Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10960
- Subject:
- XR_001785483.1
- Aligned Length:
- 2615
- Identities:
- 687
- Gaps:
- 1854
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGCGGCCCTCGGGCCATGCGTTCGGCTCGGCCCAACCCGGCCGGCCGGGGGCGGCGCCCCGAGCCCGGGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCGCGGCCCGTGCCCCCGGCTCCCGCTGAGCTCCGGGGGCCCCCACTGTGGCCGAGGCCATGTTCCCCGTGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTTGCACGCTGCTGGCCCCCCCCTTCCCCGTGCTGGGCCTGGACTCCCGGGGGGTGGGCGGCCTCATGAACT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTTCCCGCCACCTCAGGGTCACGCCCAGAACCCCCTGCAGGTCGGGGCTGAGCTCCAGTCCCGCTTCTTTGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCCAGGGCTGCGCCCAGAGTCCATTCCAGGCCGCGCCGGCGCCCCCACCCACGCCCCAGGCCCCGGCGGCCGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCCCTCCAAGTGGACTTGCTCCCGGTTCTCGCCGCCGCGCAGGAATCAGCCGCGGCGGCGGCGGCTGCTGCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGCTGCCGCTGCAGTGGTTACTGCACCCCCGGCCCCTGCCGCCGCCTCCACAGTGGACACAGCGGCCCTGAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGCCTCCGGCGCCTCCTCCGCCACCCCCTGCCGTCTCCGCACCAGCCGCCGAGGCCGCGCCCCCCGCCGCGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGCCACTATCGCAGCAGCGGCTGCCACCGCTGTCGTCGCCCCAACCTCGACGGTCGCCGTGGCCCCAGTTGCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGTCTTGGAGAAGAAGACAAAGAGCAAGGGGCCCTACATTTGCGCCCTGTGCGCCAAGGAGTTCAAGAACGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TACAACCTCCGAAGGCACGAAGCCATCCACACGGGAGCCAAGGCTGGCCGGGTCCCTTCGGGTGCTATGAAGAT 814
Query 1 -------ATGGTGCCCCTGAGCCTCCTGAGCGTGCCCCAGCTGAGCGGAGCCGGCGGGGGAGGGGGAGAGGCGG 67
||||||||||||||||||.||||.||.||||||||||||||.|||.|||||||.||||||||.||.|
Sbjct 815 GCCCACCATGGTGCCCCTGAGCCTCTTGAGTGTCCCCCAGCTGAGCGGGGCCAGCGGGGGTGGGGGAGAAGCCG 888
Query 68 GTGCCGGCGGCGGCGCTGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGACCGCCTCGGGGAAGCGCATCCGG 141
|.||.|||||||||.|.|||||.|||||.|||||||||||.|||||||||||.|||||.|||||||||||||||
Sbjct 889 GGGCTGGCGGCGGCACAGCCGCGGTGGCGGCCGGTGGCGTTGTGACCACGACTGCCTCTGGGAAGCGCATCCGG 962
Query 142 AAGAACCATGCCTGCGAGATGTGTGGCAAGGCCTTCCGCGACGTCTACCACCTGAACCGACACAAGCTGTCGCA 215
|||||.||.||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 963 AAGAATCACGCCTGCGAGATGTGCGGCAAGGCCTTCCGCGACGTCTACCACCTGAACCGACATAAGCTGTCGCA 1036
Query 216 CTCGGACGAGAAGCCCTACCAGTGCCCGGTGTGCCAGCAGCGCTTCAAGCGCAAGGACCGCATGAGCTACCACG 289
.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1037 TTCGGACGAGAAGCCCTACCAGTGCCCTGTGTGCCAGCAGCGCTTCAAGCGCAAGGACCGCATGAGTTACCACG 1110
Query 290 TGCGCTCACATGACGGCGCTGTGCACAAGCCCTACAACTGCTCCCACTGTGGCAAGAGCTTCTCCCGGCCGGAT 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGCGCTCACATGACGGCGCTGTGCACAAGCCCTACAACTGCTCCCACTGTGGCAAGAGCTTCTCCCGGCCGGAT 1184
Query 364 CACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAACGGCCCTTCAAATGTG------------------- 418
||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1185 CACCTCAACAGTCACGTCAGACAAGTGCACTCAACAGAGCGGCCCTTCAAATGTGAGGCCTGGTCATCTCACGC 1258
Query 419 -------------------------------------------------------------------------- 418
Sbjct 1259 CCATTTCCTACAGATCAAAGACCCCCGAGACTCTGATCCCCTTATCTTGCTCCCTTCTCTCTACTCCCCGAAGC 1332
Query 419 --------------------------------AGAAATGTGAGGCAGCTTTCGCCACGAAGGATCGGCTGCGGG 460
|||||||||||||||||||.||.|||||||||||.||.||.|
Sbjct 1333 TTTAACTCTCCTGTGACCCCACACCCTCCCCCAGAAATGTGAGGCAGCTTTTGCTACGAAGGATCGCCTCCGAG 1406
Query 461 CGCACACAGTACGACACGAGGAGAAAGTGCCATGTCACGTGTGTGGCAAGATGCTGAGCTCGGCTTATATTTCG 534
||||||||||.||||||||||||||.|||||||||||.||.||||||||||||||||||||||||||||||||.
