Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11019
- Subject:
- NR_160734.1
- Aligned Length:
- 3234
- Identities:
- 162
- Gaps:
- 3054
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGTGGAGCGTTTGGGTTTTCTTCCTGGTTGGAAGTAATTCGCGAAGCCTCCTCCCTTCACACTGGTGCGGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGGATGGAGCGCAGCAGCGTGAAGCTAGGGAGCAGGACCCCGTGGAGGCAAGTACTCTTTCCCTTCTTGCTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTTGTTCTGCACGGGGCTCTCAGAGCAAGTCCGGTACTCTATTCCGGAAGAAATGGCCATGGGTTCAGTCGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAAATCTCGCTGAGGACCTGGGGCTGCCTGTTCAGGACTTACTGACAAGAAACCTTAGAGTTATTGCAGAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCGTATCTTTCTGTGAACCCAGAGAACGGGAACATAGTTGTGAGCGACAGAATAGACCGAGAGTTTCTCTGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCAAAGCCCTCTGTGCGTCCTGCCCTTAGAGATTGTGGCAGAAAATCCCCTAAACGTTTTTCACGTCAGCGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGATAGAAGATATAAATGATAACCCTCCCCGTTTCCTCCAAAATAGCATTGTTTTGCAAATCAATGAACTTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATTCCAGGCACTAGGTTTGGCCTGGAATCTGCCATAGATGCAGATGTAGGGCTGAACTCTCTCCAGAGTTACC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACTCAGTTTGAATGAGCACTTCTCTCTGGTGGTAAAGGACAACACTGAAGGAAAGGATGCCCCCGAATTAGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGGAGAAGCCTCTGGACAGGGAAAAACAGAGCTCCCAGCTCTTGGTCCTAACCGCAGTAGATGGGGGAGAACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGTCCTAACGGGCACCGCTCAGATTCAGATCGAGGTCACTGATGCCAATGATAACCCCCCAGTGTTCAGCCAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTACGTACAAAGTCAGTCTTAGAGAGGACATGGCCGCAGGCACGTCTGTGCTAACAGTGATAGCCACTGACCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATGAGGGTGTCAACGCAGAAGTCACCTACTCCTTCAAATCACTAGGAGAAGATATTAGAGATAAGTTTATCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGATCATCAAAGTGGAGAAATTAAATCCAAAGGCCCTATTGACTTTGAAACCAAGAGGACTTACACCATGAACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAGAGGCCAAGGACGGTGGAGGCATGGCCTCAGAATGTAAAGTTGTAGTGGAAATTCTCGATGAGAACGACAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCCCAGAAGTGGTTTTTACTTCCGTGTCCAATTCTATAACCGAAGATGCAGAACCGGGGACAGTGGTGGCTCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTTCAAAACGTATGATAAAGATTCAGAAGAAAATGGAAGAGTGAGTTGCTTCGTAAAAGAAACGGTTCCTTTTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGATTGAATCTTCTGCCAGCAATTACTATAAGCTTGTAACAGATGGGATCCTGGACCGGGAGCAGACTCCAGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TACAACGTCACCATCATCGCCACTGATAAAGGCAAGCCCCCTCTCTCTTCCAGCACAAGCGTTACCCTGCATGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGGGATATCAATGACAATGCTCCAGTTTTCCACCAGACCTCCTATTTGATCCAAGTGGCTGAGAACAACCCTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGGAGCTTCCATTGCTCAGGTCAGCGCCTTCGACCCGGATTTGGGATCCAATGGTTTCATCTCCTACTCCATC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATAGCCAGCGACCTAGAGCCTAAATCACTGTGGTCCTACGTGTCGGTGAACCAGGATAGTGGCGTGGTGTTCGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCAGCGCGCCTTCGACCACGAACAGCTGCGCTCCTTCCAGCTGACACTGCAGGCGCGCGACCAGGGAAAGCCCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CGCTCAGCGCCAACGTGAGCATGCGGGTGCTGGTGGGTGACCGCAACGACAACGCGCCACGCGTGCTGTATCCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACACTCGAGCCCGACGGCTCTGCGCTCTTCGACATGGTGCCGCGTGCTGCCGAGCCCGGATACCTGGTCACCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGTGGTGGCGGTGGATGCAGACTCTGGACACAATGCCTGGCTATCTTACCACGTGCTGCAGGCCAGCGATCCCG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGCTCTTCAGCCTGGGACTGCGCACAGGCGAGGTGCGCACAGCGCGTGCCCTGGGAGACAGGGACTCAGCGCGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGCGCCTTCTGGTCGCTGTGCGTGATGGTGGACAACCACCGCTCTCGGCTACAGCCACGCTGCACCTCATCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CGCTGACAGCCTGCAGGAGGTCCTGCCAGACCTCAGAGATGAACCTTTGCTGTCTGACTCCCAAAGTGAGCTTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGTTTTACCTGGTGGTGGCCTTGGCCTTGGTCTCAGTGCTCTTTCTTTTCGTTGTGATCCTGGCCATTGTCCTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CGCCTTCGACAGTCCCATGGTCCTGCTGTCTCAGACTATTTTCAGTCGGGCCTCTGCTGTAAGACGAGACCAGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGTTTCTCTCAACTAAGGCGAGGGGACTCTTCCTTATTCCTACAATCTCTATGTTGCCTCCAATTGTCAAAAGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAATTTCTCAATTTCTTACCTTGACTCCAGAAATGGTCCCTCCGCGAGACCTTTGTACGGAAGCTTCTGTAGCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTGAGTGTCGCTGAGGAGAATAACAAGATAGTCTCGGATTCTATTGCTTCTAATCACCAAGCCCCGCCCAACAC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGACTGGCGTTTCTCTCAAGCCCAGAGACCCGGCACGAGCGGATCCCAAAATGGTGATGAAACTGGCACCTGGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTTGGCCTCTGCCAGCGAAGCTGCTGATGGGAGC 2664
Query 1 ---------------------------ATGGGATTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCACGT 47
|||||..|||||||.||.||||||||||||||.||||||||||||||
Sbjct 2665 TCTACCCTGGGAGGGGGCGCTGGCACCATGGGTCTGAGCGCTCGATACGGACCCCAGTTTACCCTGCAGCACGT 2738
Query 48 GCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAGCGGGATG 121
|||.||||||||||||||.||.||||||||.||||||||||||||.||||||||.||.||||||||.||.||||
Sbjct 2739 GCCTGACTACCGCCAGAACGTGTACATCCCTGGCAGCAATGCCACGCTGACCAATGCCGCTGGCAAACGAGATG 2812
Query 122 GCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAG--------------- 180
|||||||.|||||||||||.|||||||||||||||||.|||||||||||.|||||||||
Sbjct 2813 GCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGGCAAGAAAGAGAAGAAGTAATATGGAGGCCAG 2886
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2887 GCCTTGAACCACAAGGCAGCCTCCCTCCCCAGCCAGTCCAGCTCGTCCTTACTTGTACCCAGGCCTCAGAATTT 2960
Query 181 -------------------------------------------------------------------------- 180
Sbjct 2961 CAGGGCTCACCCCAGGATACTGGTAGGAGCCAGGGCCATGCTCCCCGTTGGGAAACAGAAACACGTGCCCAAGC 3034
Query 181 -------------------------------------------------------------------------- 180
Sbjct 3035 CAACACCCCCTCTCTATACCCTAGGGAGTTGAATATGCAAAGAGAGTTCTGCTGGGACCCCCCTATTCAATCAG 3108
Query 181 -------------------------------------------------------------------------- 180
Sbjct 3109 TGATTGTACCCACATGGGTAGCAGGGTTTGTGTGTGTGGACATACACACACACACACACACACACACACACAAA 3182
Query 181 ---------------------------------------------------- 180
Sbjct 3183 CCATGCCACACTCCCTTAGTTACAGCTGAACTCCTCCATCTTCCAACCCAGG 3234
