Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11023
Subject:
XM_006517646.3
Aligned Length:
2246
Identities:
421
Gaps:
1777

Alignment

Query    1  ATGGCTCAGCAGACAAGCCCGGACACTTTAACAGTACCTGAAGTGGATAATCCGCATTGTCCAAACCCGTGGCT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAACGAAGACCTTGTGAAATCCTTGCGAGAAAACCTGTTGCAGCATGAGAAGTCCAAGACAGCGAGGAAATCGG  148
                                                                                 ||.|.
Sbjct    1  ---------------------------------------------------------------------ATGGC  5

Query  149  TTTCTCCCAAGCTCTCTCCAGTGATCTCTCCGAGAAATTCCCCCAGGCTTCTGCGCAGAATGCTTCTCAGCAGC  222
            |||                     |.|||..||     |||||..||..|   |||||  |||       |||.
Sbjct    6  TTT---------------------TGTCTGGGA-----TCCCCTGGGAGT---CGCAG--TGC-------CAGG  41

Query  223  AACATCCCCA--------AACAGCG---GCGTT--TCACGGTGGCACATACATGTTTTGATGTGGACAATGGCA  283
            |.||||.|||        |||| .|   |||||  |||..||    |.|||| ||||.||||||||||||||||
Sbjct   42  ACCATCTCCAAGAACTAGAACA-AGATTGCGTTTCTCAAAGT----CCTACA-GTTTCGATGTGGACAATGGCA  109

Query  284  CATCTGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGATCCGGGCTAATTCTCCAAGCAAATTTTGTC  357
            ||||.||||||||||||||||||||||||||||||||||||||.||.|||||.||||||||||||||.||||||
Sbjct  110  CATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGTCTGGGCTGATTCTCCAAGCAAACTTTGTC  183

Query  358  CACAGTCAACGACGGGAGTCCTTCCTGTATCGATCCGACAGCGATTATGACCTCTCTCCAAAGTCTATGTCCCG  431
            |||||||||||.|||||||||||||||||.|||||.||||||||.|||||||||||||||||||||||||||.|
Sbjct  184  CACAGTCAACGCCGGGAGTCCTTCCTGTACCGATCTGACAGCGACTATGACCTCTCTCCAAAGTCTATGTCCAG  257

Query  432  GAACTCCTCCATTGCCAGTGATATACACGGAGATGACTTGATTGTGACTCCATTTGCTCAGGTCTTGGCCAGTC  505
            |||||||||.|||||||||||||||||.||||||||||||||||||||.||.|||||||||||||||||.||.|
Sbjct  258  GAACTCCTCGATTGCCAGTGATATACATGGAGATGACTTGATTGTGACCCCGTTTGCTCAGGTCTTGGCTAGCC  331

Query  506  TGCGAACTGTACGAAACAACTTTGCTGCATTAACTAATTTGCAAGATCGAGCACCTAGCAAAAGATCACCCATG  579
            |||||||.|||||.||||||||||||||.|||||.|||||||||||.||||||||.||||||||||||||||||
Sbjct  332  TGCGAACCGTACGGAACAACTTTGCTGCGTTAACGAATTTGCAAGACCGAGCACCCAGCAAAAGATCACCCATG  405

Query  580  TGCAACCAACCATCCATCAACAAAGCCACCATAACAG----------------------------GATCCTGGA  625
            ||||||||||||||||||||||||||||||||.||||                            ||.||||||
Sbjct  406  TGCAACCAACCATCCATCAACAAAGCCACCATCACAGAGGAGGCCTACCAGAAACTGGCCAGCGAGACCCTGGA  479

Query  626  -----TGGAAT------TGAACC--------------CATA--------TACGTTACTTGACATG---------  657
                 ||||.|      ||.|||              ||.|        |.|||.| .|||.|||         
Sbjct  480  GGAGCTGGACTGGTGTCTGGACCAGCTAGAGACCCTGCAGACCAGGCACTCCGTCA-GTGAGATGGCCTCCAAC  552

