Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10962
- Subject:
- NM_001365210.2
- Aligned Length:
- 1517
- Identities:
- 471
- Gaps:
- 1003
Alignment
Query 1 ---------------------------------ATGGATGAAAGGAACCGACAG---ACTTT----AAGA---- 30
||||||||||||||||||||| ||||| ||||
Sbjct 1 ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA 74
Query 31 -------------AAGAAAGGC------CTTAATG------GT---TGTGA----------------------- 53
|||||||.| ||||.|| || |||||
Sbjct 75 GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA 148
Query 54 -------------------------GAGCCCTGATGCTGACGA--TTACTT--------------------TG- 79
.|||.|||||...|||.| || ||| ||
Sbjct 149 GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTT-CTTCTCAAGTATACAGAATATAATGA 221
Query 80 ----------AGCACAGTCCACT---------------CTC----------GGAGGACAGA------------- 105
||||.|..|.||| ||| |||..|||||
Sbjct 222 ACCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAACACAGAGGGTGCGACAGCC 295
Query 106 -------------TTCA-----GCAAACT--AAAT---GAAGA---------------TAGTG----ATTTTAT 137
|||| ||.|||| |.|| ||||| ||.|| ||||.||
Sbjct 296 CAGACCCTGATACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGAATTTGAT 369
Query 138 TTTCAA-ACGAGG--------------CCCTCCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTCACAGTTC 196
|| |.||.| |.|.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 370 ----AATATGATGCGGAATCATAAAATCGCACCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTCACAGTTC 439
Query 197 CAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGCAGCCAGC 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 CAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGCAGCCAGC 513
Query 271 TCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTGGAGCTCC 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 TCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTGGAGCTCC 587
Query 345 TCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAATGGAGCTG 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 588 TCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAATGGAGCTG 661
Query 419 GAAGCAGTCCAGTGGG-GAATGGATTTGTAAACTCAAGA----GCTTCTCCAAATTTGA-----TTGGAGCTAC 482
|||||||||||||||| ..|||.|.|..||| |||| ||.|| .|||| ||..||| ||
Sbjct 662 GAAGCAGTCCAGTGGGCCCATGTACTGCTAA----AAGAAGAGGCATC------CTTGAGACTTTTAAAGC-AC 724
Query 483 TGGTGCAAATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTTGGAATGA 556
|| ||..|.||.|||.||.| |||||.|| ||||
Sbjct 725 TG----AACGAACTCAGGAAAGG---------CAAAGACT-----------------------TCTT------- 755
Query 557 ACAGTAGGAAACCAGA-----TCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACTAAACA 625
.|.||.|||||||.| ||
Sbjct 756 -AAATAAGAAACCAAAGAAAGTC--------------------------------------------------- 777
Query 626 CCCAAAGGATCAGTAGTTCTCAAGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACAACCCCAAGCTTG 699
Sbjct 778 -------------------------------------------------------------------------- 777
Query 700 CCTCCGCAAGGACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGACCAGCGCTGACCT 773
Sbjct 778 -------------------------------------------------------------------------- 777
Query 774 GTCAGCCCTTCAAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGCAGCAGCACCACC 847
Sbjct 778 -------------------------------------------------------------------------- 777
Query 848 TAGGACAAGCAGCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTATCCATTAATACC 921
Sbjct 778 -------------------------------------------------------------------------- 777
Query 922 AACCAAAACATCAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATCGGGCTTCCAGCA 995
Sbjct 778 -------------------------------------------------------------------------- 777
Query 996 GCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCCCGCAGCCCCAGC 1069
Sbjct 778 -------------------------------------------------------------------------- 777
Query 1070 CCCGACAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGATGGCAGTGATCGG 1143
Sbjct 778 -------------------------------------------------------------------------- 777
Query 1144 GAGGATCCACGGGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGACAGAGAAAGCCC 1217
Sbjct 778 -------------------------------------------------------------------------- 777
Query 1218 TTCTGTAAAGCGAATGAGGATGGACGCGTGGGTGACC 1254
Sbjct 778 ------------------------------------- 777