Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11047
- Subject:
- XM_006539653.3
- Aligned Length:
- 1879
- Identities:
- 1124
- Gaps:
- 686
Alignment
Query 1 ATGGTTCACTC-----CAGC-----------ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCG 58
|||| | |||| |||||.||..| |||||||||||||||||||||||||||||||
Sbjct 1 ATGG------CGAAGACAGCGGCGCCTACCGATGGGAGCAGC-GAAATAAGAATGTCTAAGCCCCTGGAGGCCG 67
Query 59 AGAAGCAAGGTCTGGACTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAAC 132
||||||||.|||||||||||||.||||||||||||||||||||||||||||||||.||||.|||.|||||||||
Sbjct 68 AGAAGCAAAGTCTGGACTCCCCGTCAGAGCACACAGACACCGAAAGAAATGGACCCGACATTAACCATCAGAAC 141
Query 133 CCCCAAAATAAGACCTCCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAA---------------------- 184
|||||.|||||..|.|||||||||||.||||||||||||||||||||.||.|
Sbjct 142 CCCCAGAATAAAGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGTGGGCATTCTCTCTGGCCT 215
Query 185 --------------------------------------------AGATCAAGGCTGAAGACCCCAGTGGCGATT 214
||||||||||||||||||||||||||||||
Sbjct 216 CCACTTAACATTCTGGGGTCCCGGACCCTGCCTCTCTCCTCCCCAGATCAAGGCTGAAGACCCCAGTGGCGATT 289
Query 215 CAGCCCCAGCAGCACCCCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGC 288
||||||||||||||||||.||||||.||||||||.||||||||||||||||||||||||||||||.||||||||
Sbjct 290 CAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGCTGACGGGC 363
Query 289 AGCCAGCTAGCTGGGGACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCA 362
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||||||||||
Sbjct 364 AGCCAGCTAGCTGGGGACATACAGCAACTCCTCCAGCTCCAGCAGCTGGTGCTTGTCCCCGGCCACCACCTCCA 437
Query 363 GCCACCTGCTCAGTTCCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCC 436
|||||||||||||||||||||.||.|||||.||||||||.|||||||||||||||||.||.|||||||||||||
Sbjct 438 GCCACCTGCTCAGTTCCTGCTGCCACAGGCACAGCAGAGTCAGCCAGGCCTGCTACCAACGCCAAATCTATTCC 511
Query 437 AGCTACCTCAGCAAACCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACA------------ 498
||||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||.|||
Sbjct 512 AGCTACCTCAACAAACCCAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGGCTATGACT 585
Query 499 ------------------------------------CAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGA 536
||||||||.||||||||||||||.||.||||||||.||
Sbjct 586 CGCCCCACGCTGCCCGACCCACACCTCTCACACCCGCAGCCCCCGAAATGCTTGGAGCCGCCCTCCCACCCGGA 659
Query 537 GGAGCCCAGTGATCTGGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCA 610
|||||||||.|||||||||||||||||.||.||.||.|||||||||||||||||||||||||||||||||||||
Sbjct 660 GGAGCCCAGCGATCTGGAGGAGCTGGAACAGTTTGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCA 733
Query 611 CGCAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTC 684
|.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||
Sbjct 734 CACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCATTTCCCGCTTC 807
Query 685 GAGGCCCTCAACCTGAGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGA 758
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||
Sbjct 808 GAGGCCCTCAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGA 881
Query 759 GACTATGTCTGTGGACTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGC 832
|||||||||||||||.||||||||.||||||||.|||||||||||||||||||||||||||||||||||.||||
Sbjct 882 GACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGC 955
Query 833 CCGGCCGGAGACGCAAGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCG 906
|.||.||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.||||||
Sbjct 956 CGGGGCGGAGACGCAAGAAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCG 1029
Query 907 AACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGT 980
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1030 AACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCAGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGT 1103
Query 981 CTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAG 1054
||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|
Sbjct 1104 CTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGG 1177
Query 1055 GGAAGCCGGCCAGCTACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCT 1128
|.||||||.|||||||||||||.||..||||||||||||||||||||||.|||||||||||.||||||||||||
Sbjct 1178 GAAAGCCGACCAGCTACAGCCCTCACCTGGTCACACCCCAAGGGGGCGCAGGGACCTTACCATTGTCCCAAGCT 1251
Query 1129 TCCAGCAGTCTGAGCA---------------------------------------------------------- 1144
||.|||||||||||||
Sbjct 1252 TCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCATCCCAGCCGGACAGCAGG 1325
Query 1145 -------------------------------------------------------------------------- 1144
Sbjct 1326 AGGGGGTGGGGGTGGGGGCGGAGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCA 1399
Query 1145 ----CAACAGCACAAACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCC-------------- 1200
|||||||||||||||.||||||||||||||||||||||||||.||||||||.||||
Sbjct 1400 CCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCACTCGGCTATTGGCTTGTCGGGCCTGAACCCCAGCGCG 1473
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1474 GGAAGCACAATGGTGGGGTTGAGCTCTGGGCTGAGTCCAGCCCTCATGAGCAACAACCCTTTGGCCACTATCCA 1547
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1548 AGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAACCTGGTGCTGGGGGCAGCCG 1621
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1622 GTGCGGCCCCAGGGAGTCCCAGCTTAGTAACCTCGCCTCTCTTCTTGAACCACACCGGTCTGCCGCTGCTCAGT 1695
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1696 GCCCCACCAGGCGTGGGCCTGGTCTCAGCGGCGGCTGCAGCCGTAGCAGCATCCATCTCCAGCAAGTCTCCTGG 1769
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1770 CCTCTCCTCGTCTTCTTCATCCTCATCATCCTCCACGTGCAGTGATGTGGCAGCACAGACCCCTGGAGGCCCCG 1843
Query 1201 ----------------------------- 1200
Sbjct 1844 GAGGACCCGAGGCGGGGTCCAAGGCTGAG 1872
