Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11270
• Subject: XM_011525326.3
• Aligned Length: 1335
• Identities: 832
• Gaps: 498

Alignment

Query    1  ATGTCGTCCAACTGCACCAGCACCACGGCGGTGGCGGTGGCGCCGCTCAGCGCCAGCAAGACCAAGACCAAGAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTCGTCCAACTGCACCAGCACCACGGCGGTGGCGGTGGCGCCGCTCAGCGCCAGCAAGACCAAGACCAAGAA  74

Query   75  GAAGCATTTCGTGTGCCAGAAAGTGAAGCTATTCCGGGCCAGCGAGCCGATCCTCAGCGTCCTGATGTGGGGGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAAGCATTTCGTGTGCCAGAAAGTGAAGCTATTCCGGGCCAGCGAGCCGATCCTCAGCGTCCTGATGTGGGGGG  148

Query  149  TGAACCACACGATCAATGAGCTGAGCAATGTTCCTGTTCCTGTCATGCTAATGCCAGATGACTTCAAAGCCTAC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGAACCACACGATCAATGAGCTGAGCAATGTTCCTGTTCCTGTCATGCTAATGCCAGATGACTTCAAAGCCTAC  222

Query  223  AGCAAGATCAAGGTGGACAATCATCTCTTCAATAAGGAGAACCTGCCCAGCCGCTTTAAGTTTAAGGAGTATTG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGCAAGATCAAGGTGGACAATCATCTCTTCAATAAGGAGAACCTGCCCAGCCGCTTTAAGTTTAAGGAGTATTG  296

Query  297  CCCCATGGTGTTCCGAAACCTTCGGGAGAGGTTTGGAATTGATGATCAGGATTACCAGAATTCAGTGACGCGCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCCCATGGTGTTCCGAAACCTTCGGGAGAGGTTTGGAATTGATGATCAGGATTACCAGAATTCAGTGACGCGCA  370

Query  371  GCGCCCCCATCAACAGTGACAGCCAGGGTCGGTGTGGCACGCGTTTCCTCACCACCTACGACCGGCGCTTTGTC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCGCCCCCATCAACAGTGACAGCCAGGGTCGGTGTGGCACGCGTTTCCTCACCACCTACGACCGGCGCTTTGTC  444

Query  445  ATCAAGACTGTGTCCAGCGAGGACGTGGCGGAGATGCACAACATCTTAAAGAAATACCACC-------------  505
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  445  ATCAAGACTGTGTCCAGCGAGGACGTGGCGGAGATGCACAACATCTTAAAGAAATACCACCAGATGGCTGGATC  518

Query  506  --------------------------------------------------------------------AGTTTA  511
                                                                                ||||||
Sbjct  519  CCTGGCCTGCCTCTGCATCCTGTCTCTTCCCTGCGGCATTCCCATATCAGGCTGGCAGAAGAGATGCAAGTTTA  592

Query  512  TAGTGGAGTGTCATGGCAACACGCTTTTGCCACAGTTCCTGGGCATGTACCGCCTGACCGTGGATGGTGTGGAA  585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TAGTGGAGTGTCATGGCAACACGCTTTTGCCACAGTTCCTGGGCATGTACCGCCTGACCGTGGATGGTGTGGAA  666

Query  586  ACCTACATGGTGGTTACCAGGAACGTGTTCAGCCATCGGCTCACTGTGCATCGCAAGTATGACCTCAAGGGTTC  659
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACCTACATGGTGGTTACCAGGAACGTGTTCAGCCATCGGCTCACTGTGCATCGCAAGTATGACCTCAAGGGTTC  740

Query  660  TACGGTTGCCAGAGAAGCGAGCGACAAGGAGAAGGCCAAGGACTTGCCAACATTCAAAGACAATGACTTCCTCA  733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TACGGTTGCCAGAGAAGCGAGCGACAAGGAGAAGGCCAAGGACTTGCCAACATTCAAAGACAATGACTTCCTCA  814

Query  734  ATGAAGGGCAGAAGCTGCATGTGGGAGAGGAGAGTAAAAAGAACTTCCTGGAGAAACTGAAGCGGGACGTTGAG  807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGAAGGGCAGAAGCTGCATGTGGGAGAGGAGAGTAAAAAGAACTTCCTGGAGAAACTGAAGCGGGACGTTGAG  888

Query  808  GAGATTCT----------------------------CGTTCTG-------TCC----------CCAG-----GC  831
                ||||                            |.|.|||       |||          ||.|     ||
Sbjct  889  ----TTCTTGGCACAGCTGAAGATCATGGACTACAGCCTGCTGGTGGGCATCCACGACGTGGACCGGGCAGAGC  958

Query  832  AGGAGAATCGCT--------------------------------------------------------------  843
            |||||.|  |.|                                                              
Sbjct  959  AGGAGGA--GATGGAGGTGGAGGAGCGGGCAGAGGACGAGGAGTGTGAGAATGATGGGGTGGGTGGCAACCTAC  1030

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1031  TCTGCTCCTATGGCACACCTCCGGACAGCCCTGGCAACCTCCTCAGCTTTCCTCGGTTCTTTGGTCCTGGGGAA  1104

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1105  TTCGACCCCTCTGTTGACGTCTATGCCATGAAAAGCCATGAAAGTTCCCCCAAGAAGGAGGTGTATTTCATGGC  1178

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1179  CATCATTGATATCCTCACGCCATACGATACAAAGAAGAAAGCTGCACATGCTGCCAAAACGGTGAAACACGGGG  1252

Query  844  --------------------------------------------------------------------------  843
                                                                                      
Sbjct 1253  CAGGGGCCGAGATCTCGACTGTGAACCCTGAGCAGTACTCCAAACGCTTCAACGAGTTTATGTCCAACATCCTG  1326

Query  844  ---  843
               
Sbjct 1327  ACG  1329