Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11047
• Subject: XM_024451546.1
• Aligned Length: 2103
• Identities: 1164
• Gaps: 939

Alignment

Query    1  ATGGTTCACTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA  74
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct    1  ------------------------------------ATGTCTAAGCCCCTGGAGGCCGAGAAGCAAGGTCTGGA  38

Query   75  CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   39  CTCCCCATCAGAGCACACAGACACCGAAAGAAATGGACCAGACACTAATCATCAGAACCCCCAAAATAAGACCT  112

Query  149  CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAAAGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  113  CCCCATTCTCCGTGTCCCCAACTGGCCCCAGTACAAAGATCAAGGCTGAAGACCCCAGTGGCGATTCAGCCCCA  186

Query  223  GCAGCACCCCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  187  GCAGCACCCCTGCCCCCTCAGCCGGCCCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCT  260

Query  297  AGCTGG--------------------------------------------------------------------  302
            ||||||                                                                    
Sbjct  261  AGCTGGGCTCACGGCACTGATGCCAGCTCAGCAGCAGCTCCTCCTGCAGCAAGCCCAGGCCCAGCTCCTGGCCG  334

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct  335  CCGCCGTGCAGCAGTCCAGTGCCGCCGCTGCCGCTAACGCCGCTGCCGCCGCCGCCGCCGCCTCCGCCTCCTCC  408

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct  409  TCTACTTCCTCCTCCTCCTCCTCCTCTGCCTCCTCCTCGACCTCACAGCCCCCAGCCTCCTCTGGGGGGGGTGA  482

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct  483  CCTGCCACCACCACAGCCTGCCAGCCAGCCCCCTGGGACCCCACAGCTCACCTTGTCCCAACCCATCCAGCTCA  556

Query  303  -------GGACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCT  369
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  557  CAGCACAGGACATACAGCAGCTCCTCCAGCTCCAGCAGCTGGTGCTTGTGCCAGGCCACCACCTCCAGCCACCT  630

Query  370  GCTCAGTTCCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACC  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  631  GCTCAGTTCCTGCTACCGCAGGCCCAGCAGAGCCAGCCAGGCCTGCTACCGACACCAAATCTATTCCAGCTACC  704

Query  444  TCAGCAAACCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACA-------------------  498
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||                   
Sbjct  705  TCAGCAAACCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCCGGGCTTCCCACACAGGCCGTGACCCGCCCTA  778

Query  499  -----------------------------CAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCC  543
                                         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  779  CGCTGCCCGACCCGCACCTCTCGCACCCGCAGCCCCCCAAATGCTTGGAGCCACCATCCCACCCCGAGGAGCCC  852

Query  544  AGTGATCTGGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGG  617
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  853  AGTGATCTGGAGGAGCTGGAGCAATTCGCCCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGG  926

Query  618  TGATGTGGGCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCC  691
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  927  TGATGTGGGCCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATTTCCCGCTTCGAGGCCC  1000

Query  692  TCAACCTGAGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATG  765
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1001  TCAACCTGAGCTTCAAGAACATGTGCAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGATGCAGAGACTATG  1074

Query  766  TCTGTGGACTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCG  839
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1075  TCTGTGGACTCAAGCCTGCCCAGCCCCAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGCCTGCCCGGCCG  1148

Query  840  GAGACGCAAGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGA  913
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149  GAGACGCAAGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGA  1222

Query  914  AGCCTACCTCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTC  987
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1223  AGCCTACCTCAGAGGAGATCCTGCTGATCGCCGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTC  1296

Query  988  TGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCC  1061
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1297  TGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCCTGCAGTGCGGCCCCCATGCTGCCCAGCCCAGGGAAGCC  1370

Query 1062  GGCCAGCTACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCA  1135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1371  GGCCAGCTACAGCCCCCATATGGTCACACCCCAAGGGGGCGCGGGGACCTTACCGTTGTCCCAAGCTTCCAGCA  1444

Query 1136  GTCTGAGCA-----------------------------------------------------------------  1144
            |||||||||                                                                 
Sbjct 1445  GTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACGCTCCACCCCAGCCGGACAGCTGGAGGGGGT  1518

Query 1145  -----------------------------------------------------------------------CAA  1147
                                                                                   |||
Sbjct 1519  GGGGGCGGGGGCGGGGCTGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAA  1592

Query 1148  CAGCACAAACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCC---------------------  1200
            |||||||||||||||||||||||||||||||||||||||||||||||||||||                     
Sbjct 1593  CAGCACAAACCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCAGGCCTGAACCCCAGCACGGGAAGCA  1666

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1667  CAATGGTGGGGTTGAGCTCCGGGCTGAGTCCAGCCCTCATGAGCAACAACCCTTTGGCCACTATCCAAGCCCTG  1740

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1741  GCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATGGCAGCGGGAATCTGGTGCTGGGGGCAGCCGGTGCAGC  1814

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1815  CCCGGGGAGCCCTGGCCTGGTGACCTCGCCGCTCTTCTTGAATCATGCTGGGCTGCCCCTGCTCAGCACCCCGC  1888

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1889  CTGGTGTGGGCCTGGTCTCAGCAGCGGCTGCGGCTGTGGCAGCCTCCATCTCCAGCAAGTCTCCTGGCCTCTCC  1962

Query 1201  --------------------------------------------------------------------------  1200
                                                                                      
Sbjct 1963  TCCTCATCCTCTTCATCCTCATCCTCCTCCTCCTCCACTTGCAGCGAGACGGCAGCACAGACCCCTGGAGGTCC  2036

Query 1201  -------------------------------  1200
                                           
Sbjct 2037  AGGGGGGCCCGAGGCAGGGTCCAAACCTGAG  2067