Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10943
- Subject:
- NM_002293.4
- Aligned Length:
- 4827
- Identities:
- 114
- Gaps:
- 4713
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGAGGGAGCCATCGGGCCGCGCCGGCCCTGCGGCCCCGGGGGCGGCTCTGGCCCGTGCTGGCCGTGCTGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCGGCCGCCGCGGCGGGCTGTGCCCAGGCAGCCATGGACGAGTGCACGGACGAGGGCGGGCGGCCGCAGCGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCATGCCCGAGTTCGTCAACGCCGCCTTCAACGTGACTGTGGTGGCCACCAACACGTGTGGGACTCCGCCCGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAATACTGTGTGCAGACCGGGGTGACCGGGGTCACCAAGTCCTGTCACCTGTGCGACGCCGGGCAGCCCCACCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGCACGGGGCAGCCTTCCTGACCGACTACAACAACCAGGCCGACACCACCTGGTGGCAAAGCCAGACCATGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCCGGGGTGCAGTACCCCAGCTCCATCAACCTCACGCTGCACCTGGGAAAAGCTTTTGACATCACCTATGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGTCTCAAGTTCCACACCAGCCGCCCGGAGAGCTTTGCCATTTACAAGCGCACACGGGAAGACGGGCCCTGGAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCTTACCAGTACTACAGTGGTTCCTGTGAGAACACCTACTCCAAGGCAAACCGCGGCTTCATCAGGACAGGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGACGAGCAGCAGGCCTTGTGTACTGATGAATTCAGTGACATTTCTCCCCTCACTGGGGGCAACGTGGCCTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTACCCTGGAAGGAAGGCCCAGCGCCTATAACTTTGACAATAGCCCTGTGCTGCAGGAATGGGTAACTGCCAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGACATCAGAGTAACTCTTAATCGCCTGAACACTTTTGGAGATGAAGTGTTTAACGATCCCAAAGTTCTCAAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTATTATTATGCCATCTCTGATTTTGCTGTAGGTGGCAGATGTAAATGTAATGGACACGCAAGCGAGTGTATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGAACGAATTTGATAAGCTGGTGTGTAATTGCAAACATAACACATATGGAGTAGACTGTGAAAAGTGTCTTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTCTTCAATGACCGGCCGTGGAGGAGGGCAACTGCGGAAAGTGCCAGTGAATGCCTGCCCTGTGATTGCAATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTCGATCCCAGGAATGCTACTTCGACCCTGAACTCTATCGTTCCACTGGCCATGGGGGCCACTGTACCAACTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGGATAACACAGATGGCGCCCACTGTGAGAGGTGCCGAGAGAACTTCTTCCGCCTTGGCAACAATGAAGCCTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCTTCATGCCACTGTAGTCCTGTGGGCTCTCTAAGCACACAGTGTGATAGTTACGGCAGATGCAGCTGTAAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGGAGTGATGGGGGACAAATGTGACCGTTGCCAGCCTGGATTCCATTCTCTCACTGAAGCAGGATGCAGGCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCTCTTGTGATCCCTCTGGCAGCATAGATGAATGTAATATTGAAACAGGAAGATGTGTTTGCAAAGACAATGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGAAGGCTTCAATTGTGAAAGATGCAAACCTGGATTTTTTAATCTGGAATCATCTAATCCTCGGGGTTGCACAC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCTGCTTCTGCTTTGGGCATTCTTCTGTCTGTACAAACGCTGTTGGCTACAGTGTTTATTCTATCTCCTCTACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTCAGATTGATGAGGATGGGTGGCGTGCGGAACAGAGAGATGGCTCTGAAGCATCTCTCGAGTGGTCCTCTGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAGGCAAGATATCGCCGTGATCTCAGACAGCTACTTTCCTCGGTACTTCATTGCTCCTGCAAAGTTCTTGGGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCAGGTGTTGAGTTATGGTCAGAACCTCTCCTTCTCCTTTCGAGTGGACAGGCGAGATACTCGCCTCTCTGCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAAGACCTTGTGCTTGAGGGAGCTGGCTTAAGAGTATCTGTACCCTTGATCGCTCAGGGCAATTCCTATCCAAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGAGACCACTGTGAAGTATGTCTTCAGGCTCCATGAAGCAACAGATTACCCTTGGAGGCCTGCTCTTACCCCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTGAATTTCAGAAGCTCCTAAACAACTTGACCTCTATCAAGATACGTGGGACATACAGTGAGAGAAGTGCTGGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TATTTGGATGATGTCACCCTGGCAAGTGCTCGTCCTGGGCCTGGAGTCCCTGCAACTTGGGTGGAGTCCTGCAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTGTCCTGTGGGATATGGAGGGCAGTTTTGTGAGATGTGCCTCTCAGGTTACAGAAGAGAAACTCCTAATCTTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GACCATACAGTCCATGTGTGCTTTGCGCCTGCAATGGACACAGCGAGACCTGTGATCCTGAGACAGGTGTTTGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AACTGCAGAGACAATACGGCTGGCCCGCACTGTGAGAAGTGCAGTGATGGGTACTATGGAGATTCAACTGCAGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CACCTCCTCCGATTGCCAACCCTGTCCGTGTCCTGGAGGTTCAAGTTGTGCTGTTGTTCCCAAGACAAAGGAGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGGTGTGCACCAACTGTCCTACTGGCACCACTGGTAAGAGATGTGAGCTCTGTGATGATGGCTACTTTGGAGAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCCCTGGGTAGAAACGGCCCTGTGAGACTTTGCCGCCTGTGCCAGTGCAGTGACAACATCGATCCCAATGCAGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGGAAATTGCAATCGCTTGACGGGAGAATGCCTGAAGTGCATCTATAACACTGCTGGCTTCTATTGTGACCGGT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCAAAGACGGATTTTTTGGAAATCCCCTGGCTCCCAATCCAGCAGACAAATGCAAAGCCTGCAATTGCAATCTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TATGGGACCATGAAGCAGCAGAGCAGCTGTAACCCCGTGACGGGGCAGTGTGAATGTTTGCCTCACGTGACTGG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CCAGGACTGTGGTGCTTGTGACCCTGGATTCTACAATCTGCAGAGTGGGCAAGGCTGTGAGAGGTGTGACTGCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATGCCTTGGGCTCCACCAATGGGCAGTGTGACATCCGCACCGGCCAGTGTGAGTGCCAGCCCGGCATCACTGGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CAGCACTGTGAGCGCTGTGAGGTCAACCACTTTGGGTTTGGACCTGAAGGCTGCAAACCCTGTGACTGTCATCC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGAGGGATCTCTTTCACTTCAGTGCAAAGATGATGGTCGCTGTGAATGCAGAGAAGGCTTTGTGGGAAATCGCT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GTGACCAGTGTGAAGAAAACTATTTCTACAATCGGTCTTGGCCTGGCTGCCAGGAATGTCCAGCTTGTTACCGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTGGTAAAGGATAAGGTTGCTGATCATAGAGTGAAGCTCCAGGAATTAGAGAGTCTCATAGCAAACCTTGGAAC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGGGGATGAGATGGTGACAGATCAAGCCTTCGAGGATAGACTAAAGGAAGCAGAGAGGGAAGTTATGGACCTCC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTCGTGAGGCCCAGGATGTCAAAGATGTTGACCAGAATTTGATGGATCGCCTACAGAGAGTGAATAACACTCTG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TCCAGCCAAATTAGCCGTTTACAGAATATCCGGAATACCATTGAAGAGACTGGAAACTTGGCTGAACAAGCGCG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TGCCCATGTAGAGAACACAGAGCGGTTGATTGAAATCGCATCCAGAGAACTTGAGAAAGCAAAAGTCGCTGCTG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCAATGTGTCAGTCACTCAGCCAGAATCTACAGGGGACCCAAACAACATGACTCTTTTGGCAGAAGAGGCTCGA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AAGCTTGCTGAACGTCATAAACAGGAAGCTGATGACATTGTTCGAGTGGCAAAGACAGCCAATGATACGTCAAC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGAGGCATACAACCTGCTTCTGAGGACACTGGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGCTTAATA 3700
