Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10962
• Subject: XM_011521590.2
• Aligned Length: 1522
• Identities: 623
• Gaps: 869

Alignment

Query    1  ---------------------------------ATGGATGAAAGGAACCGACAG---ACTTT----AAGA----  30
                                             |||||||||||||||||||||   |||||    ||||    
Sbjct    1  ATGGGGCGGAAGAAAATACAAATCACACGCATAATGGATGAAAGGAACCGACAGGTCACTTTTACAAAGAGAAA  74

Query   31  -------------AAGAAAGGC------CTTAATG------GT---TGTGA-----------------------  53
                         |||||||.|      ||||.||      ||   |||||                       
Sbjct   75  GTTTGGATTAATGAAGAAAGCCTATGAACTTAGTGTGCTCTGTGACTGTGAAATAGCACTCATCATTTTCAACA  148

Query   54  -------------------------GAGCCCTGATGCTGACGA--TTACTT--------------------TG-  79
                                     .|||.|||||...|||.|  || |||                    || 
Sbjct  149  GCTCTAACAAACTGTTTCAATATGCTAGCACTGATATGGACAAAGTT-CTTCTCAAGTATACAGAATATAATGA  221

Query   80  ----------AGCACAGTCCACT---------------CTC----------GGAGGACAGA-------------  105
                      ||||.|..|.|||               |||          |||..|||||             
Sbjct  222  ACCTCATGAAAGCAGAACCAACTCGGATATTGTTGAGGCTCTGAACAAGAAGGAACACAGAGGGTGCGACAGCC  295

Query  106  -------------TTCA-----GCAAACT--AAAT---GAAGA---------------TAGTG----ATTTTAT  137
                         ||||     ||.||||  |.||   |||||               ||.||    ||||.||
Sbjct  296  CAGACCCTGATACTTCATATGTGCTAACTCCACATACAGAAGAAAAATATAAAAAAATTAATGAGGAATTTGAT  369

Query  138  TTTCAA-ACGAGGC-----CCT---------------------CCTGGTCTGCCACCTCAGAACTTTTCAATGT  184
                || |.||.||     |.|                     |||||||||||||||||||||||||||||||
Sbjct  370  ----AATATGATGCGGAATCATAAAATCGCAGTGAGTACTAAACCTGGTCTGCCACCTCAGAACTTTTCAATGT  439

Query  185  CTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCT  258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  440  CTGTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCCCATCT  513

Query  259  TTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTC  332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  514  TTGGCAGCCAGCTCAACGTTAACAGATTCAAGCATGCTCTCTCCACCTCAAACCACATTACATAGAAATGTGTC  587

Query  333  TCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGC  406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  588  TCCTGGAGCTCCTCAGAGACCACCAAGTACTGGCAATGCAGGTGGGATGTTGAGCACTACAGACCTCACAGTGC  661

Query  407  CAAATGGAGCTGGAAGCAGTCCAGTGGGGAATGGATTTGTAAACTCAAGAGCTTCTCCAAATTTGATTGGAGCT  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  662  CAAATGGAGCTGGAAGCAGTCCAGTGGGGAATGGATTTGTAAACTCAAGAGCTTCTCCAAATTTGATTGGAGCT  735

Query  481  ACTGGTGCAAATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTTGGAAT  554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  736  ACTGGTGCAAATAGCTTAGGCAAAGTCATGCCTACAAAGTCTCCCCCTCCACCAGGTGGTGGTAATCTTGGAAT  809

Query  555  GAACAGTAGGAAACCAGATCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACTAAACACCC  628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |.|.||
Sbjct  810  GAACAGTAGGAAACCAGATCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACT--AGATCC  881

Query  629  AA---AGGAT----CAGTAGTTCTCAAGCCACTCA-ACCTCTTGCTACCCCAGTCGTGTCTGTGACAACCCCAA  694
            ||   |||||    ||.||  |.|..|| ||.||| ..|||||                               
Sbjct  882  AATCCAGGATACCACATTA--TATTTAG-CAATCATGTCTCTT-------------------------------  921

Query  695  GCTTGCCTCCGCAAGGACTTGTGTACTCAGCAATGCCGACTGCCTACAACACTGATTATTCACTGACCAGCGCT  768
                                                                                      
Sbjct  922  --------------------------------------------------------------------------  921

Query  769  GACCTGTCAGCCCTTCAAGGCTTCAACTCGCCAGGAATGCTGTCGCTGGGACAGGTGTCGGCCTGGCAGCAGCA  842
                                                                                      
Sbjct  922  --------------------------------------------------------------------------  921

Query  843  CCACCTAGGACAAGCAGCCCTCAGCTCTCTTGTTGCTGGAGGGCAGTTATCTCAGGGTTCCAATTTATCCATTA  916
                                                                                      
Sbjct  922  --------------------------------------------------------------------------  921

Query  917  ATACCAACCAAAACATCAGCATCAAGTCCGAACCGATTTCACCTCCTCGGGATCGTATGACCCCATCGGGCTTC  990
                                                                                      
Sbjct  922  --------------------------------------------------------------------------  921

Query  991  CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCCGCCACCACCGCAGCCCCAGCCACAACCCCCGCAGCC  1064
                                                                                      
Sbjct  922  --------------------------------------------------------------------------  921

Query 1065  CCAGCCCCGACAGGAAATGGGGCGCTCCCCTGTGGACAGTCTGAGCAGCTCTAGTAGCTCCTATGATGGCAGTG  1138
                                                                                      
Sbjct  922  --------------------------------------------------------------------------  921

Query 1139  ATCGGGAGGATCCACGGGGCGACTTCCATTCTCCAATTGTGCTTGGCCGACCCCCAAACACTGAGGACAGAGAA  1212
                                                                                      
Sbjct  922  --------------------------------------------------------------------------  921

Query 1213  AGCCCTTCTGTAAAGCGAATGAGGATGGACGCGTGGGTGACC  1254
                                                      
Sbjct  922  ------------------------------------------  921