Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11240
• Subject: NM_013250.4
• Aligned Length: 1572
• Identities: 871
• Gaps: 681

Alignment

Query    1  ATGCAGCCTCTGAGCAAGTTGATGGCTATCTCAAAACCTCGAAACCTGTCTCTACGTGAACAAAGAGAGGTTCT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCAGCCTCTGAGCAAGTTGATGGCTATCTCAAAACCTCGAAACCTGTCTCTACGTGAACAAAGAGAGGTTCT  74

Query   75  GAGAGCAGATATGTCTTGGCAGCAGGAAACCAACCCCGTCGTGGAGACACATGACTCTGAGGCATCTCGTCAAA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAGAGCAGATATGTCTTGGCAGCAGGAAACCAACCCCGTCGTGGAGACACATGACTCTGAGGCATCTCGTCAAA  148

Query  149  AGTTCAGACATTTCCAGTATTTGAAAGTGTCTGGGCCCCATGAAGCCCTGAGCCAACTCTGGGAGCTCTGTCTT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGTTCAGACATTTCCAGTATTTGAAAGTGTCTGGGCCCCATGAAGCCCTGAGCCAACTCTGGGAGCTCTGTCTT  222

Query  223  CAATGGCTGAGACCAGAGATTCATACAAAGAAGCAGATTATAGAACTGTTGGTGCTGGAACAATTCCTGGCAAT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAATGGCTGAGACCAGAGATTCATACAAAGAAGCAGATTATAGAACTGTTGGTGCTGGAACAATTCCTGGCAAT  296

Query  297  CCTGCCTGAAGAAGTCAGGACTTGGGTGAATTTACAACATCCAAACAACAGTAAAGATATGGTGACCCTCATAG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCTGCCTGAAGAAGTCAGGACTTGGGTGAATTTACAACATCCAAACAACAGTAAAGATATGGTGACCCTCATAG  370

Query  371  AAGATGTGATTGAAATGCTTGAAGATGAAGATATGCCCTGCAAGGACTCTGCCCTGCAGATGGGGAGCATCAAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAGATGTGATTGAAATGCTTGAAGATGAAGATATGCCCTGCAAGGACTCTGCCCTGCAGATGGGGAGCATCAAG  444

Query  445  GAGAAAATGAAAGCTGGCTCACGAACAGGCAAACCACAGGAACCAGTGACATTCAAAGATGTGGTTGTGGAATT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAGAAAATGAAAGCTGGCTCACGAACAGGCAAACCACAGGAACCAGTGACATTCAAAGATGTGGTTGTGGAATT  518

Query  519  CAGCAAGGAAGAGTGGGGGCAACTGGACTCTGCTGTAAAGAACCTGTACAGGAATGTGATGCTGGAAAACTTTA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAGCAAGGAAGAGTGGGGGCAACTGGACTCTGCTGTAAAGAACCTGTACAGGAATGTGATGCTGGAAAACTTTA  592

Query  593  GGAACCTGAATTCATTGCGTAAAGCACATCTACTTTCCAAACCATTTGAGAGCCTTAAGTTGGAGAGTAAGAAA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGAACCTGAATTCATTGCGTAAAGCACATCTACTTTCCAAACCATTTGAGAGCCTTAAGTTGGAGAGTAAGAAA  666

Query  667  AAAAGATGGATAATGGAGAAAGAAATACCAAGGAAGACTATTTTTGACATGAAGAGTATTTCTGGAGAAGAATC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAAAGATGGATAATGGAGAAAGAAATACCAAGGAAGACTATTTTTGACATGAAGAGTATTTCTGGAGAAGAATC  740

Query  741  ATCCCATGGAGTGATTATGACAAGGCTTACCGAAAGTGGTCACCCTTCTTCAGATGCCTGGAAAGATG------  808
            |||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||.||      
Sbjct  741  ATCCCATGGAGTGATTATGACAAGGCTTACCGAAAGTGGACACCCTTCTTCAGATGCCTGGAAAGGTGAGAATT  814

Query  809  --------------------------------------------GAG--TTTCCCTCTTG-------TTGCCC-  828
                                                        |||  ||||..||.||       ||.|.| 
Sbjct  815  GGTTATATAGGAACCAGAAAAAATGGGACATAAATTTGCCACAAGAGGCTTTCATTCCTGAGACAATTTACACT  888

Query  829  -AGG-------------CTGGAGT-------------------ATAATGATGCAGTCTCGGCTCA----CTGCA  865
             |||             .||.|||                   |||.|.||.|||  |..|||||    .|||.
Sbjct  889  GAGGAGGAAGATTTTGAATGTAGTGAAAATAAGAAAAGCTTTGATATTAATTCAG--TTAGCTCAATTTGTGCT  960

Query  866  ACCTCCACCTCTGGGTTCAAGTG---ATTCTCCTGCCTCA--------GCCTCC----TGAG------------  912
            |              |.||||||   ||||     |.|||        |.||||    ||.|            
Sbjct  961  A--------------TACAAGTGGGAATTC-----CTTCAAGAAAGGGGTCTCCAAAATGTGATAAGTTTAAAA  1015

Query  913  --------------------------------------------------------------------------  912
                                                                                      
Sbjct 1016  CTTACTTCAAATTTAATTTAGACTCAGTAGGTAAGCAACATTCAGAATATGAATATGGGAATGACTTGAGTTTG  1089

Query  913  --------------------------------------------------------------------------  912
                                                                                      
Sbjct 1090  AGTACAGATATTCGACACCAAAAAAGTCATACTACAATGAATTCCTATGAATGTTATCAATGTGGGAAAGCCTT  1163

Query  913  --------------------------------------------------------------------------  912
                                                                                      
Sbjct 1164  CTGCCGAAGTTCATCCCTTATTCGACATCAGATCATTCACACAGGAGAGAAACCCTATAAATGCAGTGAATGTG  1237

Query  913  --------------------------------------------------------------------------  912
                                                                                      
Sbjct 1238  GGAGATTCTTCAACCGACGTACAAACCTTACTAAGCATCAAAAACTTCATGCTGAAGCAAAGGCCTGCACAAGC  1311

Query  913  --------------------------------------------------------------------------  912
                                                                                      
Sbjct 1312  AATAAATGTGGAAAGGCCTTCAGTAAAAGTGAAGACAGTAATAATCCAACACTCCATTTTGGAAACAATTTCTA  1385

Query  913  --------------------------------------------------------------------------  912
                                                                                      
Sbjct 1386  TCAATGTGTTAACTGTGGAAAATCCTTCAACCGGAGCTCCTCTCTTATTCGACACCAAATGATTCACACGGGAG  1459

Query  913  --------------------------------------------------------------------------  912
                                                                                      
Sbjct 1460  AGAAACCATTCAAATGTAAGGAATGTAGTAAAGCCTTCAACAGGAGTTCAAACCTTGTTAAACATCAAAAACTG  1533

Query  913  ------------------  912
                              
Sbjct 1534  CATACTCGAGATAAGTCC  1551