Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11147
- Subject:
- NR_161442.2
- Aligned Length:
- 5366
- Identities:
- 758
- Gaps:
- 4607
Alignment
Query 1 ----ATGGCTGAAGGAAGCCGAGGTGGCCCTACGTGTAGCGGGGTGGGTGGCAGGCAGGACCCAGTCTCCGGCA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GAACATGGCTGAAGGAAGCCGAGGTGGCCCTACGTGTAGCGGGGTGGGTGGCAGGCAGGACCCAGTCTCCGGCA 74
Query 71 GTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCCGAGCTAAATACGCGCGCTTTCCATGTGGGCGCCTTTGGG 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCCGAGCTAAATACGCGCGCTTTCCATGTGGGCGCCTTTGGG 148
Query 145 GAGCTGTGGCGGGGCCGTCTGCGCGGGGCCGGGGACTTGTCGCTGAGGGAGCCGCCGGCATCCGCTCTGCCTGG 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAGCTGTGGCGGGGCCGTCTGCGCGGGGCCGGGGACTTGTCGCTGAGGGAGCCGCCGGCATCCGCTCTGCCTGG 222
Query 219 GAGCCAGGCAGCTGACTCCGACCGGGAGGATGCCGCGGTGGCCAGGGATCTGGACTGCAGCCTGGAGGCGGCGG 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGCCAGGCAGCTGACTCCGACCGGGAGGATGCCGCGGTGGCCAGGGATCTGGACTGCAGCCTGGAGGCGGCGG 296
Query 293 CTGAGCTGAGGGCGGTGTGCGGCCTTGATAAACTGAAATGCCTTGAGGACGGTGAGGATCCAGAAGTCATTCCG 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGAGCTGAGGGCGGTGTGCGGCCTTGATAAACTGAAATGCCTTGAGGACGGTGAGGATCCAGAAGTCATTCCG 370
Query 367 GAGAATACTGACCTGGTGACTTTGGGGGTTAGAAAAAGGTTCTTGGAACATCGGGAAGAAACCATTACAATAGA 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGAATACTGACCTGGTGACTTTGGGGGTTAGAAAAAGGTTCTTGGAACATCGGGAAGAAACCATTACAATAGA 444
Query 441 TCGAGCCTGCAGACAAGAAACATTCGTTTATGAGATGGAGTCACATGCCATAGGAAAAAAGCCTGAAAATTCAG 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCGAGCCTGCAGACAAGAAACATTCGTTTATGAGATGGAGTCACATGCCATAGGAAAAAAGCCTGAAAATTCAG 518
Query 515 CAGACATGATTGAAGAAGGGGAGCTTATCCTATCTGTGAATATCTTGTACCCTGTTATATTTCATAAGCACAAA 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAGACATGATTGAAGAAGGGGAGCTTATCCTATCTGTGAATATCTTGTACCCTGTTATATTTCATAAGCACAAA 592
Query 589 GAACACAAACCATACCAAACAATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTGAGGGATTCAATTCGATG 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAACACAAACCATACCAAACAATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTGAGGGATTCAATTCGATG 666
Query 663 TGTCAGTGACCTCCAGATTGGTGGTGAATTCAGCAACACTCCTGACCAAGCCCCTGAGCACATCAGCAAA---- 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGTCAGTGACCTCCAGATTGGTGGTGAATTCAGCAACACTCCTGACCAAGCCCCTGAGCACATCAGCAAAGTAA 740
Query 733 -GACCTATACAAATCAGCCTTCTTTTTT---------------------------------------------- 759
|||||||||||||||||||||||||.|
Sbjct 741 GGACCTATACAAATCAGCCTTCTTTTATTTTGAAGGAACATTTTATAATGATAAAAGATACCCAGAATGCAGAG 814
Query 760 -------------------------------------------------------------------------- 759
Sbjct 815 ATTTGAGCAGGCTTGTGCATCATGATGACTGCTTGGATAGGACATTGTATCCCCTCCTTATCAAGAAGCATTGG 888
Query 760 -------------------------------------------------------------------------- 759
Sbjct 889 CTATGGACCAGAAAATGTTTTGTTTGTAAAATGTATACAGCCAGATGGGTGACGAACAATGACAGTTTTGCACC 962
Query 760 -------------------------------------------------------------------------- 759
Sbjct 963 AGAGGACCCATGCTTCTTTTGTGATGTTTGCTTCCGAATGCTGCACTATGATTCAGAAGGCAACAAACTGGGGG 1036
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1037 AATTCCTTGCTTATCCTTATGTTGATCCTGGAACCTTTAATTAAGAATAGCTACACTCACAAAAATACCCCCTC 1110
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1111 ATGAAATAACTGTTCTCTTGGATGGTTACCTTATTTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAAC 1184
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1185 AGTCCGCTAAAGCTATCAAAAAAAAGTCCAAATGACAGATTTTCTTATAATGATAGTATTTAAATGTTTATAAC 1258
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1259 ATAGTTTAATTTTATATTTATTCCAGATAGTATTTAATTTAGTGCTTTTTACCCATTTTGAGTTGAGTTGTAGT 1332
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1333 ACTTTATATATTCTGACTTTAAATCCTTTGTCAGACACACATATTCTTTCTCCCAATCCATGCCTTCCCTATTC 1406
