Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10887
- Subject:
- XR_868868.2
- Aligned Length:
- 2942
- Identities:
- 706
- Gaps:
- 2195
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGTAACGGCGTGACGTAAGCGGAGACGCGTTAGTGGGGGGAAGGTTCTAGAAAAGCGGCGGTCTCGGCTCCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCAGTAGCAGCGGCGCCGGTCCCGTGTGCAGGAGCTCCTTTGCGGCCCAGTTTCTTGGCCATCGCCTGCTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCCACAGCGCCAGGACGAGTCCCGTGCGCGTCCGTCCGCGGAGGTCTTTCTCATCTCGCTCGGCTGCGGGAAA 222
Query 1 -------------------------ATGGAGAGAGAAAAGGAACAGTTCCGTAAGCTCTTTATTGGTGGCTTAA 49
||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 223 TCGGGCTGAAGCGACTGAGTCCGCGATGGAGAGAGAAAAGGAACAGTTCCGAAAGCTCTTTATTGGTGGCTTAA 296
Query 50 GCTTTGAAACCACAGAAGAAAGTTTGAGGAACTACTACGAACAATGGGGAAAGCTTACAGACTGTGTGGTAATG 123
||||||||||||||||||||||||||||.||||||||.||.||||||||||||||.||||||||||||||.|||
Sbjct 297 GCTTTGAAACCACAGAAGAAAGTTTGAGAAACTACTATGAGCAATGGGGAAAGCTCACAGACTGTGTGGTTATG 370
Query 124 AGGGATCCTGCAAGCAAAAGATCAAGAGGATTTGGTTTTGTAACTTTTTCATCCATGGCTGAGGTTGATGCTGC 197
.||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||||||||.|||||
Sbjct 371 CGGGATCCTGCAAGCAAAAGATCAAGAGGATTTGGCTTTGTAACTTTCTCATCCATGGCCGAGGTTGACGCTGC 444
Query 198 CATGGCTGCAAGACCTCATTCAATTGATGGGAGAGTAGTTGAGCCAAAACGTGCTGTAGCAAGAGAGGAATCTG 271
||||||||||||.||.|||||.||||||||.||.|||||||||||||||||||||||||||||||||||.||||
Sbjct 445 CATGGCTGCAAGGCCCCATTCCATTGATGGCAGGGTAGTTGAGCCAAAACGTGCTGTAGCAAGAGAGGAGTCTG 518
Query 272 GAAAACCAGGGGCTCATGTAACTGTGAAGAAGCTGTTTGTTGGCGGAATTAAAGAAGATACTGAGGAACATCAC 345
||||||||||.||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||.|||
Sbjct 519 GAAAACCAGGAGCCCATGTGACTGTGAAGAAGCTGTTTGTTGGTGGAATTAAGGAAGATACTGAGGAACACCAC 592
Query 346 CTTAGAGATTACTTTGAGGAATATGGAAAAATTGATACCATTGAGATAATTACTGATAGGCAGTCTGGAAAGAA 419
|||||||||||||||||.||.|||||||||||||||||.|||||.||||||||.||||||||||||||||||||
Sbjct 593 CTTAGAGATTACTTTGAAGAGTATGGAAAAATTGATACTATTGAAATAATTACCGATAGGCAGTCTGGAAAGAA 666
Query 420 AAGAGGCTTTGGCTTTGTTACTTTTGATGACCATGATCCTGTGGATAAAATCGTATTGCAGAAATACCATACCA 493
|||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||.|||||.||.||||
Sbjct 667 AAGAGGCTTTGGCTTTGTTACTTTTGATGACCATGATCCTGTGGATAAAATTGTCTTGCAAAAATATCACACCA 740
Query 494 TCAATGGTCATAATGCAGAAGTAAGAAAGGCTTTGTCTAGACAAGAAATGC----------------------- 544
|.||||||||.|||||||||||.||||||||.|||||||||||||||||||
Sbjct 741 TAAATGGTCACAATGCAGAAGTTAGAAAGGCATTGTCTAGACAAGAAATGCAGGAAGTCCAAAGTTCTAGGAGT 814
Query 545 -------------------------------------------------------------------------- 544
Sbjct 815 GGAAGAGGAGGAAACTTTGGTTTTGGGGATTCTCGTGGTGGCGGTGGCAATTTTGGACCAGGACCAGGAAGCAA 888
Query 545 ------------------------------------------------------------------AGGAGGAC 552
||||||||
Sbjct 889 CTTTAGGGGGGGATCTGATGGATACGGAAGTGGACGTGGATTTGGGGATGGCTATAATGGGTATGGAGGAGGAC 962
Query 553 CTGGAGGTGGCAATTTTGGAGGTAGCCCCGGTTATGGAGGAGGAAGAGGAGGATATGGTGGTGGAGGACCTGGA 626
||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGGAGGTGGCAATTTTGGAGGTAGCCCTGGTTATGGAGGAGGAAGAGGAGGATATGGTGGTGGAGGACCTGGA 1036
Query 627 TATGGCAACCAGGGTGGGGGCTACGGAGGTGGTTATGACAACTATGGAGGAGGAAATTATGGAAGTGGAAATTA 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1037 TATGGCAACCAGGGTGGGGGCTACGGAGGTGGTTATGACAACTATGGAGGAGGAAATTATGGAAGTGGAAGTTA 1110
Query 701 CAATGATTTTGGAAATTATAACCAGCAACCTTCTAACTACGGTCCAA--------------------------- 747
|||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct 1111 CAATGATTTTGGAAATTATAACCAGCAGCCTTCTAACTATGGTCCAATGAAGAGTGGAAACTTTGGGGGTAGCA 1184
