Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11147
- Subject:
- NR_161438.2
- Aligned Length:
- 6714
- Identities:
- 755
- Gaps:
- 5955
Alignment
Query 1 ----ATGGCTGAAGGAAGCCGAGGTGGCCCTACGTGTAGCGGGGTGGGTGGCAGGCAGGACCCAGTCTCCGGCA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GAACATGGCTGAAGGAAGCCGAGGTGGCCCTACGTGTAGCGGGGTGGGTGGCAGGCAGGACCCAGTCTCCGGCA 74
Query 71 GTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCCGAGCTAAATACGCGCGCTTTCCATGTGGGCGCCTTTGGG 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCCGAGCTAAATACGCGCGCTTTCCATGTGGGCGCCTTTGGG 148
Query 145 GAGCTGTGGCGGGGCCGTCTGCGCGGGGCCGGGGACTTGTCGCTGAGGGAGCCGCCGGCATCCGCTCTGCCTGG 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAGCTGTGGCGGGGCCGTCTGCGCGGGGCCGGGGACTTGTCGCTGAGGGAGCCGCCGGCATCCGCTCTGCCTGG 222
Query 219 GAGCCAGGCAGCTGACTCCGACCGGGAGGATGCCGCGGTGGCCAGGGATCTGGACTGCAGCCTGGAGGCGGCGG 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGCCAGGCAGCTGACTCCGACCGGGAGGATGCCGCGGTGGCCAGGGATCTGGACTGCAGCCTGGAGGCGGCGG 296
Query 293 CTGAGCTGAGGGCGGTGTGCGGCCTTGATAAACTGAAATGCCTTGAGGACGGTGAGGATCCAGAAGTCATTCCG 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGAGCTGAGGGCGGTGTGCGGCCTTGATAAACTGAAATGCCTTGAGGACGGTGAGGATCCAGAAGTCATTCCG 370
Query 367 GAGAATACTGACCTGGTGACTTTGGGGGTTAGAAAAAGGTTCTTGGAACATCGGGAAGAAACCATTACAATAGA 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGAATACTGACCTGGTGACTTTGGGGGTTAGAAAAAGGTTCTTGGAACATCGGGAAGAAACCATTACAATAGA 444
Query 441 TCGAGCCTGCAGACAAGAAACATTCGTTTATGAGATGGAGTCACATGCCATAGGAAAAAAGCCTGAAAATTCAG 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCGAGCCTGCAGACAAGAAACATTCGTTTATGAGATGGAGTCACATGCCATAGGAAAAAAGCCTGAAAATTCAG 518
Query 515 CAGACATGATTGAAGAAGGGGAGCTTATCCTATCTGTGAATATCTTGTACCCTGTTATATTTCATAAGCACAAA 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAGACATGATTGAAGAAGGGGAGCTTATCCTATCTGTGAATATCTTGTACCCTGTTATATTTCATAAGCACAAA 592
Query 589 GAACACAAACCATACCAAACAATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTGAGGGATTCAATTCGATG 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAACACAAACCATACCAAACAATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTGAGGGATTCAATTCGATG 666
Query 663 TGTCAGTGACCTCCAGATTGGTGGTGAATTCAGCAACACTCCTGACCAAGCCCCTGAGCACATCAGCAAAG--- 733
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGTCAGTGACCTCCAGATTGGTGGTGAATTCAGCAACACTCCTGACCAAGCCCCTGAGCACATCAGCAAAGTAA 740
Query 734 --AC---------------------------------CTATACAAA---TCAGCCTTCT-----------TTT- 757
|| ||||..||| ||||.||.|| |||
Sbjct 741 GAACTATCATTGAGTGGTCAGAGTCCCATGATAGAGGCTATGGAAAGTTTCAGACTGCTAGAATGGAAGATTTC 814
Query 758 ---TT--------------------------------------------------------------------- 759
||
Sbjct 815 ACCTTCAATGACTTGTGTATTAAACTGGGTTTTCCTTACTTATACTGTCATCAGGGAGACTGTGAACATGTCAT 888
Query 760 -------------------------------------------------------------------------- 759
Sbjct 889 TGTCATTACTGACATAAGGCTTGTGCATCATGATGACTGCTTGGATAGGACATTGTATCCCCTCCTTATCAAGA 962
Query 760 -------------------------------------------------------------------------- 759
Sbjct 963 AGCATTGGCTATGGACCAGAAAATGTTTTGTTTGTAAAATGTATACAGCCAGATGGGTGACGAACAATGACAGT 1036
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1037 TTTGCACCAGAGGACCCATGCTTCTTTTGTGATGTTTGCTTCCGAATGCTGCACTATGATTCAGAAGGCAACAA 1110
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1111 ACTGGGGGAATTCCTTGCTTATCCTTATGTTGATCCTGGAACCTTTAATTAAGAATAGCTACACTCACAAAAAT 1184
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1185 ACCCCCTCATGAAATAACTGTTCTCTTGGATGGTTACCTTATTTCTAAGAAACGCCACTGAGGAACAGGATCCA 1258
