Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11047
- Subject:
- NM_001163554.1
- Aligned Length:
- 1749
- Identities:
- 1133
- Gaps:
- 549
Alignment
Query 1 ATGGTTCACTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA 74
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1 ATGGTTCATTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGA 74
Query 75 CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT 148
||||||.||||||||||||||||||||||||||||||||.||||.|||.||||||||||||||.|||||..|.|
Sbjct 75 CTCCCCGTCAGAGCACACAGACACCGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAATAAAGCGT 148
Query 149 CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAAAGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCA 222
||||||||||.||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCA 222
Query 223 GCAGCACCCCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCT 296
||||||||||.||||||.||||||||.||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 223 GCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGCTGACGGGCAGCCAGCT 296
Query 297 AGCTGGGGACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTG 370
||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||||||||||||||||||
Sbjct 297 AGCTGGGGACATACAGCAACTCCTCCAGCTCCAGCAGCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTG 370
Query 371 CTCAGTTCCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCT 444
|||||||||||||.||.|||||.||||||||.|||||||||||||||||.||.|||||||||||||||||||||
Sbjct 371 CTCAGTTCCTGCTGCCACAGGCACAGCAGAGTCAGCCAGGCCTGCTACCAACGCCAAATCTATTCCAGCTACCT 444
Query 445 CAGCAAACCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACACAGCCCCCCAAATGCTTGGA 518
||.|||||||||||||||||.||||||||||||||||||||.||||||||.|||||||||||.|||||||||||
Sbjct 445 CAACAAACCCAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCCCCCGAAATGCTTGGA 518
Query 519 GCCACCATCCCACCCCGAGGAGCCCAGTGATCTGGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCC 592
|||.||.||||||||.|||||||||||.|||||||||||||||||.||.||.||.|||||||||||||||||||
Sbjct 519 GCCGCCCTCCCACCCGGAGGAGCCCAGCGATCTGGAGGAGCTGGAACAGTTTGCTCGCACCTTCAAGCAACGCC 592
Query 593 GCATCAAGCTGGGCTTCACGCAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAG 666
|||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.
Sbjct 593 GCATCAAGCTGGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAA 666
Query 667 ACGACCATTTCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAA 740
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 667 ACGACCATTTCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAA 740
Query 741 GTGGCTCAACGATGCAGAGACTATGTCTGTGGACTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCC 814
||||||||||||.||||||||||||||||||||.||||||||.||||||||.||||||||||||||||||||||
Sbjct 741 GTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCCCAGCC 814
Query 815 TGGGTTTCGACGGCCTGCCCGGCCGGAGACGCAAGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTA 888
|||||||||||||.|||||.||.||||||||||||||||||||||||||||||||.||.|||||||||||||||
Sbjct 815 TGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTA 888
Query 889 GAGAAGAGTTTTCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGA 962
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 889 GAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCAGAGCAGCTGCACATGGA 962
Query 963 GAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 963 GAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCC 1036
Query 1037 CCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCTACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACC 1110
||||||||||||||||.||.||||||.|||||||||||||.||..||||||||||||||||||||||.||||||
Sbjct 1037 CCATGCTGCCCAGCCCGGGAAAGCCGACCAGCTACAGCCCTCACCTGGTCACACCCCAAGGGGGCGCAGGGACC 1110
Query 1111 TTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGCA---------------------------------------- 1144
|||||.||||||||||||||.|||||||||||||
Sbjct 1111 TTACCATTGTCCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCA 1184
Query 1145 -------------------------------------------------------------------------- 1144
Sbjct 1185 TCCCAGCCGGACAGCAGGAGGGGGTGGGGGTGGGGGCGGAGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCA 1258
Query 1145 ----------------------CAACAGCACAAACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCA 1196
|||||||||||||||.||||||||||||||||||||||||||.||||||||.
Sbjct 1259 CTCCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCACTCGGCTATTGGCTTGTCG 1332
Query 1197 GGCC---------------------------------------------------------------------- 1200
||||
Sbjct 1333 GGCCTGAACCCCAGCGCGGGAAGCACAATGGTGGGGTTGAGCTCTGGGCTGAGTCCAGCCCTCATGAGCAACAA 1406
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1407 CCCTTTGGCCACTATCCAAGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAACC 1480
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1481 TGGTGCTGGGGGCAGCCGGTGCGGCCCCAGGGAGTCCCAGCTTAGTAACCTCGCCTCTCTTCTTGAACCACACC 1554
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1555 GGTCTGCCGCTGCTCAGTGCCCCACCAGGCGTGGGCCTGGTCTCAGCGGCGGCTGCAGCCGTAGCAGCATCCAT 1628
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1629 CTCCAGCAAGTCTCCTGGCCTCTCCTCGTCTTCTTCATCCTCATCATCCTCCACGTGCAGTGATGTGGCAGCAC 1702
Query 1201 ----------------------------------------------- 1200
Sbjct 1703 AGACCCCTGGAGGCCCCGGAGGACCCGAGGCGGGGTCCAAGGCTGAG 1749
