Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11193
- Subject:
- NM_001081055.1
- Aligned Length:
- 3778
- Identities:
- 751
- Gaps:
- 2954
Alignment
Query 1 ATGGACGCCTCTGAGGAGCCGCTGCCGCCGGTGATCTACACCATGGAGAACAAGCCCATCGTCACCTGTGCTGG 74
|||||||||.||||||||||.|.|||.||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGACGCCCCTGAGGAGCCACAGCCACCGGTGGTCTACACCATGGAGAACAAGCCCATCGTCACCTGTGCTGG 74
Query 75 AGATCAGAATTTATTTACCTCTGTTTATCCAACGCTCTCTCAGCAGCTTCCAAGAGAACCAATGGAATGGAGAA 148
|||||||||||||||||||||..|||||||.||.||.||.||||||||||||||||||||||||||||||||||
Sbjct 75 AGATCAGAATTTATTTACCTCCATTTATCCGACACTTTCCCAGCAGCTTCCAAGAGAACCAATGGAATGGAGAA 148
Query 149 GGTCCTATGGCCGGGCTCCGAAGATGATTCACCTAGAGTCTAACTTTGTTCAATTCAAAGAGGAGCTGCTGCCC 222
||||.||||||||.|||||.||.|||||||||||.||.||.|||||||||||.|||||.|||||||||||||||
Sbjct 149 GGTCTTATGGCCGAGCTCCAAAAATGATTCACCTGGAATCCAACTTTGTTCAGTTCAAGGAGGAGCTGCTGCCC 222
Query 223 AAAGAAGGAAACAAAGCTCTGCTCACGTTTCCCTTCCTCCATATTTACTGGACAGAGTGCTGTGATACCGAAGT 296
||||||||.||||||||.||||||||.||.|||||||||||.||.|||||||||||||||||.|||||.|||||
Sbjct 223 AAAGAAGGGAACAAAGCCCTGCTCACCTTCCCCTTCCTCCACATCTACTGGACAGAGTGCTGCGATACTGAAGT 296
Query 297 GTATAAAGCTACAGTAAAAGATGACCTCACCAAGTGGCAGAATGTTCTGAAGGCTCATAGCTCTGTGGACTGGT 370
|||.||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||.
Sbjct 297 GTACAAAGCTACGGTAAAAGACGACCTCACCAAGTGGCAGAATGTTCTGAAAGCTCATAGCTCTGTGGACTGGC 370
Query 371 TAATAGTGATAGTTGAAAATGATGCCAAGAAAAAAAACAAAACCAACATCCTTCCCCGAACCTCTATTGTGGAC 444
||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 371 TAATAGTGGTAGTTGAAAATGATGCCAAGAAAAAAAACAAAACCAACATCCTTCCCCGAACTTCTATTGTGGAC 444
Query 445 AAAATAAGAAATGATTTTTGTAATAAACAGAGTGACAGGTGTGTTGTGCTCTCCGACCCCTTGAAGGACTCTTC 518
||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||
Sbjct 445 AAAATAAGAAATGACTTTTGTAATAAACAGAGTGACAGGTGTGTTGTGCTCTCTGACCCTTTGAAGGACTCTTC 518
Query 519 TCGAACTCAGGAATCCTGGAATGCCTTCCTGACCAAACTCAGGACATTGCTTCTTATGTCTTTTACCAAAAACC 592
|||||||||||||||||||||||||||||||||||||||||||||..||||.||.||||||||.||||||||||
Sbjct 519 TCGAACTCAGGAATCCTGGAATGCCTTCCTGACCAAACTCAGGACTCTGCTGCTCATGTCTTTCACCAAAAACC 592
Query 593 TAGGCAAGTTTGAGGATGACATGAGAACCTTGAGGGAGAAGAGGACTGAGCCAGGCTGGAGCTTTTGTGAATAT 666
|.|||||||||||||||||||||.|.||.||||||||.||||||||.|||||||||||||||||.||.|||||.