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct  553  AAGTTCAAAAGGATGCTGAACCGGGAGCTCACGCATCTCTCTGAGATGAGTCGGTCTGGCAACCAGGTGTCGGA  626

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct  627  GTACATCTCAAACACATTTCTCGATAAGCAACATGAAGTGGAAATCCCCTCTCCAACTCAGAAGGAAAAGGAGA  700

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct  701  AGAAGAAAAGGCCGATGTCGCAGATCAGTGGGGTCAAGAAGTTGATGCACAGCTCCAGCCTAACTAATTCATGT  774

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct  775  ATCCCCAGGTTTGGGGTTAAAACGGAGCAGGAAGATGTCCTGGCCAAGGAACTAGAAGATGTGAACAAGTGGGG  848

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct  849  CCTCCACGTTTTCCGAATAGCAGAGCTGTCTGGTAACCGGCCTCTGACTGTTATCATGCACACCATTTTTCAGG  922

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct  923  AACGAGATTTGTTAAAAACGTTTAAAATCCCAGTAGACACTTTGATTACGTATCTTATGACTCTGGAAGACCAT  996

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct  997  TACCATGCTGACGTGGCCTATCACAACAACATCCATGCTGCAGACGTCGTCCAGTCCACTCACGTGCTGCTCTC  1070

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1071  TACACCCGCTTTGGAGGCTGTGTTCACAGACTTGGAGATTCTCGCGGCCATTTTTGCCAGTGCAATACATGATG  1144

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1145  TGGACCATCCTGGGGTGTCAAATCAATTTCTGATCAATACAAACTCGGAACTCGCTCTGATGTACAACGACTCC  1218

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1219  TCGGTCCTAGAGAACCATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTCCAGAA  1292

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1293  TCTGACCAAAAAGCAAAGACAATCTTTAAGGAAAATGGTCATTGACATTGTCCTGGCGACAGACATGTCGAAGC  1366

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1367  ACATGAACCTGCTGGCTGATCTGAAAACCATGGTTGAAACCAAGAAGGTGACAAGCTCCGGCGTCCTCCTCCTG  1440

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1441  GATAACTACTCCGACAGGATCCAGGTCCTTCAGAATATGGTGCACTGTGCAGACCTGAGCAACCCCACAAAGCC  1514

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1515  ACTCCAGCTGTACCGCCAGTGGACGGACCGGATAATGGAGGAGTTCTTCCGCCAGGGGGACCGAGAGCGGGAGC  1588

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1589  GTGGCATGGAGATAAGTCCCATGTGTGACAAGCACAACGCCTCTGTGGAAAAATCACAGGTGGGCTTCATAGAC  1662

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1663  TATATCGTTCATCCACTCTGGGAGACGTGGGCAGACCTCGTACATCCCGATGCCCAGGACATCTTGGACACTTT  1736

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1737  GGAGGACAATCGTGAGTGGTACCAGAGCACAATCCCCCAGAGCCCCTCCCCTGCACCTGATGACCAAGAGGAGG  1810

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1811  GCCGGCAGGGACAGACTGAAAAATTCCAGTTTGAACTAACCTTGGAGGAAGACTGCGAGTCAGACACTGAAAAG  1884

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1885  GACAGTGGAAGTCAGGTGGAGGAAGACACTAGCTGCAGTGACTCTAAGACTCTGTGCACCCAAGACTCAGAGTC  1958

Query  658  --------------------------------------------------------------------------  657
                                                                                      
Sbjct 1959  CACTGAAATTCCCCTTGACGAGCAGGTTGAGGAGGAAGCTGTAGCGGAAGAGGAAAGCCAGCCTGAAACTTGCG  2032

Query  658  --------------------------  657
                                      
Sbjct 2033  TCCCAGATGACTGCTGTCCTGATACG  2058

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