCCAAC 5695
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5696 CCAAATTGCTTAGTAACATGGAAGCCCAGCACAATGATCTGGAGTTTAAATTAGCCGGGGCAGAACGGGAGAAA 5769
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5770 CAGAAACTGGGCAAGGAGATTGTTAGATTGCAGAAAGACCTTCGAATGTTGAGAAAGGAGCATCAGCAAGAATT 5843
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5844 GGAAATACTAAAGAAAGAATATGATCAAGAAAGGGAAGAGAAAATCAAACAGGAGCAGGAAGATCTTGAACTGA 5917
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5918 AGCACAATTCCACATTAAAACAGCTGATGAGGGAGTTTAATACACAGCTGGCACAAAAGGAACAAGAGCTGGAA 5991
Query 499 -------------------------------------------------------------------------- 498
Sbjct 5992 ATGACCATAAAAGAAACTATCAATAAGGCCCAGGAGGTGGAGGCTGAACTTTTAGAAAGCCATCAAGAAGAGAC 6065
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6066 AAATCAGTTACTTAAAAAAATTGCTGAGAAAGATGATGATCTAAAACGAACAGCCAAAAGATATGAAGAAATCC 6139
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6140 TTGATGCTCGTGAAGAAGAAATGACTGCAAAAGTAAGGGACCTGCAGACTCAACTTGAGGAGCTGCAGAAGAAA 6213
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6214 TACCAGCAAAAGCTAGAGCAGGAGGAGAACCCTGGCAATGATAATGTAACAATTATGGAGCTACAGACACAGCT 6287
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6288 AGCACAGAAGACGACTTTAATCAGTGATTCGAAATTGAAAGAGCAAGAGTTCAGAGAACAGATTCACAATTTAG 6361
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6362 AAGACCGTTTGAAGAAATATGAAAAGAATGTATATGCAACAACTGTGGGGACACCTTACAAAGGTGGCAATTTG 6435
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6436 TACCATACGGATGTCTCACTCTTTGGAGAACCTACCGAATTTGAGTATTTGCGAAAAGTGCTTTTTGAGTATAT 6509
Query 499 -------------------------------------------------------------------------- 498
Sbjct 6510 GATGGGTCGTGAGACTAAGACCATGGCAAAAGTTATAACCACCGTACTGAAGTTCCCTGATGATCAGACTCAGA 6583
Query 499 ----------------------------------------------------------- 498
Sbjct 6584 AAATTTTGGAAAGAGAAGATGCTCGGCTGATGTTTACTTCACCTCGCAGTGGTATCTTC 6642
