Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10962
Subject:
XM_006540684.3
Aligned Length:
1528
Identities:
1101
Gaps:
302

Alignment

Query    1  ---------------------------------ATGGATGAAAGGAACCGACAG---ACTTTAAGAAA--GAAA  36
                                             ||||||||.||||||||||||   |||||.|.|||  ||||
Sbjct    1  ATGGGGCGAAAGAAGATACAAATCACACGCATAATGGATGAGAGGAACCGACAGGTTACTTTTACAAAGCGAAA  74

Query   37  G------------------GCCTTAATG------GT------TGTG--------AGAGCCCTGAT---------  63
            |                  ||||  |||      ||      ||||        |.|||.||.||         
Sbjct   75  GTTTGGATTGATGAAGAAAGCCT--ATGAACTCAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAA  146

Query   64  ------------GCTG-------ACG------ATTACTTTGAGCACAGTC-----------CACT---------  92
                        ||||       |||      .|.||.|.|| ||.||||           ||||         
Sbjct  147  CAGCTCTAATAAGCTGTTTCAGTACGCTAGCACTGACATGGA-CAAAGTCCTTCTCAAATACACTGAGTATAAC  219

Query   93  -----------------------CTCG---------GAGG------------------ACAGA-----------  105
                                   ||||         ||||                  |||||           
Sbjct  220  GAGCCTCATGAAAGCAGGACGAACTCGGATATCGTTGAGGCTCTGAACAAGAAGGAACACAGAGGGTGCGACAG  293

Query  106  ---------------TTCA-----GCAAACT--AAAT---GAAGA---------------TAGTG----ATTTT  135
                           ||||     ||.||||  |.||   |||||               ||.||    ||||.
Sbjct  294  CCCAGACCCTGATACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGAATTTG  367

Query  136  ATTTTCAA-ACGAGG--------------CCCTCCTGGTCTGCCACCTCAGAACTTTTCAATGTCTGTCACAGT  194
            ||    || |.||.|              |.|.|||||..||||||||||||||||.|||||||||||||||||
Sbjct  368  AT----AATATGATGCGGAATCATAAAATCGCACCTGGCTTGCCACCTCAGAACTTCTCAATGTCTGTCACAGT  437

Query  195  TCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCTTTGGCAGCCA  268
            .||.|||||||||||.|||||||||||.|||||||||||||||||||||||.|||||.||.|||||||||||||
Sbjct  438  CCCTGTGACCAGCCCTAATGCTTTGTCGTACACTAACCCAGGGAGTTCACTCGTGTCACCGTCTTTGGCAGCCA  511

Query  269  GCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTCTCCTGGAGCT  342
            |||||||.|||.|||||||.||||||||.||||||||.|.|.||||..||||||||||||||||.||.||||||
Sbjct  512  GCTCAACATTAGCAGATTCGAGCATGCTGTCTCCACCCCCAGCCACGCTACATAGAAATGTGTCCCCAGGAGCT  585

Query  343  CCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGCCAAATGGAGC  416
            ||.|||||||||||||||||.||||.||||.||||||||||||||||||||||||||||.||||||||||||||
Sbjct  586  CCGCAGAGACCACCAAGTACCGGCAGTGCAAGTGGGATGTTGAGCACTACAGACCTCACGGTGCCAAATGGAGC  659

Query  417  TGGAAGCAGTCCAGTGGGGAATGGATTTGTAAACTCAAGAGCTTCTCCAAATTTGATTGGAGCTACTGGTGCAA  490
            |||||..|||||.||||||||||||||||||||||||||.||.||||||||||||||||||..|||||||||||
Sbjct  660  TGGAAATAGTCCTGTGGGGAATGGATTTGTAAACTCAAGGGCCTCTCCAAATTTGATTGGAAATACTGGTGCAA  733

Query  491  ATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTTGGAATGAACAGTAGG  564
            ||||.||||||||||||||||||||||||||||||||.||||||||||||||.|.||||||||||||||||.||
Sbjct  734  ATAGTTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCGCCACCAGGTGGTGGCAGTCTTGGAATGAACAGTCGG  807

Query  565  AAACCAGATCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCAC-------------------  619
            |||||||||||.|||||||||||.|||||.||||||||||||||||||||.||||                   
Sbjct  808  AAACCAGATCTACGAGTTGTCATTCCCCCATCAAGCAAGGGCATGATGCCCCCACTTTCGGAGGAAGAGGAATT  881

Query  620  -----TAAACACCCAAAGGATCAGTAGTTCTCAAGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACAA  688
                 |.||..||||||||||.||.||||||||||||||||||||||||||.||.||.||.|||||||||||||
Sbjct  882  GGAGTTGAATGCCCAAAGGATAAGCAGTTCTCAAGCCACTCAACCTCTTGCCACGCCTGTAGTGTCTGTGACAA  955

Query  689  CCCCAAGCTTGCCTCCGCAAGGACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGACC  762
            |.||.|||||||||||.||.|||||.||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct  956  CTCCGAGCTTGCCTCCACAGGGACTAGTGTACTCAGCAATGCCGACAGCCTACAACACTGATTACTCACTGACC  1029

Query  763  AGCGCTGACCTGTCAGCCCTTCAAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGCA  836
            ||||||||||||||.|||||.||||||||.|..||.||.|||||||||||.|||||.||||..||.||||||||
Sbjct 1030  AGCGCTGACCTGTCTGCCCTGCAAGGCTTTACTTCCCCTGGAATGCTGTCTCTGGGGCAGGCTTCAGCCTGGCA  1103

Query  837  GCAGCACCACCTAGGACAAGCAGCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTAT  910
            |||||||||.||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.|||||.|
Sbjct 1104  GCAGCACCATCTAGGACAAGCAGCCCTCAGCTCTCTGGTGGCTGGAGGGCAGTTATCTCAGGGTTCAAATTTGT  1177

Query  911  CCATTAATACCAACCAAAACATCAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATCG  984
            |||||||.||||||||.|||||||.|||.|||||.||.||.|||||||||||.||.|||.|.|||||||||||.
Sbjct 1178  CCATTAACACCAACCAGAACATCAACATTAAGTCAGAGCCAATTTCACCTCCCCGTGATAGAATGACCCCATCA  1251

Query  985  GGCTTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCCC  1058
            ||||||||.||||||||||||||                     |||||.||.||||||.|.|||||||||.||
Sbjct 1252  GGCTTCCAACAGCAGCAGCAGCA---------------------GCCACAACAGCAGCCACCGCCACAACCTCC  1304

Query 1059  GCAGCCCCAGCCCCGACAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGATG  1132
            .||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||
Sbjct 1305  ACAGCCCCAACCCCGGCAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCCAGCAGCTCCTATGATG  1378

Query 1133  GCAGTGATCGGGAGGATCCACGGGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGAC  1206
            |||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.|||||.|||||||||
Sbjct 1379  GCAGTGACCGGGAGGATCCACGGGGTGACTTCCATTCTCCAATTGTGCTTGGCCGACCTCCAAATACTGAGGAC  1452

Query 1207  AGAGAAAGCCCTTCTGTAAAGCGAATGAGGATGGACGCGTGGGTGACC  1254
            ||||||||||||||||||||.||.||||||||||||.|.|||||||||
Sbjct 1453  AGAGAAAGCCCTTCTGTAAAACGCATGAGGATGGACACATGGGTGACC  1500

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