Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11069
- Subject:
- NR_028293.2
- Aligned Length:
- 2022
- Identities:
- 1214
- Gaps:
- 770
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCTCGCCACCAGAGGTTTCCCAGAGAGGAAGGCGTGGCTCCCTCCCGGGCCAGTGAGCCCTGGCGCCGCCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGCGGTCCCAGCAGCGGAGTAGGGCGGCGGCTGCGCCCCGCACCATGGGGGGCAGCCCAGCCCCAGCCGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAAACGCCGACCTCCGCCGCCGCCCGCGCCGCGTCTGCCCCCTCCCGCTGCGGCTCTCTGGACGCCATCCCCTC 222
Query 1 -----------------ATGAAGGAGACCCGGGGCTACGGAGGGGATGCCCCCTTCTGCACCCGCCTCAACCAC 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTCACCTCGAAGCCAACATGAAGGAGACCCGGGGCTACGGAGGGGATGCCCCCTTCTGCACCCGCCTCAACCAC 296
Query 58 TCCTACACAGGCATGTGGGCGCCCGAGCGTTCCGCCGAGGCGCGGGGCAACCTCACGCGCCCTCCAGGGTCTGG 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCCTACACAGGCATGTGGGCGCCCGAGCGTTCCGCCGAGGCGCGGGGCAACCTCACGCGCCCTCCAGGGTCTGG 370
Query 132 CGAGGATTGCGGATCGGTGTCCGTGGCCTTCCCGATCACCATGCTGCTCACTGGTTTCGTGGGCAACGCACTGG 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CGAGGATTGCGGATCGGTGTCCGTGGCCTTCCCGATCACCATGCTGCTCACTGGTTTCGTGGGCAACGCACTGG 444
Query 206 CCATGCTGCTCGTGTCGCGCAGCTACCGGCGCCGGGAGAGCAAGCGCAAGAAGTCCTTCCTGCTGTGCATCGGC 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCATGCTGCTCGTGTCGCGCAGCTACCGGCGCCGGGAGAGCAAGCGCAAGAAGTCCTTCCTGCTGTGCATCGGC 518
Query 280 TGGCTGGCGCTCACCGACCTGGTCGGGCAGCTTCTCACCACCCCGGTCGTCATCGTCGTGTACCTGTCCAAGCA 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGGCTGGCGCTCACCGACCTGGTCGGGCAGCTTCTCACCACCCCGGTCGTCATCGTCGTGTACCTGTCCAAGCA 592
Query 354 GCGTTGGGAGCACATCGACCCGTCGGGGCGGCTCTGCACCTTTTTCGGGCTGACCATGACTGTTTTCGGGCTCT 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCGTTGGGAGCACATCGACCCGTCGGGGCGGCTCTGCACCTTTTTCGGGCTGACCATGACTGTTTTCGGGCTCT 666
Query 428 CCTCGTTGTTCATCGCCAGCGCCATGGCCGTCGAGCGGGCGCTGGCCATCAGGGCGCCGCACTGGTATGCGAGC 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCTCGTTGTTCATCGCCAGCGCCATGGCCGTCGAGCGGGCGCTGGCCATCAGGGCGCCGCACTGGTATGCGAGC 740
Query 502 CACATGAAGACGCGTGCCACCCGCGCTGTGCTGCTCGGCGTGTGGCTGGCCGTGCTCGCCTTCGCCCTGCTGCC 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CACATGAAGACGCGTGCCACCCGCGCTGTGCTGCTCGGCGTGTGGCTGGCCGTGCTCGCCTTCGCCCTGCTGCC 814
Query 576 GGTGCTGGGCGTGGGCCAGTACACCGTCCAGTGGCCCGGGACGTGGTGCTTCATCAGCACCGGGCGAGGGGGCA 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGTGCTGGGCGTGGGCCAGTACACCGTCCAGTGGCCCGGGACGTGGTGCTTCATCAGCACCGGGCGAGGGGGCA 888
Query 650 ACGGGACTAGCTCTTCGCATAACTGGGGCAACCTTTTCTTCGCCTCTGCCTTTGCCTTCCTGGGGCTCTTGGCG 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACGGGACTAGCTCTTCGCATAACTGGGGCAACCTTTTCTTCGCCTCTGCCTTTGCCTTCCTGGGGCTCTTGGCG 962
