Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11047
- Subject:
- XM_006539656.3
- Aligned Length:
- 1765
- Identities:
- 1124
- Gaps:
- 572
Alignment
Query 1 ATGGTTCACTC-----CAGC-----------ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCG 58
|||| | |||| |||||.||..| |||||||||||||||||||||||||||||||
Sbjct 1 ATGG------CGAAGACAGCGGCGCCTACCGATGGGAGCAGC-GAAATAAGAATGTCTAAGCCCCTGGAGGCCG 67
Query 59 AGAAGCAAGGTCTGGACTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAAC 132
||||||||.|||||||||||||.||||||||||||||||||||||||||||||||.||||.|||.|||||||||
Sbjct 68 AGAAGCAAAGTCTGGACTCCCCGTCAGAGCACACAGACACCGAAAGAAATGGACCCGACATTAACCATCAGAAC 141
Query 133 CCCCAAAATAAGACCTCCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAAAGATCAAGGCTGAAGACCCCAG 206
|||||.|||||..|.|||||||||||.||||||||||||||||||||.||.|||||||||||||||||||||||
Sbjct 142 CCCCAGAATAAAGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGATCAAGGCTGAAGACCCCAG 215
Query 207 TGGCGATTCAGCCCCAGCAGCACCCCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGT 280
||||||||||||||||||||||||||.||||||.||||||||.||||||||||||||||||||||||||||||.
Sbjct 216 TGGCGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGC 289
Query 281 TGACGGGCAGCCAGCTAGCTGGGGACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCAC 354
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||
Sbjct 290 TGACGGGCAGCCAGCTAGCTGGGGACATACAGCAACTCCTCCAGCTCCAGCAGCTGGTGCTTGTCCCCGGCCAC 363
Query 355 CACCTCCAGCCACCTGCTCAGTTCCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAA 428
|||||||||||||||||||||||||||||.||.|||||.||||||||.|||||||||||||||||.||.|||||
Sbjct 364 CACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAGGCACAGCAGAGTCAGCCAGGCCTGCTACCAACGCCAAA 437
Query 429 TCTATTCCAGCTACCTCAGCAAACCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACACAGC 502
||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||.|||||||
Sbjct 438 TCTATTCCAGCTACCTCAACAAACCCAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGC 511
Query 503 CCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAGTGATCTGGAGGAGCTGGAGCAATTCGCCCGC 576
||||.||||||||||||||.||.||||||||.|||||||||||.|||||||||||||||||.||.||.||.|||
Sbjct 512 CCCCGAAATGCTTGGAGCCGCCCTCCCACCCGGAGGAGCCCAGCGATCTGGAGGAGCTGGAACAGTTTGCTCGC 585
Query 577 ACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTACGG 650
|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||
Sbjct 586 ACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGG 659
Query 651 CAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGCAAACTCA 724
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 660 CAACGACTTCAGCCAAACGACCATTTCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGTAAACTCA 733
Query 725 AGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTCTGTGGACTCAAGCCTGCCCAGCCCCAACCAG 798
||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||.||||||||.||||||
Sbjct 734 AGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAG 807
Query 799 CTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGAGACGCAAGAAGAGGACCAGCATCGAGACAAA 872
|||||||||||||||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||.||
Sbjct 808 CTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCGAGACGAA 881
Query 873 CGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCCG 946
.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 882 TGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCAG 955
Query 947 AGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAAC 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 956 AGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAAC 1029
Query 1021 CCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCTACAGCCCCCATATGGTCACACCCCA 1094
||.|||||||||||||||||||||||||||||.||.||||||.|||||||||||||.||..|||||||||||||
Sbjct 1030 CCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAAAGCCGACCAGCTACAGCCCTCACCTGGTCACACCCCA 1103
Query 1095 AGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGCA------------------------ 1144
|||||||||.|||||||||||.||||||||||||||.|||||||||||||
Sbjct 1104 AGGGGGCGCAGGGACCTTACCATTGTCCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAG 1177
Query 1145 -------------------------------------------------------------------------- 1144
Sbjct 1178 CTGTGGGGACGCTCCATCCCAGCCGGACAGCAGGAGGGGGTGGGGGTGGGGGCGGAGCTGCGCCCCCCCTCAAT 1251
Query 1145 --------------------------------------CAACAGCACAAACCCCAGCCCTCAAGGCAGCCACTC 1180
|||||||||||||||.||||||||||||||||||||
Sbjct 1252 TCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCACTC 1325
Query 1181 GGCTATCGGCTTGTCAGGCC------------------------------------------------------ 1200
||||||.||||||||.||||
Sbjct 1326 GGCTATTGGCTTGTCGGGCCTGAACCCCAGCGCGGGAAGCACAATGGTGGGGTTGAGCTCTGGGCTGAGTCCAG 1399
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1400 CCCTCATGAGCAACAACCCTTTGGCCACTATCCAAGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTT 1473
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1474 GATGGCAGCGGGAACCTGGTGCTGGGGGCAGCCGGTGCGGCCCCAGGGAGTCCCAGCTTAGTAACCTCGCCTCT 1547
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1548 CTTCTTGAACCACACCGGTCTGCCGCTGCTCAGTGCCCCACCAGGCGTGGGCCTGGTCTCAGCGGCGGCTGCAG 1621
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1622 CCGTAGCAGCATCCATCTCCAGCAAGTCTCCTGGCCTCTCCTCGTCTTCTTCATCCTCATCATCCTCCACGTGC 1695
Query 1201 --------------------------------------------------------------- 1200
Sbjct 1696 AGTGATGTGGCAGCACAGACCCCTGGAGGCCCCGGAGGACCCGAGGCGGGGTCCAAGGCTGAG 1758