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1259 CTTTGAACAGTCCGCTAAAGCTATCAAAAAAAAGTCCAAATGACAGATTTTCTTATAATGATAGTATTTAAATG 1332
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1333 TTTATAACATAGTTTAATTTTATATTTATTCCAGATAGTATTTAATTTAGTGCTTTTTACCCATTTTGAGTTGA 1406
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1407 GTTGTAGTACTTTATATATTCTGACTTTAAATCCTTTGTCAGACACACATATTCTTTCTCCCAATCCATGCCTT 1480
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1481 CCCTATTCATTCTCTGTCCAGAGTTTTTTGCTAAAGATAGAATTATTAATGATACATCAAGTAGTGGAAGTGTT 1554
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1555 TTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCAAGGTTGTATTTAAATTTGACT 1628
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1629 GAATATCTGGATGGCTAAGAACAGACATTTATCTTACACATGGAAAACTGACGAAACCTATAAGCCTATGTGTT 1702
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1703 TGACAGTGAAGTATGTTTTATGGACTTAAATGCCACAAACAGTTAAGTCCATTGGCTTGGAGATGACAAGCACG 1776
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1777 AGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGTCAGTACACAGATAATCAGTATAGAGAACTTAAGA 1850
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1851 GGCTGGCTTATGTTATACCTAAATTTTTACTTTCTTGTATACAACAATGCTAAAATTGAGCAGATTGATAACTG 1924
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1925 CCAGCAAACCATAGATTTAAGATAAATGAATGATTTACCCAACCCTAAAATTCCATGGGTAAAAATTTTGATTC 1998
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1999 CTTTATTTTCAATACTGCGTTCCTTATAGGTCTTACATGCATATGCAAGGATATTTTATCTTATTCATTCATTT 2072
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2073 CATACTCTCAAAACACCAAACTTCAAAAAGTTAATTATTGTCATAATGCATTATTCCATGTGTGGTGTCAATAC 2146
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2147 ATTTTAGCGGACAAAGAAGAAACATGCCAGTTAAAACATTTCTGCTACTGGGATTCTTTATTAATTATTTGAGA 2220
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2221 ATGTTATTTTGCTAGTTCTTAAGGTTAAGTTTTTCATCAAAGACTCAGGTACCTATTATTGTTCCCTGGTGAAA 2294
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2295 CTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGTTATGTATCAGTTATACAGGTATC 2368
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2369 CCACCAAGTTCAAGTCAAAAGAAATTCCTAACTTTGTATATTTCTGGAGCTATAAAACCCCTGATTTAAGACAG 2442
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2443 CTTTTCTCTTTTTTCGAGGCAGCTTTTCTTTATGCTTATTTCAATCAAATGTAACACGCCTGTCAAATTACATG 2516
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2517 TAACACATTAGCTAATGAAGATAGGCAACTGAAAATGTTGTCATGAACATGTCAACCTGCTTGGTAGTTGAATT 2590
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2591 TGACTTTTATATAATAGTGGATACACATGCACAGAAGTTACTAGAGAAGCAATAGCTATTTCTTTAAACATTCT 2664
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2665 TCAGGCATCAGTACCATTTAAGGACAATTAGACATTCTAGTTTTACTAGGAGAAAGGTCAGTCATCTCTAACAT 2738
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2739 TGTGTTGCAGAATTACACGACACAAACATAAACACATTTCTGCCTATTAAACCAGTTTCTTTGTTTCTAAAGAG 2812
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2813 TTTAATGATACAGGTTTGCTATTTCCATTAGAGCATCCTTTTTCTGGCCAATCGGACAAAATAGAGTTAGCAAA 2886
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2887 GCCCTCACAGCACCCTATGAAAAATCTCTGCTCTTATACAGGATTAGATGCAGACCTCATCTTGACCTAACATC 2960
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2961 TGTAACCAGGTAAGTGTATGAGTAGGAACACAGACAGCAGTACTGTATCAGCAAAATCTATCATATTATTTGAA 3034
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3035 ATCACTGGATATAATATTAATTATAAAGTGTATGGTTCTCTCCAGTTGTTCACATACCAAATCCCAGTCAGTTC 3108
