Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11047
Subject:
XM_006539653.3
Aligned Length:
1879
Identities:
1124
Gaps:
686

Alignment

Query    1  ATGGTTCACTC-----CAGC-----------ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCG  58
            ||||      |     ||||           |||||.||..| |||||||||||||||||||||||||||||||
Sbjct    1  ATGG------CGAAGACAGCGGCGCCTACCGATGGGAGCAGC-GAAATAAGAATGTCTAAGCCCCTGGAGGCCG  67

Query   59  AGAAGCAAGGTCTGGACTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAAC  132
            ||||||||.|||||||||||||.||||||||||||||||||||||||||||||||.||||.|||.|||||||||
Sbjct   68  AGAAGCAAAGTCTGGACTCCCCGTCAGAGCACACAGACACCGAAAGAAATGGACCCGACATTAACCATCAGAAC  141

Query  133  CCCCAAAATAAGACCTCCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAA----------------------  184
            |||||.|||||..|.|||||||||||.||||||||||||||||||||.||.|                      
Sbjct  142  CCCCAGAATAAAGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGTGGGCATTCTCTCTGGCCT  215

Query  185  --------------------------------------------AGATCAAGGCTGAAGACCCCAGTGGCGATT  214
                                                        ||||||||||||||||||||||||||||||
Sbjct  216  CCACTTAACATTCTGGGGTCCCGGACCCTGCCTCTCTCCTCCCCAGATCAAGGCTGAAGACCCCAGTGGCGATT  289

Query  215  CAGCCCCAGCAGCACCCCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGC  288
            ||||||||||||||||||.||||||.||||||||.||||||||||||||||||||||||||||||.||||||||
Sbjct  290  CAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGCTGACGGGC  363

Query  289  AGCCAGCTAGCTGGGGACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCA  362
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||||||||||
Sbjct  364  AGCCAGCTAGCTGGGGACATACAGCAACTCCTCCAGCTCCAGCAGCTGGTGCTTGTCCCCGGCCACCACCTCCA  437

Query  363  GCCACCTGCTCAGTTCCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCC  436
            |||||||||||||||||||||.||.|||||.||||||||.|||||||||||||||||.||.|||||||||||||
Sbjct  438  GCCACCTGCTCAGTTCCTGCTGCCACAGGCACAGCAGAGTCAGCCAGGCCTGCTACCAACGCCAAATCTATTCC  511

Query  437  AGCTACCTCAGCAAACCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACA------------  498
            ||||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||.|||            
Sbjct  512  AGCTACCTCAACAAACCCAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGGCTATGACT  585

Query  499  ------------------------------------CAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGA  536
                                                ||||||||.||||||||||||||.||.||||||||.||
Sbjct  586  CGCCCCACGCTGCCCGACCCACACCTCTCACACCCGCAGCCCCCGAAATGCTTGGAGCCGCCCTCCCACCCGGA  659

Query  537  GGAGCCCAGTGATCTGGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCA  610
            |||||||||.|||||||||||||||||.||.||.||.|||||||||||||||||||||||||||||||||||||
Sbjct  660  GGAGCCCAGCGATCTGGAGGAGCTGGAACAGTTTGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCA  733

Query  611  CGCAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTC  684
            |.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||
Sbjct  734  CACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCATTTCCCGCTTC  807

Query  685  GAGGCCCTCAACCTGAGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGA  758
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||
Sbjct  808  GAGGCCCTCAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGA  881

Query  759  GACTATGTCTGTGGACTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGC  832
            |||||||||||||||.||||||||.||||||||.|||||||||||||||||||||||||||||||||||.||||
Sbjct  882  GACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGC  955

Query  833  CCGGCCGGAGACGCAAGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCG  906
            |.||.||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.||||||
Sbjct  956  CGGGGCGGAGACGCAAGAAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCG  1029

Query  907  AACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGT  980
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1030  AACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCAGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGT  1103

Query  981  CTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAG  1054
            ||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|
Sbjct 1104  CTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGG  1177

Query 1055  GGAAGCCGGCCAGCTACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCT  1128
            |.||||||.|||||||||||||.||..||||||||||||||||||||||.|||||||||||.||||||||||||
Sbjct 1178  GAAAGCCGACCAGCTACAGCCCTCACCTGGTCACACCCCAAGGGGGCGCAGGGACCTTACCATTGTCCCAAGCT  1251

Query 1129  TCCAGCAGTCTGAGCA----------------------------------------------------------  1144
            ||.|||||||||||||                                                          
Sbjct 1252  TCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCATCCCAGCCGGACAGCAGG  1325

Query 1145  --------------------------------------------------------------------------  1144
                                                                                      
Sbjct 1326  AGGGGGTGGGGGTGGGGGCGGAGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCA  1399

Query 1145  ----CAACAGCACAAACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCC--------------  1200
                |||||||||||||||.||||||||||||||||||||||||||.||||||||.||||              
Sbjct 1400  CCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCACTCGGCTATTGGCTTGTCGGGCCTGAACCCCAGCGCG  1473

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1474  GGAAGCACAATGGTGGGGTTGAGCTCTGGGCTGAGTCCAGCCCTCATGAGCAACAACCCTTTGGCCACTATCCA  1547

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1548  AGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAACCTGGTGCTGGGGGCAGCCG  1621

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1622  GTGCGGCCCCAGGGAGTCCCAGCTTAGTAACCTCGCCTCTCTTCTTGAACCACACCGGTCTGCCGCTGCTCAGT  1695

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1696  GCCCCACCAGGCGTGGGCCTGGTCTCAGCGGCGGCTGCAGCCGTAGCAGCATCCATCTCCAGCAAGTCTCCTGG  1769

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1770  CCTCTCCTCGTCTTCTTCATCCTCATCATCCTCCACGTGCAGTGATGTGGCAGCACAGACCCCTGGAGGCCCCG  1843

Query 1201  -----------------------------  1200
                                         
Sbjct 1844  GAGGACCCGAGGCGGGGTCCAAGGCTGAG  1872

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