Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11019
- Subject:
- NM_001301256.1
- Aligned Length:
- 2781
- Identities:
- 162
- Gaps:
- 2601
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAACAAAGCAAGAAGTATTTGAAATGGATTTTACCACTGAAGGCCGACTGGGAACACGGTGTATGCTGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGCTCCTGCTCCTCGCAGCCTGGGAGGCAGGGAGCGGCCAGCTTCATTACTCCGTCCCAGAGGAGGCCAAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGGCACCTTCGTGGGCCGCATCGCGCAGGACCTGGGGCTGGAGCTGACGGAGCTGGTGCCCCGCCTGTTCAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGGCGTCCAAGGACCGCGGGGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGACCGGGAGGAGCTGTGCGGGCGGAGCGTGGAGTGTAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGTTTTCCACGTGGAGGTGGAGGTGAGGGACATTAATGATAACCCGCCTGTGTTCTCAGTAAAGGAGCAAAGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGTTAATTTACGAATCTAGGCTGCCAGATTCTTTGTTTCCACTAGAGGGCGCATCAGATGCTGATGTTGGATT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAATTCTATGTTAACCTATAAACTCAGTCCCAGCGAATACTTTGGGCTAGATGTGAAATCAAACAGCGATGGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAAACAAATTAGACTCTTGTTGAAAAAATCCTTGGACAGAGAGGATGCTCCTGAGCATAAGCTACTGCTGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCACGGATGGAGGCAAACCTGAGCTCACAGGCTCTGTTCAGCTGCTGGTCACTGTGCTGGATGTGAATGATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGCCCCTACTTTCCAGCACCCTGAGTATGAAGTGAGAATCTTGGAAAACTCAGACAACGGAACGACAGTTATTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACTGAATGCTTCTGACAAGGATGAAGGGACGAATTCAGCAATTTCGTACTCTTTTAATAGACTGGTGCCGCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGACTCTTGAGCAGTTTAGCATAGATGCAGATACAGGAGAAATCATAACTCAAGGAAATTTGGACTTTGAGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTAGATGTCTACAAAATCCACGTTGATGCGACGGACAAAGGACACCCTCCGATGGTGGGCCATTGCACTGTTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAGTGAAGGTATTGGATGAGAACGACAATGTGCCTCAGATCACTTTGACTTCCTTATCCCTGCCTGTTCGAGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACGCTGCACTGAGTACTGTCATTGCTCTAATTAGCGTTTCGGATCTGGACTCTGGATCCAACGGGCAGGTGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTGCTCCCTGAGTCCTCATGTCCCCTTCAAGTTGGTGTCCACCTTCAAGAATTACTATTCGCTTGTGTTGGACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCGCCCTGGACCGAGAGACCACAGCTGACTATCAGGTGGTGGTGACAGCGCGGGACGGGGGTTCTCCTTCTTTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGACCACGGCTAGCGTGTCTGTGGAGGTGGCCGATGTGAACGACAATGCGCCTTCATTTGCGCAGCCTGATTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACGGTGTTCGTGAAGGAGAACAACCCTCCTGGAGCGCACATCTTCACAGTATCGGCGATGGACGCGGATGCGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGAGAACGCGCTGGTGTCCTACTCGCTGGTGGAGCGGAGGGTGGGCGAGCGCTTGCTGTCGAGCTATGTGTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGCACGCGGAAAGCGGCAAGGTGTTCGCTCTGCAGCCTCTGGACCATGAGGAGCTGGAACTGCTGCAGTTCCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTGAGCGCGCGGGATGCTGGTGTGCCTGCCCTGGGCAGCAATGTGACTCTGCAGGTGTTTGTGCTGGATGAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACGACAATGCGCCCACGCTGCTTGGACCTTGGACACCAGGATCTGGTGGTGTAGTGAGCGAACTTGTGTCACCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCAGTGGGTGCTGGCCAGGTGGTCACAAAGGTGCGTGCAGTAGATGCGGATTCTGGCTATAATGCCTGGCTGTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTATGAGCTGCATCCTTTAGCAGGTGGAACGCGGAGTCTGTTTAGGGTAGGTCTGTACACGGGCGAGATCAGTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCACGCGTGCCCTTGAGGAGGCAGATGCACCACGCCATCGCCTATTAGTGCTGGTGAAGGACCACGGGGAGCCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCGCTGATTGCCACAGCCACTGTGTTAGTGTCTCTGGTTGAGAACAGCCAGACTCCAAAAGCCTCTTCGCGAGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCAAGGTGCCACTGGCCAGGAAGTTTCGTTAGTGAATGTCAACGTGTACCTGATCATTGCCATCTGTGCGGTGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCAGCCTACTAGTTCTAACCCTCATGGTATACACCGCACTGCGGTGCTCAGTTCCACCTACAGAGGGTGTGTGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGGGCAGGGAAGCCTGTGCTGGTGTGCTCTAGTGCGGTAGGGAGCTGGTCCTACTCACAGCAGAGGAGACAGAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGTTTGTTCTGGAGAGGGACCACCCAAAACCGATCTCATGGCCTTCAGCCCGAGTCTTCCTCCTTGTCCGGTTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGGGTGAGCATCAGGATTTGAACGACGATCATTGCTCAAGACAAGCCCCGCCCAACACTGACTGGCGTTTCTCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAAGCCCAGAGACCCGGCACGAGCGGATCCCAAAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCTGCTGATGGGAGCTCTACCCTGGGAGGGG 2590
Query 1 -----------ATGGGATTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAG 63
|||||..|||||||.||.||||||||||||||.|||||||||||||||||.||||||||||||
Sbjct 2591 GCGCTGGCACCATGGGTCTGAGCGCTCGATACGGACCCCAGTTTACCCTGCAGCACGTGCCTGACTACCGCCAG 2664
Query 64 AATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGG 137
||.||.||||||||.||||||||||||||.||||||||.||.||||||||.||.|||||||||||.||||||||
Sbjct 2665 AACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAGG 2738
Query 138 TGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAG 180
|||.|||||||||||||||||.|||||||||||.|||||||||
Sbjct 2739 TGGTAATGGCAACAAGAAGAAATCGGGCAAGAAAGAGAAGAAG 2781