Sbjct 593 TCGGCAAGTTTGAGGATGACATGCGGACTTTGAGGGAAAAGAGGACAGAGCCAGGCTGGAGCTTCTGCGAATAC 666
Query 667 TTCATGGTTCAGGAGGAGCTTGCCTTTGTTTTCGAGATGCTGCAGCAGTTCGAGGACGCCCTGGTGCAGTACGA 740
|||||||||||||||||||||||.|||||.||.|||||||||||||||||.||||||||||||||.||||||||
Sbjct 667 TTCATGGTTCAGGAGGAGCTTGCGTTTGTCTTTGAGATGCTGCAGCAGTTTGAGGACGCCCTGGTACAGTACGA 740
Query 741 CGAACTGGACGCCCTCTTCTCTCAGTATGTGGTCAACTTCGGGGCCGGG---GGTATAAAATGTC---CTTT-- 806
|||.|||||.|||||||||||.|||||.||||||||||||||.||.||| |||...||.||.| ||||
Sbjct 741 CGAGCTGGATGCCCTCTTCTCACAGTACGTGGTCAACTTCGGAGCTGGGGATGGTGCCAACTGGCTGACTTTTT 814
Query 807 ----CCA-CAACTCAGTGGCCTGCTGG----------------------------------------------- 828
||| | |.|||....|||||
Sbjct 815 TCTGCCAGC----CGGTGAAGAGCTGGAACGGACTGGTGCTCCGCAAGCCTATAGACATGGAGAAGCGTGAGCT 884
Query 829 -------------------------------------------------------------------------- 828
Sbjct 885 GATACAGAAGCAAGAAGCTACTCTGCTGGACCTGCGAAGCTACTTGTTCTCCCGCCAGTGCACCTTGCTCCTCT 958
Query 829 -------------------------------------------------------------------------- 828
Sbjct 959 TCCTACAGCGGCCCTGGGAGGTGGCTCAGCGCGCCCTGGAGCTGCTGCATAGCTGTGTGCAGGAGCTGAAGCTC 1032
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1033 TTAGAAGTCTCTGTCCCTCCCGGTGCTCTGGATTGCTGGGTCTTTCTGAGCTGTCTAGAGGTGCTGCAGAGGAT 1106
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1107 AGAAGGTTGCTGTGACCGGGCCCAGATAGACTCCAACATTGCCCACATGGTGGGGCTGTGGAGCTATGCAATGG 1180
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1181 AAAAGCTAAAGTCCTTAGGGTACCTATGTGGACTTGTATCAGAAAAAGGGCCCAACTCAGAAGATCTCAACAGA 1254
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1255 ACAGTTGATCTTTTGGCAGGACTAGGAGCCGAGAGACCTGAAACAGCCAACACAGCTCAGAGTCCTTATAAGAA 1328
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1329 GCTCCAGGAAGCACTGTCCTCAGTAGAGGCCTTTGAAAAGCACTACCTGGACTTGTCCCATGCCACCATTGAGA 1402
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1403 TGTATACAAGTATCGGGCGGATTCGATCTGCCAAGCTTGTTGGAAAAGATCTGGCAGAATTTTACATGAGGAAA 1476
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1477 AGGTCGCCACAGAAGGCAGAAATGTATCTTCAGGGAGCTTTGAAAAATTACCTGGCTGAGGGCTGGGCCCTGCC 1550
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1551 TGTCACACACACAAGGAAGCAGCTAGCAGAGTGCCAAAAACACCTTGGGCAAATGGAAAACTACTTGCAGACCA 1624
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1625 GCAGTCTTCTGGCCAGTGATCATCACCTGACAGAGGAGGAGCGGAAATACTTCTGCCAGGAGATCCTTAGCTTT 1698
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1699 GCCAGCCAGCAAGAGGACAACCCAGGTCACAAGGTGGTACTGCCCATGCAGTTTGCAAGGCTGAAGGATCTCCA 1772
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1773 TTTTGACCCTCCCAATGCTGTGGTCCATGCGGGTGGTGTCCTGACTGTGGAGATAACGGTATGCAGCCAGATGC 1846
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1847 CCATCCCTGTCCACGTGGACCAGATTGCTGTCAATGTCCACTTCAGCATCGAAAAAAACAACTACCGGAAGACA 1920
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1921 GCCGAGTGGCTGACCAAGCACAAGACTTCCAATGGAATCATCACCTTCCCAGCTGAGGCCTCACTGTTCCCTGC 1994
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1995 ATCTCAGAACAGCCTGCCCGCTCTGGAGTTGTCGGAGATGTTGGAGAGAAGCCCCTCTGATAACTCATTGAACA 2068
