Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11131
- Subject:
- NR_033408.1
- Aligned Length:
- 2258
- Identities:
- 822
- Gaps:
- 1384
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGAGGGGGAAGCGAAGGAAGGGGAAGAGGAAGGGAAAAGCGAGCGAGAGGGGCAAGGCGGAAGAGGAAGCAGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGAAGGGAAGCCCGGGCCGCAGACGGCGAAGGAGGCAGCGGGCCGGGGGCTGAGGCGGGAGCGAGGACACGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAAGAGAGGAAGCAGAGGGAGGCGGAAGCGTGGAGGAAGGGGCGAGAGGCATCATCAAAGGAGATGAGGGGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTAGGGGCCGGGAAAGAGGCACAAGGAAGAAAGTATGGGAAGGAGGAATGGAGGGTCAGGGCTAGGCGGCGGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCGCCAGGCCGGGAAGAGTACAAGGACAAGGAGGTCAGGTTTGGGCCTACATCCCGGGGACAGGGGCGGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCGGCGGCAGCCAGGGAGGAGGAGGAGGAGGCGGCTCGGGAGTCAGCCGCCTGCCCGGCTGCGGGGCCAGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCTGGCGCCTGCCGGAAGTGCTGCTGCTGCACATGTGCTCCTACCTCGACATGCGGGCCCTCGGCCGCCTGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCAGGTGTACCGCTGGCTGTGGCACTTCACCAACTGCGACCTGCTCCGGCGCCAGATAGCCTGGGCCTCGCTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACTCCGGCTTCACGCGGCTCGGCACCAACCTGATGACCAGTGTCCCAGTGAAGGTGTCTCAGAACTGGATAGTG 666
Query 1 ---------------------------------------------ATGCCCTGGATGCAGCTAGAGGATGATTC 29
|||||||||||||||||||||||||||.|
Sbjct 667 GGGTGCTGCCGAGAGGGGATTCTGCTGAAGTGGAGATGCAGTCAGATGCCCTGGATGCAGCTAGAGGATGATGC 740
Query 30 TCTGTACATATCCCAGGCTAATTTCATCCTGGCCTACCAGTTCCGTCCAGATGGTGCCAGCTTGAATCGTCGGC 103
|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||.||
Sbjct 741 TTTGTACATATCCCAGGCTAATTTCATCCTGGCCTACCAGTTCCGTCCAGATGGTGCCAGCTTGAACCGTCAGC 814
Query 104 CTCTGGGAGTCTTTGCTGGGCATGATGAGGACGTTTGCCACTTTGTGCTGGCCAACTCGCATATTGTTAGTGCA 177
||||||||||| |||||||||||||||||||||||||||||||||||||||||.||||||||||||.||||||
Sbjct 815 CTCTGGGAGTC--TGCTGGGCATGATGAGGACGTTTGCCACTTTGTGCTGGCCACCTCGCATATTGTCAGTGCA 886
Query 178 GGAGGGGATGGGAAGATTGGCATTCATAAGATTCACAGCACCTTCACTGTCAAGTACTCGGCTCATGAACAGGA 251
|||||.|||||||||||||||.||..|||||||||||||||||||.|||.||||||||.|||||||||||||||
Sbjct 887 GGAGGAGATGGGAAGATTGGCCTTGGTAAGATTCACAGCACCTTCGCTGCCAAGTACTGGGCTCATGAACAGGA 960
Query 252 GGTGAACTGTGTGGATTGCAAAGGGGGC-----ATCATTGTGAGTGGCTCCAGGGACAGGACGGCCAAGGTGTG 320
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 961 GGTGAACTGTGTGGATTGCAAAGGGGGCATCATATCATTGTGAGTGGCTCCAGGGACAGGACGGCCAAGGTGTG 1034
Query 321 GCCTTTGGCCTCAGGCCGGCTGGGGCAGTGCTTACACACCATCCAGACTGAAGACCGAGTCTGGTCCATTGCTA 394
|||||||||||||||||.|||||||.||||.|||.|||||||||||||||||||||.|.|||||||..||||||
Sbjct 1035 GCCTTTGGCCTCAGGCCAGCTGGGGTAGTGTTTATACACCATCCAGACTGAAGACCAAATCTGGTCTGTTGCTA 1108
Query 395 TCAGCCCATTACTCAGCTCTTTTGTGACAGGGACGGCTTGTTGCGGGCACTTCTCACCCCTGAGAATCTGGGAC 468
||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||.||||||||||