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1407 ATTCTCTGTCCAGAGTTTTTTGCTAAAGATAGAATTATTAATGATACATCAAGTAGTGGAAGTGTTTTGAAAAT 1480
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1481 TCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCAAGGTAAAGATCCTTCAAATAACTGTAATG 1554
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1555 GAAACTAGGGAGAATGAATTATTTACAAATAAGACAAAATTAATAGCTTTGGGATTATTTATTTTTTGAGACAA 1628
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1629 AATCTCGCTCTTGTTGCCCAGGCTGGAATACAGTGGCGCAATCTCAGCTCACTGCAGCCTCCGCCTCCCGGATT 1702
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1703 CAAGTGATTCTCCTGCCACAGCCTCCTGAGTAGCTGGGATTGCAGGCACCTGGCACCATGCCTGGCTAATTTTT 1776
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1777 GTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTAACCTCAGGCGATCCACC 1850
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1851 CGCCTAAGCCTCCCAAAATTTTGGGATCACAGGCGTGAGCCACCGCGCCCGGCTGCTTTGGGGGAATTTAATCT 1924
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1925 TAGTGTGCTGTTTAGTAATGTTAGGTTTTGTTTTGGAGGAAACTAGGCATACAAGACATGTTAATAAGACTATG 1998
Query 760 -------------------------------------------------------------------------- 759
Sbjct 1999 TGAATAATGAATTTAAAAAGATCTTGAGTATATACTCATAACTCCAGAAATAACATTAACTTGAAGCTTTATTT 2072
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2073 CTTGACAAAAGCTTTATGAATGTTATGAGTTTAAAATATGTCAATTTAATACTATGATTTAAAAAACAATAGCA 2146
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2147 GATTTCGTATGACTGTGGGGACATGGAAAAATCAAGATCCTATTGATTGCTAGCTCTGGCTCACTTATTCTCCG 2220
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2221 GTAATGATACTATTGGATATATACCAAAATTATATAAGCAAAAAGAAAAAAAATAAGTTTTCCTGGCCCAGGTC 2294
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2295 TTCCATTCTTCTGGTCCCCTTACTATAGTAATTCTAGTTACTCTCATCTTATTCTGAGGAAAAAAAAAAAAACC 2368
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2369 AAAACTTTTTAAACTTATTTTTTGACATAGGGTCTTACTGTGTCACCCAGGCTGGAGTACAGTGGCGTGATCTT 2442
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2443 GGCTCACTGGAGCCCTGACCTCCCTAGGCTCAGGTGATCCTCCCACCTCAGCCTACCGAGTAGCTGAGACATGG 2516
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2517 TGGCACAGGCCACCATGGCGGGCTAATTTTTTTATTTCTTGTAGATACAGGGTTTCACTATGTTGCGCAGAATA 2590
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2591 GTCTCGAACTCCTGACCTCAAGTGATCCATCCGCCTTGGCCTCCCAGAGTGCTGCGATTACAGGCATGAACCAC 2664
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2665 AGCGCCCAGCAAAATAAACTTTCTTTATTTTCAGGTCTAGACCATCAGATAGATTTATTCAAATATTTTCTGGG 2738
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2739 AACCTTTATGGGTAGAACATTTAATACTGTTTAGAAGACTTTTAGGAATACTATAGATTTCAAATGCATCATTT 2812
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2813 AAAATAAATAAATTCCACTTTCTCTCTCCTAGGTTGTATTTAAATTTGACTGAATATCTGGATGGCTAAGAACA 2886
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2887 GACATTTATCTTACACATGGAAAACTGACGAAACCTATAAGCCTATGTGTTTGACAGTGAAGTATGTTTTATGG 2960
Query 760 -------------------------------------------------------------------------- 759
Sbjct 2961 ACTTAAATGCCACAAACAGTTAAGTCCATTGGCTTGGAGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTC 3034
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3035 TCATTCACTGATTCAGTCAGTACACAGATAATCAGTATAGAGAACTTAAGAGGCTGGCTTATGTTATACCTAAA 3108
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3109 TTTTTACTTTCTTGTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAGAT 3182
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3183 AAATGAATGATTTACCCAACCCTAAAATTCCATGGGTAAAAATTTTGATTCCTTTATTTTCAATACTGCGTTCC 3256
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3257 TTATAGGTCTTACATGCATATGCAAGGATATTTTATCTTATTCATTCATTTCATACTCTCAAAACACCAAACTT 3330
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3331 CAAAAAGTTAATTATTGTCATAATGCATTATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAAC 3404
