Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11019
- Subject:
- NM_001174154.2
- Aligned Length:
- 2757
- Identities:
- 162
- Gaps:
- 2577
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAATTTTCCTGGGGAAGTGGCCAGGAATCCCAGCGCTTGCTTCTTTCTTTTCTGCTTCTTGCAATCTGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCAGGGAACAGCCAGATCCACTACTCCATCCCTGAGGAGGCCAAACACGGCACCTTCGTGGGCCGCATCGCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGACCTGGGGCTGGAGCTGACGGAGCTGGTGCCCCGCCTGTTCAGAGTGGCGTCCAAGGACCGCGGAGACCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGGGAGGAGCTGTGCGGGCGGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGTTGCAGGTTTTCCACGTGGAGGTGGAGGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGACATTAACGACAACCCTCCCAGGTTCCCAACAACACAAAAGAATCTGTTCATTGCAGAATCAAGGCCACTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACACTTGGTTTCCACTAGAGGGCGCTTCAGACGCAGATATCGGAATCAATGCTGTACTGACTTACAGACTGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCAAATGATTACTTTTCTTTGGAAAAACCATCCAACGACGAACGGGTAAAAGGTCTTGGACTTGTATTACGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATCTTTAGACCGGGAGGAAACTCCAGAGATAATTTTAGTGCTTACTGTCACGGACGGAGGAAAGCCAGAGCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCGGCAGTGTTCAGTTACTCATCACTGTGCTGGATGCCAATGATAATGCTCCAGTTTTTGACAGATCTCTGTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TACCGTGAAATTACCAGAAAACGTTCCAAATGGGACATTGGTAGTCAAAGTCAATGCCTCAGATTTAGACGAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGGTAAATGGGGATATTATGTACTCATTTTCTACAGATATTTCACCAAATGTGAAATACAAATTCCACATAGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGTTAGCGGAGAGATTATTGTAAAGGGATACATTGATTTTGAAGAATGCAAATCCTATGAAATTCTCATAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGAATTGACAAGGGACAACTTCCACTCTCTGGGCACTGTAAAGTCATTGTACAAGTTGAAGACATCAACGATA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGTTCCAGAATTGGAATTCAAATCTCTATCACTTCCAATACGAGAGAATTCTCCAGTGGGCACTGTCATCGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCATTAGTGTGTCTGATCGGGACACGGGTGTCAACGGGCAGGTGACCTGCTCCCTGACAAGTCATGTCCCCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAAGTTGGTGTCCACATTCAAGAATTACTATTCGCTCGTGCTGGACAGCGCCCTGGACAGAGAGACAACAGCGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACTATAAGGTGGTGGTGACAGCGCGGGATGGGGGCTCTCCCTCGCTGTGGGCCACGGCTAGCGTGTCTGTTGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTTGCTGACGTGAACGACAATGCACCTGTGTTCGCGCAGCCCGAATACACGGTGTTCGTGAAGGAGAACAACCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCTGGTGCGCACATCTTCACGGTGTCAGCGATGGATGCGGACGCACAGGAGAACGCGCTGGTGTCCTACTCGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGGTGGAGCGGAGGGTGGGCGAGCGCTTGCTGTCGAGCTATGTGTCTGTGCACGCGGAGAGCGGCAAGGTGTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCGCTGCAGCCTCTGGACCATGAGGAGCTGGAGCTGCTGCGGTTCCAGGTGAGCGCGCGGGATGCTGGTGTACC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCCCTGGGCAGCAATGTGACTCTGCAGGTGTTTGTGCTGGACGAGAATGACAACGCGCCCACACTGCTGGAAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTGAGGCAGGAGTCTCTGGTGGAATCGTGAGCCGGTTGGTGTCCAGATCAGTGGGTGCAGGCCATGTGGTGGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGGTGCGCGCGGTGGATGCAGACTCTGGCTATAATGCATGGCTCTCTTATGAGCTGCAATCGTCAGAAGGCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTCCCGTAGCCTTTTCCGCGTAGGTTTGTATACGGGCGAGATTAGTACTACGCGCATACTGGATGAAGCAGATT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGCCACGTCAGCGCCTTCTGGTGCTGGTGAAGGACCATGGTGACCCAGCAATGATTGTTACCGCCACAGTGTTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTGTCTCTGGTAGAGAATGGCCCGGTACCAAAGGCTCCATCGCGAGTATCCACGAGTGTCACACACTCTGAGGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTCACTGGTGGATGTCAACGTGTACCTGATCATTGCCATCTGTGCAGTGTCCAGCCTGCTAGTGCTCACGCTGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGCTGTACACAGCGCTGCGCTGTTCCACTGTCCCCAGTGAGAGCGTGTGCGGGCCTCCAAAACCGGTAATGGTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGCTCCAGTGCAGTGGGGAGCTGGTCATACTCCCAACAAAGGAGGCAAAGGGTGTGCTCTGGGGAGTACCCACC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAGACCGACCTCATGGCCTTCAGCCCCAGTTTATCTGATTCAAGGGACAGAGAGGATCAATTGCAGTCTGCAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGGATTCCTCTGGAAAGCAAGCCCCGCCCAACACTGACTGGCGTTTCTCTCAAGCCCAGAGACCCGGCACGAGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGATCCCAAAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGAT 2516
Query 1 -------------------------------------------------------------ATGGGATTGAGCG 13
|||||..||||||
Sbjct 2517 CTTGGCCTCTGCCAGCGAAGCTGCTGATGGGAGCTCTACCCTGGGAGGGGGCGCTGGCACCATGGGTCTGAGCG 2590
Query 14 CCCGCTACGGACCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAAT 87
|.||.||||||||||||||.|||||||||||||||||.||||||||||||||.||.||||||||.|||||||||
Sbjct 2591 CTCGATACGGACCCCAGTTTACCCTGCAGCACGTGCCTGACTACCGCCAGAACGTGTACATCCCTGGCAGCAAT 2664
Query 88 GCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTC 161
|||||.||||||||.||.||||||||.||.|||||||||||.|||||||||||.|||||||||||||||||.||
Sbjct 2665 GCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAATC 2738
Query 162 GGGCAAGAAGGAGAAGAAG 180
|||||||||.|||||||||
Sbjct 2739 GGGCAAGAAAGAGAAGAAG 2757
