Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11038
- Subject:
- NM_001321044.2
- Aligned Length:
- 2196
- Identities:
- 478
- Gaps:
- 1701
Alignment
Query 1 ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAACAATTGCCTGCGGCAACAGTTCGACTCCTTTCAAGTTCTCAGATCATCACTTCGGTGGTCAGTGTTGT 74
Query 75 AAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAAAGAGCTTATTGAAAACTCCTTGGATGCTGGTGCCACAAGCGTAGATGTTAAACTGGAGAACTATGGATTTG 148
Query 149 ATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATAAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGTTGATGCACCTGTAATGGCAATGAAGTACTAC 222
Query 223 ACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACCTCAAAAATAAATAGTCATGAAGATCTTGAAAATTTGACAACTTACGGTTTTCGTGGAGAAGCCTTGGGGTC 296
Query 297 AATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AATTTGTTGTATAGCTGAGGTTTTAATTACAACAAGAACGGCTGCTGATAATTTTAGCACCCAGTATGTTTTAG 370
Query 371 ATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAG-------------------------- 418
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGGCAGTGGCCACATACTTTCTCAGAAACCTTCACATCTTGGTCAAGGTACAACTGTAACTGCTTTAAGATTA 444
Query 419 ---------------GTAAGAAAGTAGCTT------------------TGTA----------TACAAACAT--- 446
|||||||||.||.|| |||| .|.|||.||
Sbjct 445 TTTAAGAATCTACCTGTAAGAAAGCAGTTTTACTCAACTGCAAAAAAATGTAAAGATGAAATAAAAAAGATCCA 518
Query 447 --------TCTTTACCTTT------------TCTGTCTTA---ATTG--TTGGTTTAAAAAAAAAAAAGTTA-C 494
||.|.|.|||| .|||.|||| |||| ||.|| |.|.||.||.|.||| |
Sbjct 519 AGATCTCCTCATGAGCTTTGGTATCCTTAAACCTGACTTAAGGATTGTCTTTGT---ACATAACAAGATTTATC 589
Query 495 TCGG---------------------------------------------------------------------- 498
||.|
Sbjct 590 TCAGTGGATTTCTTCCAAAGTGTGATGCAGACCACTCTTTCACTAGTCTTTCAACACCAGAAAGAAGTTTCATC 663
Query 499 -------------------------------------------------------------------------- 498
Sbjct 664 TTCATAAACAGTCGACCAGTACATCAAAAAGATATCTTAAAGTTAATCCGACATCATTACAATCTGAAATGCCT 737
Query 499 -------------------------------------------------------------------------- 498
Sbjct 738 AAAGGAATCTACTCGTTTGTATCCTGTTTTCTTTCTGAAAATCGATGTTCCTACAGCTGATGTTGATGTAAATT 811
Query 499 -------------------------------------------------------------------------- 498
Sbjct 812 TAACACCAGATAAAAGCCAAGTATTATTACAAAATAAGGAATCTGTTTTAATTGCTCTTGAAAATCTGATGACG 885
Query 499 -------------------------------------------------------------------------- 498
Sbjct 886 ACTTGTTATGGACCATTACCTAGTACAAATTCTTATGAAAATAATAAAACAGATGTTTCCGCAGCTGACATCGT 959
Query 499 -------------------------------------------------------------------------- 498
Sbjct 960 TCTTAGTAAAACAGCAGAAACAGATGTGCTTTTTAATAAAGTGGAATCATCTGGAAAGAATTATTCAAATGTTG 1033
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1034 ATACTTCAGTCATTCCATTCCAAAATGATATGCATAATGATGAATCTGGAAAAAACACTGATGATTGTTTAAAT 1107
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1108 CACCAGATAAGTATTGGTGACTTTGGTTATGGTCATTGTAGTAGTGAAATTTCTAACATTGATAAAAACACTAA 1181
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1182 GAATGCATTTCAGGACATTTCAATGAGTAATGTATCATGGGAGAACTCTCAGACGGAATATAGTAAAACTTGTT 1255
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1256 TTATAAGTTCCGTTAAGCACACCCAGTCAGAAAATGGCAATAAAGACCATATAGATGAGAGTGGGGAAAATGAG 1329
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1330 GAAGAAGCAGGTCTTGAAAACTCTTCGGAAATTTCTGCAGATGAGTGGAGCAGGGGAAATATACTTAAAAATTC 1403
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1404 AGTGGGAGAGAATATTGAACCTGTGAAAATTTTAGTGCCTGAAAAAAGTTTACCATGTAAAGTAAGTAATAATA 1477
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1478 ATTATCCAATCCCTGAACAAATGAATCTTAATGAAGATTCATGTAACAAAAAATCAAATGTAATAGATAATAAA 1551
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1552 TCTGGAAAAGTTACAGCTTATGATTTACTTAGCAATCGAGTAATCAAGAAACCCATGTCAGCAAGTGCTCTTTT 1625
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1626 TGTTCAAGATCATCGTCCTCAGTTTCTCATAGAAAATCCTAAGACTAGTTTAGAGGATGCAACACTACAAATTG 1699
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1700 AAGAACTGTGGAAGACATTGAGTGAAGAGGAAAAACTGAATCTTTTTAATGGATCTCATTATTTAGACGTTTTA 1773
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1774 TATAAAATGACAGCAGATGACCAAAGATACAGTGGATCAACTTACCTGTCTGATCCTCGTCTTACAGCGAATGG 1847
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1848 TTTCAAGATAAAATTGATACCAGGAGTTTCAATTACTGAAAATTACTTGGAAATAGAAGGAATGGCTAATTGTC 1921
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1922 TCCCATTCTATGGAGTAGCAGATTTAAAAGAAATTCTTAATGCTATATTAAACAGAAATGCAAAGGAAGTTTAT 1995
Query 499 -------------------------------------------------------------------------- 498
Sbjct 1996 GAATGTAGACCTCGCAAAGTGATAAGTTATTTAGAGGGAGAAGCAGTGCGTCTATCCAGACAATTACCCATGTA 2069
Query 499 -------------------------------------------------------------------------- 498
Sbjct 2070 CTTATCAAAAGAGGACATCCAAGACATTATCTACAGAATGAAGCACCAGTTTGGAAATGAAATTAAAGAGTGTG 2143
Query 499 -------------------------------------------------- 498
Sbjct 2144 TTCATGGTCGCCCATTTTTTCATCATTTAACCTATCTTCCAGAAACTACA 2193
