Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10960
- Subject:
- NM_001276275.2
- Aligned Length:
- 1434
- Identities:
- 695
- Gaps:
- 714
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATCCCAGCAACTGGAGCAGCTTCATCTTCCAGGGTCACGCCCAGAACCCCCTGCAGGTCGGGGCTGAGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAGTCCCGCTTCTTTGCCTCCCAGGGCTGCGCCCAGAGTCCATTCCAGGCCGCGCCGGCGCCCCCGCCCACGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAGGCCCCGGCGGCCGAGCCCCTCCAGGTGGACTTGCTCCCGGTGCTCGCCGCCGCCCAGGAGTCCGCCGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGCTGCGGCCGCTGCCGCCGCTGCTGCCGCCGTCGCTGCCGCGCCCCCGGCCCCTGCCGCCGCCTCTACGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGACACAGCGGCCCTGAAGCAGCCTCCGGCGCCCCCTCCGCCACCCCCGCCAGTGTCGGCGCCCGCGGCCGAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGCGCCCCCCGCCTCCGCCGCCACTATCGCCGCGGCGGCGGCCACCGCCGTCGTAGCCCCAACCTCGACGGTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGTGGCCCCGGTCGCGTCTGCCTTGGAGAAGAAGACAAAGAGCAAGGGGCCCTACATCTGCGCTCTGTGCGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGGAGTTCAAGAACGGCTACAATCTCCGGAGGCACGAAGCCATCCACACGGGAGCCAAGGCCGGCCGGGTCC 592
Query 1 --------------------------ATGGTGCCCCTGAGCCTCCTGAGCGTGCCCCAGCTGAGCGGAGCCGGC 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTCGGGTGCTATGAAGATGCCGACCATGGTGCCCCTGAGCCTCCTGAGCGTGCCCCAGCTGAGCGGAGCCGGC 666
Query 49 GGGGGAGGGGGAGAGGCGGGTGCCGGCGGCGGCGCTGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGACCGC 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGGGGAGGGGGAGAGGCGGGTGCCGGCGGCGGCGCTGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGACCGC 740
Query 123 CTCGGGGAAGCGCATCCGGAAGAACCATGCCTGCGAGATGTGTGGCAAGGCCTTCCGCGACGTCTACCACCTGA 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTCGGGGAAGCGCATCCGGAAGAACCATGCCTGCGAGATGTGTGGCAAGGCCTTCCGCGACGTCTACCACCTGA 814
Query 197 ACCGACACAAGCTGTCGCACTCGGACGAGAAGCCCTACCAGTGCCCGGTGTGCCAGCAGCGCTTCAAGCGCAAG 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACCGACACAAGCTGTCGCACTCGGACGAGAAGCCCTACCAGTGCCCGGTGTGCCAGCAGCGCTTCAAGCGCAAG 888
Query 271 GACCGCATGAGCTACCACGTGCGCTCACATGACGGCGCTGTGCACAAGCCCTACAACTGCTCCCACTGTGGCAA 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GACCGCATGAGCTACCACGTGCGCTCACATGACGGCGCTGTGCACAAGCCCTACAACTGCTCCCACTGTGGCAA 962
Query 345 GAGCTTCTCCCGGCCGGATCACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAACGGCCCTTCAAATGTG 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAGCTTCTCCCGGCCGGATCACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAACGGCCCTTCAAATGTG 1036
Query 419 AGAAATGTGAGGCAGCTTTCGCCACGAAGGATCGGCTGCGGGCGCACACAGTACGACACGAGGAGAAAGTGCCA 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGAAATGTGAGGCAGCTTTCGCCACGAAGGATCGGCTGCGGGCGCACACAGTACGACACGAGGAGAAAGTGCCA 1110
Query 493 TGTCACGTGTGTGGCAAGATGCTGAGCTCGGCTTATATTTCGGACCACATGAAGGTGCACAGCCAGGGTCCTCA 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGTCACGTGTGTGGCAAGATGCTGAGCTCGGCTTATATTTCGGACCACATGAAGGTGCACAGCCAGGGTCCTCA 1184
Query 567 CCATGTCTGTGAGCTCTGCAACAAAGGCTTCACCACGGCAGCATACCTGCGCATCCACGCGGTGAAG---GACC 637
||||||||||||||||||||||||||| ||| .|||||.| |.||
Sbjct 1185 CCATGTCTGTGAGCTCTGCAACAAAGG----------------TAC-------------TGGTGAGGTTTGTCC 1229
Query 638 ACGGGCTCCAGGC-CCCGCGG--GCTGACCGCATCCTGTGCAAGCTGTGCAGCGTGCACTGCA-----AGACCC 703
|..||| ||| .|.|||| || |.|.|||.| .||| |||||| ||| ||| || |||
Sbjct 1230 AATGGC----GGCGGCAGCGGCAGC-GGCGGCAGC---GGCA------GCAGCG-GCA--GCAGTAGCAG-CCC 1285
Query 704 CTGCC-CAGCTGGCCGGCCACATGCAGACCCATCTGGGG----GGGGCCGCCCCCCCTGTCCCGGGAGACGCCC 772
||.|| |||||| .||.|.| ||..||.|||| ||||..| ||||| ||| |.
Sbjct 1286 CTCCCACAGCTG--TGGGCTC-------CCTCTCGGGGGCGGAGGGGGTG-----CCTGT-----GAG----CT 1336
Query 773 CCCAGCCACAGCCCACCTGC-------- 792
|.|||||||..|||.|| |
Sbjct 1337 CTCAGCCACTTCCCTCC--CAACCCTGG 1362