Sbjct 1109 TCAGGCCATTACTCAGCTCTTTTGTGACAGGGACGGCTTGTTGTGGGCACTTCTCACCCCTGAAAATCTGGGAC 1182
Query 469 CTCAACAGTGGGCAGCTGATGACACACTTGGGCAGTGACTTTCCCCCAGGGGCTGGGGTGCTGGATGTCATGTA 542
|||||||||||||||||||||||||||||||.|||.||||||||||||.||||||||||||||||||||||.||
Sbjct 1183 CTCAACAGTGGGCAGCTGATGACACACTTGGACAGAGACTTTCCCCCAAGGGCTGGGGTGCTGGATGTCATATA 1256
Query 543 TGAGTCCCCTTTCACACTGCTGTCCTGTGGCTATGACACCTATGTTCGCTACTGGGACCTCCGCACCAGCGTCC 616
|||||||||||||.|||||||.||||||||||||||||||||||||||||||||||||..|||||||||.||||
Sbjct 1257 TGAGTCCCCTTTCGCACTGCTCTCCTGTGGCTATGACACCTATGTTCGCTACTGGGACTGCCGCACCAGTGTCC 1330
Query 617 GGAAATGTGTCATGGAGTGGGAGGAGCCCCACGACAGCACCCTGTACTGCCTGCAGACAGATGGCAACCACCTG 690
||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||
Sbjct 1331 GGAAATGTGTCATGGAGTGGGAGGAGCCCCACAACAGCACCCTGTACTGCCTGCAGACAGATGGCAACCACTTG 1404
Query 691 CTGGCCACAGGTTCCTCCTACTACGGTGTTGTACGGCCGTGGGACCGGCGTCAAAGGGCCTGCCTGCACGCCTT 764
||.||||||||||||||||.|||..|.||||||||||.|||||||||||..|||||||||||||.||||.||||
Sbjct 1405 CTTGCCACAGGTTCCTCCTTCTATAGCGTTGTACGGCTGTGGGACCGGCACCAAAGGGCCTGCCCGCACACCTT 1478
Query 765 CCCGCTGACGTCGACTCCCCTCAGCAGCCCTGTGTACTGCCTGCGTCTCACCACCAAGCATCTCTATGCTGCCC 838
|||||||||||||||.|.||||.|||||||||||||||||||||.|||||||||||||||||||||||||||.|
Sbjct 1479 CCCGCTGACGTCGACCCGCCTCGGCAGCCCTGTGTACTGCCTGCATCTCACCACCAAGCATCTCTATGCTGCGC 1552
Query 839 TGTCTTACAACCTCCACGTCCTGGATTTTCAAAACCCA------------------------------------ 876
||||||||||||||||||||||||||.||||||||||.
Sbjct 1553 TGTCTTACAACCTCCACGTCCTGGATATTCAAAACCCGTGACCGTCAGGGCCACCCCTGCCTGTGGGCCAAGGA 1626
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1627 GACCAGTGAGTCAGGGACCTCTCTTGCATGAAGGGTGCAGTGATAGTTCCTCCCCACTGCCCCACTGTGCTCCT 1700
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1701 GGGCCTGTGACCCCAGTGCTCAGGCACCTTGCAGTAGAGGCTTCTGACTCCTGGAGCTTTGTGGCTTACCAGAG 1774
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1775 ATGCAGTCCCTCCCAGGAACCTGTTGGAGAGGCAGGACCTGCTGCTTTAGAGGAGTGCAGCTGAACCTCGGCCC 1848
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1849 TGCGACTCTGTTTGGCCAGAGCAAGGATCTGGCCTGGAGAGGCCCATCCTACACCCCTTATTAGAGCCGTGATA 1922
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1923 GCCTACAGAGTGAGGTGAGGTTCTCCCGCCTTCCCAGGTGGTTTCTTTCTGCCACTTCCTGGAAAGAAAGGTGA 1996
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1997 GGCTGCCAATAGCCCGCTAGCACCAGCCAGACCTCACGCTTGACCAACCTCTCGGGGCCAGAGGTTCATTCCTG 2070
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2071 GGGCACTGTGGCCTGGTTTTGTTTTGAAACCAAGAGAGGGCAAAGGGAACCCAGCAGTTCTGAGTGAGTTCTAG 2144
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2145 CCAGCCCTACCTCAGGCTGGCTGTTGAGAGATTTTACAATTTTCATTTTTGTAAAAATAAAGCTTGATTGTTCA 2218
Query 877 -------------------------------------- 876
Sbjct 2219 CAGAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAA 2256