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3405 ATGCCAGTTAAAACATTTCTGCTACTGGGATTCTTTATTAATTATTTGAGAATGTTATTTTGCTAGTTCTTAAG 3478
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3479 GTTAAGTTTTTCATCAAAGACTCAGGTACCTATTATTGTTCCCTGGTGAAACTGAGGAGAAAAGTTAATCAACC 3552
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3553 AGGTTACTCCCACAGTTTGCCCGTGTGTTATGTATCAGTTATACAGGTATCCCACCAAGTTCAAGTCAAAAGAA 3626
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3627 ATTCCTAACTTTGTATATTTCTGGAGCTATAAAACCCCTGATTTAAGACAGCTTTTCTCTTTTTTCGAGGCAGC 3700
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3701 TTTTCTTTATGCTTATTTCAATCAAATGTAACACGCCTGTCAAATTACATGTAACACATTAGCTAATGAAGATA 3774
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3775 GGCAACTGAAAATGTTGTCATGAACATGTCAACCTGCTTGGTAGTTGAATTTGACTTTTATATAATAGTGGATA 3848
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3849 CACATGCACAGAAGTTACTAGAGAAGCAATAGCTATTTCTTTAAACATTCTTCAGGCATCAGTACCATTTAAGG 3922
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3923 ACAATTAGACATTCTAGTTTTACTAGGAGAAAGGTCAGTCATCTCTAACATTGTGTTGCAGAATTACACGACAC 3996
Query 760 -------------------------------------------------------------------------- 759
Sbjct 3997 AAACATAAACACATTTCTGCCTATTAAACCAGTTTCTTTGTTTCTAAAGAGTTTAATGATACAGGTTTGCTATT 4070
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4071 TCCATTAGAGCATCCTTTTTCTGGCCAATCGGACAAAATAGAGTTAGCAAAGCCCTCACAGCACCCTATGAAAA 4144
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4145 ATCTCTGCTCTTATACAGGATTAGATGCAGACCTCATCTTGACCTAACATCTGTAACCAGGTAAGTGTATGAGT 4218
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4219 AGGAACACAGACAGCAGTACTGTATCAGCAAAATCTATCATATTATTTGAAATCACTGGATATAATATTAATTA 4292
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4293 TAAAGTGTATGGTTCTCTCCAGTTGTTCACATACCAAATCCCAGTCAGTTCTCAGATTCAGATAGATGTATCTG 4366
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4367 CAATTTCTCCAAGCAGCTAAGAAAACCTTCAATGGTCAGTTCTGCTTGGTCATGGTATGACTCTTTTTTTTTTT 4440
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4441 TTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCTCCCAGGCTGGAGTGCAGTGGGGCAATCTCAGCTCAC 4514
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4515 TGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGGAGCTGGGATTACAGGCACGTG 4588
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4589 CCACTGCGCCCGGCTGATGTATGACTCTTTTATCCAGTAATCAAAACACATACGTACATACACACACATACCAG 4662
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4663 CCCAAAAGAGGTGTTAAAACATACATATTACACGTACTTTTTGGAGGGGTGGGGTGGGGTGGGGTGGGGTGGGG 4736
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4737 TGGGGGTTATCTATCTCAAAATTACCTTTTGGTGCCTTGTCAAGCTGTGGAGTTTTGACCACACACACAAATTG 4810
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4811 AGCCAATGAACAATTTCAATGATCCTGAAAGTTCTTAAGTCTTATGAATAATTATCAAGAGTTCTGAGAAGTTA 4884
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4885 TCTGTAAATCAGCCTATGACACCATTTCTTGAGAGTTATGATTAAAGAAACAGCAATTATGCTTGAAGCGAACA 4958
Query 760 -------------------------------------------------------------------------- 759
Sbjct 4959 TACATCAACTAGTTAGAGCAAGGTCAGCCTGTACAAGCTGACATAAATTATGAGAATGATGCTCTATCTCTAGA 5032
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5033 ATTGGAATATTCTGTGGCTTCTTTGTAAAACTATAGATCTGGTGGGTCATGGGAAGAAAGGGAGGGTGAACAAA 5106
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5107 AGATAAATATTACCTTTATTTTTTATCATCTTGAGCTTACTGTTTAGTTACCCCGTTTCCCAAAACAGCACAAC 5180
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5181 CTCTGTGACCAGTTAACTAAGAAATTATTTCCTTGGCAGCAAACCCAGAATTCCATCACTTACTCTTGTAAATA 5254
Query 760 -------------------------------------------------------------------------- 759
Sbjct 5255 GCAAGAAAGTAATTTACTAGCAGAGTTTGATAGAAAAATTCTTTAATGAAAACAAGTTTACACGTTGAACTTAT 5328
Query 760 -------------------------------------- 759
Sbjct 5329 GGCTTAACTAGAATAAATCTAAGTAAGTTAAAACTGTA 5366
