Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10962
• Subject: NM_001365211.2
• Aligned Length: 1506
• Identities: 496
• Gaps: 987

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA  148

Query    1  ---------------------------------------------------------------------ATG--  3
                                                                                 |||  
Sbjct  149  GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTTCTTCTCAAGTATACAGAATATAATGAA  222

Query    4  ---GATGAAAG--GAACCGAC-------------AGACTTTAAGAAAGAAAGGCCTTAATGGTTGTGAGAGCCC  59
               .|||||||  |||||.||             ||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGACTTTAAGAAAGAAAGGCCTTAATGGTTGTGAGAGCCC  296

Query   60  TGATGCTGACGATTACTTTGAGCACAGTCCACTCTCGGAGGACAGATTCAGCAAACTAAATGAAGATAGTGATT  133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGATGCTGACGATTACTTTGAGCACAGTCCACTCTCGGAGGACAGATTCAGCAAACTAAATGAAGATAGTGATT  370

Query  134  TTATTTTCAAACGAGGCCCTCCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTCACAGTTCCAGTGACCAGC  207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTATTTTCAAACGAGGCCCTCCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTCACAGTTCCAGTGACCAGC  444

Query  208  CCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGCAGCCAGCTCAACGTTAAC  281
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGCAGCCAGCTCAACGTTAAC  518

Query  282  AGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTGGAGCTCCTCAGAGACCAC  355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTGGAGCTCCTCAGAGACCAC  592

Query  356  CAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTCCA  429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTCCA  666

Query  430  GTGGG-GAATGGATTTGTAAACTCAAGA----GCTTCTCCAAATTTGA-----TTGGAGCTACTGGTGCAAATA  493
            ||||| ..|||.|.|..|||    ||||    ||.||      .||||     ||..||| ||||    ||..|
Sbjct  667  GTGGGCCCATGTACTGCTAA----AAGAAGAGGCATC------CTTGAGACTTTTAAAGC-ACTG----AACGA  725

Query  494  GCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTTGGAATGAACAGTAGGAAA  567
            .||.|||.||.|         |||||.||                       ||||        .|.||.||||
Sbjct  726  ACTCAGGAAAGG---------CAAAGACT-----------------------TCTT--------AAATAAGAAA  759

Query  568  CCAGA-----TCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACTAAACACCCAAAGGATC  636
            |||.|     ||                                                              
Sbjct  760  CCAAAGAAAGTC--------------------------------------------------------------  771

Query  637  AGTAGTTCTCAAGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACAACCCCAAGCTTGCCTCCGCAAGG  710
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query  711  ACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGACCAGCGCTGACCTGTCAGCCCTTC  784
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query  785  AAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGCAGCAGCACCACCTAGGACAAGCA  858
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query  859  GCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTATCCATTAATACCAACCAAAACAT  932
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query  933  CAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATCGGGCTTCCAGCAGCAGCAGCAGC  1006
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1007  AGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCCCGCAGCCCCAGCCCCGACAGGAA  1080
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1081  ATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGATGGCAGTGATCGGGAGGATCCACG  1154
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1155  GGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGACAGAGAAAGCCCTTCTGTAAAGC  1228
                                                                                      
Sbjct  772  --------------------------------------------------------------------------  771

Query 1229  GAATGAGGATGGACGCGTGGGTGACC  1254
                                      
Sbjct  772  --------------------------  771