Query 1 ------ATGAACAAGCGAAGAACATCTCACAGGATCTGGAAAAACAAGCTGCCCGAGTACATGAGGAGGCCAAA 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 GGAAGTATGAACAAGCGAAGAACATCTCACAGGATCTGGAAAAACAAGCTGCCCGAGTACATGAGGAGGCCAAA 3774
Query 69 AGGGCCGGTGACAAAGCTGTGGAGATCTATGCCAGCGTGGCTCAGC---------------------------- 114
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 AGGGCCGGTGACAAAGCTGTGGAGATCTATGCCAGCGTGGCTCAGCTGAGCCCTTTGGACTCTGAGACACTGGA 3848
Query 115 -------------------------------------------------------------------------- 114
Sbjct 3849 GAATGAAGCAAATAACATAAAGATGGAAGCTGAGAATCTGGAACAACTGATTGACCAGAAATTAAAAGATTATG 3922
Query 115 -------------------------------------------------------------------------- 114
Sbjct 3923 AGGACCTCAGAGAAGATATGAGAGGGAAGGAACTTGAAGTCAAGAACCTTCTGGAGAAAGGCAAGACTGAACAG 3996
Query 115 -------------------------------------------------------------------------- 114
Sbjct 3997 CAGACCGCAGACCAACTCCTAGCCCGAGCTGATGCTGCCAAGGCCCTCGCTGAAGAAGCTGCAAAGAAGGGACG 4070
Query 115 -------------------------------------------------------------------------- 114
Sbjct 4071 GGATACCTTACAAGAAGCTAATGACATTCTCAACAACCTGAAAGATTTTGATAGGCGTGTGAACGATAACAAGA 4144
Query 115 -------------------------------------------------------------------------- 114
Sbjct 4145 CGGCCGCAGAGGAGGCACTAAGGAAGATTCCTGCCATCAACCAGACCATCACTGAAGCCAATGAAAAGACCAGA 4218
Query 115 -------------------------------------------------------------------------- 114
Sbjct 4219 GAAGCCCAGCAGGCCCTGGGCAGTGCTGCGGCGGATGCCACAGAGGCCAAGAACAAGGCCCATGAGGCGGAGAG 4292
Query 115 -------------------------------------------------------------------------- 114
Sbjct 4293 GATCGCGAGCGCTGTCCAAAAGAATGCCACCAGCACCAAGGCAGAAGCTGAAAGAACTTTTGCAGAAGTTACAG 4366
Query 115 -------------------------------------------------------------------------- 114
Sbjct 4367 ATCTGGATAATGAGGTGAACAATATGTTGAAGCAACTGCAGGAAGCAGAAAAAGAGCTAAAGAGAAAACAAGAT 4440
Query 115 -------------------------------------------------------------------------- 114
Sbjct 4441 GACGCTGACCAGGACATGATGATGGCAGGGATGGCTTCACAGGCTGCTCAAGAAGCCGAGATCAATGCCAGAAA 4514
Query 115 -------------------------------------------------------------------------- 114
Sbjct 4515 AGCCAAAAACTCTGTTACTAGCCTCCTCAGCATTATTAATGACCTCTTGGAGCAGCTGGGGCAGCTGGATACAG 4588
Query 115 -------------------------------------------------------------------------- 114
Sbjct 4589 TGGACCTGAATAAGCTAAACGAGATTGAAGGCACCCTAAACAAAGCCAAAGATGAAATGAAGGTCAGCGATCTT 4662
Query 115 -------------------------------------------------------------------------- 114
Sbjct 4663 GATAGGAAAGTGTCTGACCTGGAGAATGAAGCCAAGAAGCAGGAGGCTGCCATCATGGACTATAACCGAGATAT 4736
Query 115 -------------------------------------------------------------------------- 114
Sbjct 4737 CGAGGAGATCATGAAGGACATTCGCAATCTGGAGGACATCAGGAAGACCTTACCATCTGGCTGCTTCAACACCC 4810
Query 115 ----------------- 114
Sbjct 4811 CGTCCATTGAAAAGCCC 4827
