Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11046
- Subject:
- XM_017001508.2
- Aligned Length:
- 2307
- Identities:
- 1065
- Gaps:
- 1242
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGACGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTGGAAAAACTC 74
Query 1 ----ATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AAGAATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCA 148
Query 71 ATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGAGGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTT 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGAGGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTT 222
Query 145 GGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAGTCTTTAAATGTACAGTCTAA 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAGTCTTTAAATGTACAGTCTAA 296
Query 219 ATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCCATTC 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCCATTC 370
Query 293 CCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTA 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTA 444
Query 367 CTCCAGCAGGCACAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAG 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTCCAGCAGGCACAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAG 518
Query 441 TGCTGCTGGAGCCACCATCTCCGCCTCTGCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGA 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCTGCTGGAGCCACCATCTCCGCCTCTGCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGA 592
Query 515 TCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAATCTCAACCTGCAACAGTTTGTGTTGGTGCAT 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAATCTCAACCTGCAACAGTTTGTGTTGGTGCAT 666
Query 589 CCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGC 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGC 740
Query 663 GCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCA 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCA 814
Query 737 CCTCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACA 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCTCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACA 888
Query 811 CCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTT 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTT 962
Query 885 CAAACAAAGACGAATCAAACTTGGATTCACTCAGGGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATG 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAAACAAAGACGAATCAAACTTGGATTCACTCAGGGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATG 1036
Query 959 ACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTGAAGCCA 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTGAAGCCA 1110
Query 1033 CTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGTGCCCTGAA 1106
|||||||||||||||||||||||||| |||||||
Sbjct 1111 CTTTTAGAGAAGTGGCTAAATGATGC--AGAACCT--------------------------------------- 1143
Query 1107 TTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCT 1180
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1181 TAGAGAAGAGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATG 1254
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1255 GAAAAAGAGGTGATTCGTGTTTGGTTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGG 1328
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1329 TGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGCCCAACTTCACTGGTGGCGACCACACCAAGCCTTG 1402
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1403 TGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGTGCTGCTGTGACGAATCTT 1476
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1477 TCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCCTC 1550
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1551 AGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTG 1624
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1625 AGACCAGCACAACACAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCA 1698
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1699 TCAGGTTTGCAAACAGCAGCAGCTGCTGCCCTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGC 1772
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1773 CATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCACAGTTTGCGGCTGGAGGTGCCTTACTCA 1846
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1847 GTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTGGCAACTATTCAA 1920
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1921 GCTCTTGCTTCTGGTGGCTCTCTTCCAATAACATCACTTGATGCAACTGGGAACCTGGTATTTGCCAATGCGGG 1994
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 1995 AGGAGCCCCCAACATCGTGACTGCCCCTCTGTTCCTGAACCCTCAGAACCTCTCTCTGCTCACCAGCAACCCTG 2068
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 2069 TTAGCTTGGTCTCTGCCGCCGCAGCATCTGCAGGGAACTCTGCACCTGTAGCCAGCCTTCACGCCACCTCCACC 2142
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 2143 TCTGCTGAGTCCATCCAGAACTCTCTCTTCACAGTGGCCTCTGCCAGCGGGGCTGCGTCCACCACCACCACCGC 2216
Sbjct 1144 -------------------------------------------------------------------------- 1143
Query 2217 CTCCAAGGCACAG 2229
Sbjct 1144 ------------- 1143