Sbjct 1407 CGCACACAGTCCGACACGAGGAGAAGGTGCCATGTCATGTCTGTGGCAAGATGCTGAGCTCGGCTTATATTTCC 1480
Query 535 GACCACATGAAGGTGCACAGCCAGGGTCCTCACCATGTCTGTGAGCTCTGCAACAA-----------AGGCTTC 597
||||||||||||||||||||||||||.||||||||||||||||||||||||||||| |||.||.
Sbjct 1481 GACCACATGAAGGTGCACAGCCAGGGCCCTCACCATGTCTGTGAGCTCTGCAACAAAGGTACTGGTGAGGTTTG 1554
Query 598 ACCA----------CGGCAGCA-TACCTGC-------GCATC--CACGCGGTGAAGGA-------CCAC----- 639
.||| |||||||| .|.|.|| |||.| || |.|||| |.| ||||
Sbjct 1555 TCCAATGGCGGCAGCGGCAGCAGCAGCGGCGGCGGCGGCAGCAGCA-GTGGTG--GCAGCCCCCCCCACAGCTG 1625
Query 640 -GGGCTCCAGGCCCCGC--GGGCTGACCGCAT-CCTGTGCAAGCTGTGCAGCGTGCACTGCAAGACCCCTGCCC 709
|||||| ||.|.| ||||.||..|..| ||.||| ||||.| |||| |||| .|||| |||
Sbjct 1626 TGGGCTC----CCTCTCTGGGGCAGAGGGGGTACCAGTG--AGCTCT-CAGC---CACT------TCCCT-CCC 1682
Query 710 AGC--TGGCCGGCCACATGCAGACCCATCTGGGGG---GGG---------------------------CCGCCC 751
||| |||...||..||.|..|| |||||| ||| |.|.|.
Sbjct 1683 AGCCTTGGTGAGCTCCAAGTTGA------TGGGGGAGAGGGGAGAGTGGAGGAAAGCTCTTCTTGGTACAGTCT 1750
Query 752 CCCCTGTCCC-----------------------------GGGAGACGCCCCCCAGCCACAG------------- 783
||.|| |||| .|||| ||.||||.||.||
Sbjct 1751 CCTCT-TCCCACCAACTCCTCACGACTCTTCATCAACCAAGGAG----CCTCCAGACAGAGAGGAGGAAGAAGG 1819
Query 784 -----------------------CCCACCTGC------------------------------------------ 792
..|.|||||
Sbjct 1820 AATTCACTAGGTTTTAACAATGTTTCTCCTGCTCCTTTCTTCTCCCTATCAGAGCTGACCCTACAAACACCTGT 1893
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1894 CCCCTGAGTTGTGTTGAAGTCCCCTGGACAATGAGCAGGGGTGGCAGAGGACAGCAGCAGCCACTGCCCTCACC 1967
Query 793 -------------------------------------------------------------------------- 792
Sbjct 1968 TTTAACCCCTTGCCTTGCCTCCCAGGGATTTGTGAGCCTTTCCTAGAAGGTCCTGTGCTCTCCTCCTTCTGTCC 2041
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2042 CCTCCCCTACTGTCTGCTGCCCCTTCCTGGGGAGTTGGTGCTTTCTTTTTTGTTGTTGTTTTTTCCCAGGGGTA 2115
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2116 GGGAGGAGAGAGGAGGGGAAAGAAGATTCTGTCCCAGAGGAGAGAAAAGGTGGTATTGAGGAGGGGCAGAAGCG 2189
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2190 GGGAAGGCAGAGGGATACTTGAGTAAGGTTGGGTGGTTAAACCCCAAGCATCCTACTGGAGTGTCTGTCCAGGG 2263
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2264 AGAAGCCAAGGGGAGCATCAGAAGGAGCCACTGGAGCCAGAGGCAGAACAAGAGAGATGGAATCTTAGGGGGCC 2337
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2338 AGGGCAAAGGAGGGGAGCCAGGGACAAGAGGTGCTTCCTGGGGGTGGGGGAATGCAGCCACAGTGTCTCCCCCT 2411
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2412 TCCCTCTTCCACCCCAGCTCCAGCCCTGGTCTTTCTTCCTCTTTCCCATAACAGAAGCTATGGCCCTGGCCATG 2485
Query 793 -------------------------------------------------------------------------- 792
Sbjct 2486 TCATCGTGTTCCTGTGTCCCTTGCATGTTCCCCACCCTCCCCTCCCTCCTTTTGCGCAGACCCCATTACAATAA 2559
Query 793 ------------------------- 792
Sbjct 2560 ATTTTAAATAAAAACTTGTCTCTGA 2584
