Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11047
- Subject:
- XM_011250457.2
- Aligned Length:
- 2142
- Identities:
- 1098
- Gaps:
- 978
Alignment
Query 1 ATGGTTCACTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA 74
||||||||||||||||||||||||||||||.|||||||
Sbjct 1 ------------------------------------ATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGA 38
Query 75 CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT 148
||||||.||||||||||||||||||||||||||||||||.||||.|||.||||||||||||||.|||||..|.|
Sbjct 39 CTCCCCGTCAGAGCACACAGACACCGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAATAAAGCGT 112
Query 149 CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAA-------------------------------------- 184
||||||||||.||||||||||||||||||||.||.|
Sbjct 113 CCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGTGGGCATTCTCTCTGGCCTCCACTTAACATTCTGG 186
Query 185 ----------------------------AGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCAGCAGCACC 230
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 GGTCCCGGACCCTGCCTCTCTCCTCCCCAGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCAGCAGCACC 260
Query 231 CCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCTAGCTGG-- 302
||.||||||.||||||||.||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 261 CCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGCTGACGGGCAGCCAGCTAGCTGGGC 334
Query 303 -------------------------------------------------------------------------- 302
Sbjct 335 TCTCAGCACTGATACCTGCTCAGCAGCAACTCCTCCTTCAGCAAGCTCAGGCCCAGCTGCTGGCCGCTGCCGTC 408
Query 303 -------------------------------------------------------------------------- 302
Sbjct 409 CAGCAGTCCAGCGCCGCTGCCGCCAACGCTGCTGCTGCCGCCGCTGCCGCCTCCACCTCCTCCTCCACCTCTTC 482
Query 303 -------------------------------------------------------------------------- 302
Sbjct 483 CGCCTCCTCCTCCACCTCGCAGACCCCAGCCTCCTCTGGGGGAGGCGACCTGCCACCATCACAGCCTACCAGCC 556
Query 303 -------------------------------------------------------GGACATACAGCAGCTCCTC 321
||||||||||||.||||||
Sbjct 557 AGCCCCCAGGGACCCCACAGCTCACCTTGTCCCAACCCATCCAGCTCACAGCACAGGACATACAGCAACTCCTC 630
Query 322 CAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTACCGCAGGCCCA 395
|||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||.||.|||||.||
Sbjct 631 CAGCTCCAGCAGCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAGGCACA 704
Query 396 GCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACCTCAGCAAACCCAGGGAGCTCTTCTGA 469
||||||.|||||||||||||||||.||.|||||||||||||||||||||||.|||||||||||||||||.||||
Sbjct 705 GCAGAGTCAGCCAGGCCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAACAAACCCAGGGAGCTCTCCTGA 778
Query 470 CCTCCCAGCCCCGGGCCGGGCTTCCCACA--------------------------------------------- 498
||||||||||||||||.||||||||.|||
Sbjct 779 CCTCCCAGCCCCGGGCTGGGCTTCCTACACAGGCTATGACTCGCCCCACGCTGCCCGACCCACACCTCTCACAC 852
Query 499 ---CAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCCAGTGATCTGGAGGAGCTGGAGCAATT 569
||||||||.||||||||||||||.||.||||||||.|||||||||||.|||||||||||||||||.||.||
Sbjct 853 CCGCAGCCCCCGAAATGCTTGGAGCCGCCCTCCCACCCGGAGGAGCCCAGCGATCTGGAGGAGCTGGAACAGTT 926
Query 570 CGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGATGTGGGCCTGGCCATGGGCAAGC 643
.||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 927 TGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGC 1000
Query 644 TCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGC 717
||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1001 TCTATGGCAACGACTTCAGCCAAACGACCATTTCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGT 1074
Query 718 AAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATGTCTGTGGACTCAAGCCTGCCCAGCCC 791
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||.||||||||
Sbjct 1075 AAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCC 1148
Query 792 CAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCGGAGACGCAAGAAGAGGACCAGCATCG 865
.|||||||||||||||||||||||||||||||||||.|||||.||.||||||||||||||||||||||||||||
Sbjct 1149 AAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCG 1222
Query 866 AGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTG 939
||||.||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1223 AGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTG 1296
Query 940 ATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACG 1013
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1297 ATCGCAGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACG 1370
Query 1014 CATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCCGGCCAGCTACAGCCCCCATATGGTCA 1087
|||||||||.|||||||||||||||||||||||||||||.||.||||||.|||||||||||||.||..||||||
Sbjct 1371 CATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAAAGCCGACCAGCTACAGCCCTCACCTGGTCA 1444
Query 1088 CACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCAGTCTGAGCA----------------- 1144
||||||||||||||||.|||||||||||.||||||||||||||.|||||||||||||
Sbjct 1445 CACCCCAAGGGGGCGCAGGGACCTTACCATTGTCCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTA 1518
Query 1145 -------------------------------------------------------------------------- 1144
Sbjct 1519 TCCTCAGCTGTGGGGACGCTCCATCCCAGCCGGACAGCAGGAGGGGGTGGGGGTGGGGGCGGAGCTGCGCCCCC 1592
Query 1145 ---------------------------------------------CAACAGCACAAACCCCAGCCCTCAAGGCA 1173
|||||||||||||||.|||||||||||||
Sbjct 1593 CCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCA 1666
Query 1174 GCCACTCGGCTATCGGCTTGTCAGGCC----------------------------------------------- 1200
|||||||||||||.||||||||.||||
Sbjct 1667 GCCACTCGGCTATTGGCTTGTCGGGCCTGAACCCCAGCGCGGGAAGCACAATGGTGGGGTTGAGCTCTGGGCTG 1740
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1741 AGTCCAGCCCTCATGAGCAACAACCCTTTGGCCACTATCCAAGCCCTGGCCTCTGGTGGAACCCTGCCCCTTAC 1814
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1815 CAGCCTTGATGGCAGCGGGAACCTGGTGCTGGGGGCAGCCGGTGCGGCCCCAGGGAGTCCCAGCTTAGTAACCT 1888
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1889 CGCCTCTCTTCTTGAACCACACCGGTCTGCCGCTGCTCAGTGCCCCACCAGGCGTGGGCCTGGTCTCAGCGGCG 1962
Query 1201 -------------------------------------------------------------------------- 1200
Sbjct 1963 GCTGCAGCCGTAGCAGCATCCATCTCCAGCAAGTCTCCTGGCCTCTCCTCGTCTTCTTCATCCTCATCATCCTC 2036
Query 1201 ---------------------------------------------------------------------- 1200
Sbjct 2037 CACGTGCAGTGATGTGGCAGCACAGACCCCTGGAGGCCCCGGAGGACCCGAGGCGGGGTCCAAGGCTGAG 2106