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3109 TCAGATTCAGATAGATGTATCTGCAATTTCTCCAAGCAGCTAAGAAAACCTTCAATGGTCAGTTCTGCTTGGTC 3182
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3183 ATGGTATGACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCTCCCAGGCTGGAGT 3256
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3257 GCAGTGGGGCAATCTCAGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGA 3330
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3331 GGAGCTGGGATTACAGGCACGTGCCACTGCGCCCGGCTGATGTATGACTCTTTTATCCAGTAATCAAAACACAT 3404
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3405 ACGTACATACACACACATACCAGCCCAAAAGAGGTGTTAAAACATACATATTACACGTACTTTTTGGAGGGGTG 3478
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3479 GGGTGGGGTGGGGTGGGGTGGGGTGGGGGTTATCTATCTCAAAATTACCTTTTGGTGCCTTGTCAAGCTGTGGA 3552
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3553 GTTTTGACCACACACACAAATTGAGCCAATGAACAATTTCAATGATCCTGAAAGTTCTTAAGTCTTATGAATAA 3626
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3627 TTATCAAGAGTTCTGAGAAGTTATCTGTAAATCAGCCTATGACACCATTTCTTGAGAGTTATGATTAAAGAAAC 3700
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3701 AGCAATTATGCTTGAAGCGAACATACATCAACTAGTTAGAGCAAGGTCAGCCTGTACAAGCTGACATAAATTAT 3774
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3775 GAGAATGATGCTCTATCTCTAGAATTGGAATATTCTGTGGCTTCTTTGTAAAACTATAGATCTGGTGGGTCATG 3848
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3849 GGAAGAAAGGGAGGGTGAACAAAAGATAAATATTACCTTTATTTTTTATCATCTTGAGCTTACTGTTTAGTTAC 3922
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3923 CCCGTTTCCCAAAACAGCACAACCTCTGTGACCAGTTAACTAAGAAATTATTTCCTTGGCAGCAAACCCAGAAT 3996
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3997 TCCATCACTTACTCTTGTAAATAGCAAGAAAGTAATTTACTAGCAGAGTTTGATAGAAAAATTCTTTAATGAAA 4070
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4071 ACAAGTTTACACGTTGAACTTATGGCTTAACTAGAATAAATCTAAGTAAGTTAAAACTGTATAAGGACCAAACA 4144
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4145 GATAATGACTGGTATATATGCAGGTTCTCTCAAAACGGTGATTCCTAGTTCCATTATAAGACCTCTTTAAAAGC 4218
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4219 AAAAATGCAATTCTGTAGATGAAAACAGTTATCTCAGAGGGTCAACCACACAATGTCATACAGAGACGCTGGTC 4292
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4293 TTAAGCCATTTTTTTCCATATTCATATAATTTCAAAACATGAGAAGTATCCTACTTGCTGAGAAGTGCCAAATG 4366
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4367 ACCCTAATATTCAAAATATCTTAGAAATGCTATCCTTTAGTTAACATACCCTTAAATTTTGTAACATTGATTTT 4440
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4441 ACCCTGGATTTAGTCCATACACGTCAATGTACAGACTTATCAAAGTACAATGCTGGAACAACTAGTGTTTGTAT 4514
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4515 TTTTGGAATCTAGAAAATAAAAACAATATAGCCATGATTTCAAATAGGTGAGTTTCCTTATATAACATTTATTC 4588
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4589 ATATTTATTGTATAAGCATCATGATTTTTTCTTCCAATTAAGTTTTAGTGACTTCCTAAAGACATTTTTAACAA 4662
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4663 CATTCCTCAAAAATAAACTTACTTAGTTTTCAGTTTTAGTTACTAGTGCCTGCCTATAAAAGGACCTTAAATGA 4736
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4737 TTTAACCCTAAAGCCAGATTCATTCCTATATATACCCAGTCAGTTGTCTGCAAAGAAGTCCTAAGACTTCACTG 4810
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4811 AATGCCCAGCCACAAAACTAAATTACCTTCAAAAATTAATGTTTTATAGTTTGTAGAATTCTCAGTTCCATGTC 4884
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4885 AGTTGCTTAATTAGTTGTCATACCAAAAAAAACCATACAGAGCACACATTGTTCCAAAGAAGCTGGATAATGTA 4958
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4959 GCACAATGTAGACTGTGAGATTAAAATTAACTTTTGATAAAAAGGGAGTGAGTACTTGTATAGAAGTAACATTT 5032