Query 724 CTGACAGTCACCTTTTCCTGCAACCTGGCCACCATTAAGGCCCTGGTGTCCCGCTGCCGGGCCAAGGCCACGGC 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTGACAGTCACCTTTTCCTGCAACCTGGCCACCATTAAGGCCCTGGTGTCCCGCTGCCGGGCCAAGGCCACGGC 1036
Query 798 ATCTCAGTCCAGTGCCCAGTGGGGCCGCATCACGACCGAGACGGCCATTCAGCTTATGGGGATCATGTGCGTGC 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCTCAGTCCAGTGCCCAGTGGGGCCGCATCACGACCGAGACGGCCATTCAGCTTATGGGGATCATGTGCGTGC 1110
Query 872 TGTCGGTCTGCTGGTCTCCGCTCCTGATAATGATGTTGAAAATGATCTTCAATCAGACATCAGTTGAGCACTGC 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGTCGGTCTGCTGGTCTCCGCTCCTGATAATGATGTTGAAAATGATCTTCAATCAGACATCAGTTGAGCACTGC 1184
Query 946 AAGACACACACGGAGAAGCAGAAAGAATGCAACTTCTTCTTAATAGCTGTTCGCCTGGCTTCACTGAACCAGAT 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAGACACACACGGAGAAGCAGAAAGAATGCAACTTCTTCTTAATAGCTGTTCGCCTGGCTTCACTGAACCAGAT 1258
Query 1020 CTTGGATCCTTGGGTTTACCTGCTGTTAAGAAAGATCCTTCTTCGAAAGTTTTGCCAGATGAGAAAAAGAAGAC 1093
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |.|..|.|
Sbjct 1259 CTTGGATCCTTGGGTTTACCTGCTGTTAAGAAAGATCCTTCTTCGAAAGTTTTGCCAG--GAG---ATGGGGCC 1327
Query 1094 TCAGAGA---------------GCAATTCTGGAGGCCGG----CA-----------AGT--TCAGGAT------ 1129
|.|..|| ||| |||||||.|| || ||| |||.|||
Sbjct 1328 TGATGGAAGGTGTTTTTGTCATGCA----TGGAGGCAGGTCCCCAGGACTTGGTGCAGTTCTCATGATAGAGAA 1397
Query 1130 -----CAGGGTGCCAGC--AGATTCGGTGTCTGATGGAGTCTTG---------CTCTCTCACCC--AGACTGGA 1185
|||.|| ||||| || ||||| |.|||| ||..||.|||| .|| ||.|
Sbjct 1398 CCCTGCAGTGT-CCAGCTAAG---------CTGAT---GACTTGAAGATAAATCTGCCTAACCCTGGGA-TGAA 1457
Query 1186 GT--------------------GCAGTGGAGTGA------------------------TTTCCGC--------- 1206
|| ||||..||| || ||||.||
Sbjct 1458 GTATCTGTGAACTATTTTGACAGCAGATGAG-GAATTTTGGGGAAATTAAAACCTGCCTTTCTGCCAGGATCAC 1530
Query 1207 -TCACTGCAACCTTCA--CCTCCTC------------------CACTCACTGCAATCTTCGCCTCCTGGGTTCA 1259
||||||.||.||.|| .|| ||| .|.||||.|.||....|.||||| ||
Sbjct 1531 ATCACTGGAAGCTCCATGACT-CTCTTTTTGTAAAAGAAAAAAAAATCACAGAAACACCCACCTCC------CA 1597
Query 1260 AGTGATTCTC-----CTGCCTCAGCCTCCCAAG----------------------------------------- 1287
|...|||||| ||.|.| |.||||||
Sbjct 1598 AACTATTCTCTTTTACTTCTT----CCCCCAAGCCCACCCCCAAATATAACTGTTATCCAGAAGCTGTTATGTC 1667
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1668 CTGTTTCCATACATGTTTTTGTACTTTTACTATATCTACATACATCAATTAAACTTATGTCCTATTGTTTTGTG 1741
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1742 AATTTATATTTGCGTATACATTATCATATGTAAAATTTGCATTTTTTTATTGAAAATTATGTTTCTTGAGATTT 1815
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1816 ATCCACATTGAAACATGGAGCTCTAAATCGTTAATTTTAACCGCTATAGAGTATTCCATAATTTGAATAAAGCA 1889
Query 1288 -------------------------------------------------------------------------- 1287
Sbjct 1890 TAATTTGTTTGTACAATCTCCCGCCAAGGGAAAATTATTTCCACACTCATCATGACAAGGAGCACTGCAAAAAT 1963
Query 1288 ------------------------ 1287
Sbjct 1964 AAAAATAAAAATTACATTCATACA 1987