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2069 CCACAGGCATTATCTGTAGGAATGTCCACATGCTTTTAAGGAGGCAGGAGAGTGGCTCTTCTCTAGAGCCGCCC 2142
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2143 TCAGGGTTGGCCCTGGAGGATGGGGCCCACGTGCTGAGGTGCAGCAGTGTGACCCTGCAGCCAGGCGCCAACAA 2216
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2217 GATAGCCTTCAAGACCCAGGCCAAAGAACCTGGAACATACACGCTGCGGCAGCTTCGGGCCTCAGTGGGCCCTG 2290
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2291 TGTGGTTTGTCCTGGCACACATCCACCCCATTGTACAGTATGACGTGTACTCTCAGGAGCCTCAGCTGCACGTG 2364
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2365 GAACCGCTGGCTGATAGCCTTTTGGCTGGCATCCCTCAGAAAGTCAAGTTTACTGTCACTACTGGCCATTACAC 2438
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2439 AGTAAAAAATGGAGACAGCCTCCAGCTCAGCAACGTGGAAGCAATGCTCATCTTGTGTCAGGCAGAGAACAGAG 2512
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2513 CCGTGGTCTACTCCAACTCAAGAGAAGAGTGCTCCACTGCCCTGCTCCGGATCCAGTCCTCTGACAAGGTCACA 2586
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2587 AGCATCGGTCTTCCCACTGCACCTGCGTACCACGTGATCGAGTTTGAGCTGGAGGTTCTGTCTTTACCTTCAGC 2660
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2661 TCCAGCATCTGGCGGGGACACCAGTGTTCCGGGGACACCAGAGCTCCACAGGAAGCAGAAGGATTCTCAGAGAG 2734
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2735 CTGGCCATTGCATGGTCACCACAGATCACAAGGTGTCCATTGATTGCCCGTGGTCTATCTACTCCACTGTCATT 2808
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2809 GCACTGACATTCAGTGTGCCCTTCAGGACCGAGCACTCTCTGCTGTCTGCTGGAACCCGAAAATATGTGCAAGT 2882
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2883 CTGTGTCCAGAACCTGTCAGAACTGGACTTTGAGCTGTCAGACAGTAATCTGGAAGACAAGGGTCATGCTACTG 2956
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2957 ACCTGAGGCTGGCACCTCTGAACACACAGTCCCAGCAGCTTATCCACAGCAAGCAGTCCGTGTTCTTTGTCTGG 3030
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3031 GAGCTGACGTGGACACAGGAGCCACCCCCTCCTCTGCACTGCCAGTTCTCTGTGGGGTTCTCCCCAGCTTCTGA 3104
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3105 AGAGCAGCTGACCGTTTCCTTGAAGCCCTACACTTACGAGTTCCAAGTGGAGAACTTTTTTACACTGTACAGTG 3178
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3179 TGAGAGCTGAGATCCTTCCTGCTTCAGGAGCTGAGTACTGTAAGACAGGCTCGCTCTGCTCCTTGGAGGTGTCT 3252
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3253 ATCACGCGGCTCGCCGACCTCCTGGATGTGGACAAGGATGAAGCACTCGTGGAATCTGAGGACTATTTTTCCAC 3326
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3327 AAAACTTATGTATGAAGTTGTGGACAACAGCAGCAATTGGGCTGTGTGTGGGAAGAGCTGTGGTGTCATCGCCA 3400
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3401 TGCCTTTGGCTGCCCAGGCCACTCACAGAGTCCACATGGAAGTGATGCCTCTGTTTGCTGGTTACCTCCCCTTG 3474
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3475 CCTGATGTACGACTGTTCAAGTACCTCCCCCACCACTCTGCTCATGCCTCTCAACTGGATGCTGACAGCTGGAT 3548
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3549 AGAAAATGACAGCCTGTCAGTGGACAAGCACCTAGATGACCAGCTGGACTGCAGCAGCTTGCGGAGTAGAGGCA 3622
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3623 GCACACACTCCACTTCCAGCAGCGAGCACAAAGGCTTGCCCATGCCCCGGCTCCAAGCACTGCCCGCTGGCCAG 3696
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3697 GTCTTCAACTCCAGCACTGGCATGCAGGTCCTGGTCATTCCCAGTCAAGACGACCACGTCCTGGAAGTCAGTGT 3770
Query 829 ---- 828
Sbjct 3771 TACC 3774