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5033 TATCTACCATAAAAATGTGTAACTTCTACAAAACCCACAAACAGTGAAAAGACAGTCTGGTAAATCCAAGGTTT 5106
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5107 GTAAAAACTATGCACAAAACCCACAGTATTTGGGAAAAGAGGCAAGGTTTATACAAGTAGCAGTTTTAAAAATG 5180
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5181 TAACTTTGTTCTACTATCAATTACACATTAACATACACACACTAATTGAAAATATGCTACAACCATGTCTGGAA 5254
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5255 AAGCAGTTTAACATTTTCTAAATGGATTTTATCCCACATTTACTGTATAATGTAGCTGTTAATACTGCACAAGT 5328
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5329 ACACTTAGCGATAATGTTTACTTTACTTTAAAACAAAGGGATTTTCTCCCTCAAAACAAGTTTTCAACATCAAA 5402
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5403 CCTATGCTTATAAAAATTTAAAACTTTCAGCAGTCTATTTCAAATGAAAACCATTACAAACTTCTCAAGTGTTC 5476
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5477 TCTATATTCCAGGTATGTCAACCTAGTTATCTAGTGTAGAATCCTTCAGAGATATTTCAGTCTCTCTCTCTTCA 5550
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5551 CTGGATGGCCTGAAGAAAAGGGGGAAAGGTACAACTGGAATTAGGATTTTCTCCTGATGAAGGAAAAAAAGACA 5624
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5625 TTAAGTCTGCATTATATTTTTAAACCCATGAAAAGACTGAAACCAACCAAACAAAAGAAAAACTTGACTTGTTA 5698
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5699 TTAGAACAGTCATTATTATTTTTTTCTTCTTCAAAACTGTTATTTTACCATGTTGTATCTTCTTCCCAAAGTAA 5772
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5773 TATGCAGATGAAGCAAAATAACTCAGCAAAGTGTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTG 5846
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5847 AATTCTCTTTAAAGAACATGAGAATGTTTTATATCTGTGATACCAACATATTTCAAAATCTTAATAAAAAGAGA 5920
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5921 GGTTGATACACACATAGACAACAAGATTTCCCTCAATTTCAGAATTAGAAGGGATGCTTCTATCTAACTCCTTC 5994
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5995 AGATACACAGTGGAACAAAGCAAGACTTCAACTATGGCTCCATAGCCTATTTTAGGGTGGGTATTAAAAAATAG 6068
Query 760 -------------------------------------------------------------------------- 759
Sbjct 6069 CCTGTGATGGCCGGGCATGTTGGCTCACAGCTGTAATCCCAACACTGGGAAGCCAAGGTGGGTGGATCACCTGA 6142
Query 760 -------------------------------------------------------------------------- 759
Sbjct 6143 GGTCAGGAGTTCGAGGCCGGGCTGGCCAACATGGTGAAACCTCATCTCTACTAAAAATACAAAAAATTAGATGG 6216
Query 760 -------------------------------------------------------------------------- 759
Sbjct 6217 GCGTGGTGGCAGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAAGTG 6290
Query 760 -------------------------------------------------------------------------- 759
Sbjct 6291 GAGGTTGCAGTGAGCACGATCGTGCCATTGCACTCCAGCCTGAGCAACAAGAGTGAAACTCTGTCTCAAAGAAA 6364
Query 760 -------------------------------------------------------------------------- 759
Sbjct 6365 AAACAACAACAACAAAACTGTGATTCTCCATCTAACTTTTTACAATTATCCTTTCACAATTCAAGAAAGTGTGA 6438
Query 760 -------------------------------------------------------------------------- 759
Sbjct 6439 ATGCAAGTCATTACTAACAGTATCTCAGTAAAAGTAGTCCAGGAGCAAATATTTTCTTTTTAACTGGGTTCCCA 6512
Query 760 -------------------------------------------------------------------------- 759
Sbjct 6513 GCTAGTTCCATTCCCTTGAATTCAGTGGCAAAGTCACTGTCAATAAAAGGTTTTTACTCTTCTTCCTTTTTGAA 6586
Query 760 -------------------------------------------------------------------------- 759
Sbjct 6587 TTGTAACTTGCTTACTGAATTCAGGAATTGGGTGATCAAAAGATAACTGCTTATTATAGTAAGATAACCTTGGA 6660
Query 760 ------------------------------------------------------ 759
Sbjct 6661 ACAGAACTGTGATTAAAAACCTGAATAATAAAAAACACACAAGACCCATTAAAA 6714