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1185 GGAACATGGGAGGACCATATGGTGGAGGGAACTATGGTCCTGGAGGAAGTGGAGGAAGTGGTGGCTATGGTGGA 1258
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1259 AGGAGCAGATATTAAGCTTCTTCCTACTTACCATGGGCTTCACTGTATAAATAGGAGAGGATGAGAGCCCAGAG 1332
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1333 GTAACAGAACAGCTTCAGGTTATGGAAATAACAATGTTAAGGAAACTCTTATCTCAGTCATGCATAAATATGCA 1406
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1407 GTGGTATGGCAGAAGACACCAGAGCAGATGCAGACAGCCATTTTGTGAATGGATTGGATTATTTAATAACATTA 1480
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1481 CCTTACTGTGGAGGAAGGATTGTAAAAAAAAATGCCTTTGAGACAGTTTCTTAGCTTTTTAATTGTTGTTTCTT 1554
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1555 TCTAGTGGTCTTTGTAAGAGTGTAGAAGCATTCCTTCTTTGATAATGTTAAATTTGTAAGTTTCAGGTGACATG 1628
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1629 TGAAACCTTTTTTAAGATTTTTCTCAAAAGTTTTGAAAAGCTATTAGCCAGGATCATGGTGTAATAAGACATAA 1702
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1703 CGTTTTTCCTTTAAAAATTTTAAGTGCGTGTGTAGAGTTAAGAAGCTGTTGTACATTTATGATTTAATAAAATA 1776
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1777 ATTCTAAAGGAAATTGTGTAATTATAGACTTTTTATTTTAAATAAGTTAAGGAGTGGGTAGTATAATTAAGGTC 1850
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1851 CATTGCAAAGCTGTTGTTGTATTTGTGTAAGATAAAAATGCTGGTCAGATTTAAGTGTGTTGTCTGAAATTCAT 1924
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1925 CAGGAATAAATTACCTAGTTAACTTAAGGGATATCTCTGCAAAGAGAAACACCTTTTTAGATCTTTTAGATGCT 1998
Query 748 -------------------------------------------------------------------------- 747
Sbjct 1999 GCTTCTTCAATGCAAGGAAAGGAAATAACCCCAGCGAGGTACTCTTCAGGGACACAGGTCTAGTACAAGAGAAC 2072
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2073 TCTTGACGACTAATCGCAGCCAGTCTTAAAAAACTGTGCTGTATCTACAAAGCTTTAACTACAGTAGTTGATAA 2146
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2147 GGATGCCAACGAAAGCTGAGGGTGTAGAGCAAAGTAGTTCTAAGCTTCAGTTAAACTTCTTTAGGTAAGAACTT 2220
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2221 ATTTACTTTTTCTTTCTTAATTTTCCTCCCTTAAAAGATAAACTAATAAACTCTTCAATGGTCTTTTCAGTATA 2294
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2295 GTTCTTATGTAGTTTAACATAGCTTATAAATTGAGTTTAACAATAAACTCAAGATAATTTTATAAACCCTGTTT 2368
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2369 TCCAATCTGTCATTTACTTAAATTATTTTGGTTGTTTTCCCTTTTTTTCCTTCTTTCTCACCCCCTCCCTTTCC 2442
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2443 ATGAAGATTCAGGTGCTTAACATATCATTTTTTTCCCTGCTGGAATTTTAGCATTGATATGAACCATGGACAAG 2516
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2517 TATATTCTGCTGCCACAAAGACTGTAAAGTGCTTCATTTCAACAGCTGAGGCAAGCCAAGTGATCATTAATAAA 2590
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2591 GCTTTTCTTGCTTCCTTCAGTGGTGTTGGTAGTAAAATGGAAGGTGTCTTGCTGCAGGTAACTAATGAAGAAGT 2664
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2665 GGTCAACCACAGAGTCTTCAAGAAATAAGAAATTCTGTACCATCTGAAAGTAGTTCTTGTTGGTGCCTTCATTT 2738
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2739 AAGAAGCACTTTTAAGAAAAGGGAATGTTTTCTGATTTAAAACTTCATTTAGTACAGGTTCTTAATAAAATTAC 2812
Query 748 -------------------------------------------------------------------------- 747
Sbjct 2813 AAAAATGCTGATTGTAAAGGGTAACATCAAATTAGCAAAGGATAATGTATTGTTTTAGGATTTGTGAGTAGACA 2886
Query 748 -------------------------------------------------------- 747
Sbjct 2887 GATAAGAGCTCTATTTTAAATACAAGTTTTATAAAATAAATACTTTTGTATCCAAA 2942
