Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11275
- Subject:
- XM_017002555.2
- Aligned Length:
- 3515
- Identities:
- 1978
- Gaps:
- 1516
Alignment
Query 1 ATGGAAGAAGTTAGGTGTCCAGAGCACGGGACTTTCTGCTTTCTTAAGACCGGCGTCCGCGATGGCCCGAATAA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAAGAAGTTAGGTGTCCAGAGCACGGGACTTTCTGCTTTCTTAAGACCGGCGTCCGCGATGGCCCGAATAA 74
Query 75 AGGAAAGAGCTTCTACGTGTGCCGGGCAGACACGTGCAGCTTCGTGCGGGCCACCGACATTCCTGTTTCCCATT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGGAAAGAGCTTCTACGTGTGCCGGGCAGACACGTGCAGCTTCGTGCGGGCCACCGACATTCCTGTTTCCCATT 148
Query 149 GCTTATTGCATGAGGACTTTGTGGTAGAGCTTCAGGGTTTGCTTCTGCCACAGGACAAGAAAGAATACAGATTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCTTATTGCATGAGGACTTTGTGGTAGAGCTTCAGGGTTTGCTTCTGCCACAGGACAAGAAAGAATACAGATTG 222
Query 223 TTCTTCCGATGCATTAGAAGTAAGGCAGAGGGGAAACGCTGGTGTGGAAGTATTCCATGGCAGGATCCTGATTC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTCTTCCGATGCATTAGAAGTAAGGCAGAGGGGAAACGCTGGTGTGGAAGTATTCCATGGCAGGATCCTGATTC 296
Query 297 CAAAGAACATTCTGTATCCAATAAGTCTCAGCATGCATCTGAGACATTTCATCATTCTTCCAACTGGCTGAGAA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAAAGAACATTCTGTATCCAATAAGTCTCAGCATGCATCTGAGACATTTCATCATTCTTCCAACTGGCTGAGAA 370
Query 371 ATCCATTCAAGGTACTTGACAAGAATCAAGAACCAGCTCTCTGGAAACAGCTCATCAAAGGTGAAGGTGAGGAA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATCCATTCAAGGTACTTGACAAGAATCAAGAACCAGCTCTCTGGAAACAGCTCATCAAAGGTGAAGGTGAGGAA 444
Query 445 AAGAAGGCTGATAAGAAGCAAAGAGAAAAGGGAGATCAGCTTTTCGATCAAAAGAAAGAACAGAAGCCTGAAAT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGAAGGCTGATAAGAAGCAAAGAGAAAAGGGAGATCAGCTTTTCGATCAAAAGAAAGAACAGAAGCCTGAAAT 518
Query 519 GATGGAGAAAGACCTCTCATCTGGCCTGGTACCAAAGAAAAAACAATCTGTAGTTCAAGAGAAGAAGCAAGAAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATGGAGAAAGACCTCTCATCTGGCCTGGTACCAAAGAAAAAACAATCTGTAGTTCAAGAGAAGAAGCAAGAAG 592
Query 593 AGGGAGCAGAGATTCAGTGTGAGGCAGAGACTGGAGGCACACACAAAAGAGACTTTTCTGAAATTAAATCTCAA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGGAGCAGAGATTCAGTGTGAGGCAGAGACTGGAGGCACACACAAAAGAGACTTTTCTGAAATTAAATCTCAA 666
Query 667 CAGTGCCAAGGTAATGAGCTTACAAGACCATCTGCATCTTCTCAGGAGAAATCAAGTGGTAAGAGTCAAGATGT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGTGCCAAGGTAATGAGCTTACAAGACCATCTGCATCTTCTCAGGAGAAATCAAGTGGTAAGAGTCAAGATGT 740
Query 741 CCAAAGAGAATCAGAACCTCTGAGAGAAAAGGTTACCCAGCTTTTGCCTCAAAATGTTCACAGTCACAACTCAA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAAAGAGAATCAGAACCTCTGAGAGAAAAGGTTACCCAGCTTTTGCCTCAAAATGTTCACAGTCACAACTCAA 814
Query 815 TAAGCAAGCCCCAGAAAGGGGGACCCCTCAACAAGGAGTACACGAACTGGGAGGCTAAAGAAACAAAGGCAAAG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAAGCAAGCCCCAGAAAGGGGGACCCCTCAACAAGGAGTACACGAACTGGGAGGCTAAAGAAACAAAGGCAAAG 888
Query 889 GATGGCCCTAGCATACAGGCCACCCAGAAAAGCCTGCCTCAGGGGCATTTCCAAGAGCGGCCGGAGACCCACAG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GATGGCCCTAGCATACAGGCCACCCAGAAAAGCCTGCCTCAGGGGCATTTCCAAGAGCGGCCGGAGACCCACAG 962
Query 963 TGTGCCTGCTCCTGGAGGACCAGCGGCTCAGGCTGCACCAGCAGCACCAGGGCTTTCCCTGGGTGAGGGCCGTG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGTGCCTGCTCCTGGAGGACCAGCGGCTCAGGCTGCACCAGCAGCACCAGGGCTTTCCCTGGGTGAGGGCCGTG 1036
Query 1037 AAGCTGCCACAAGCAGTGACGACGAGGAGGAAGATGATGTTGTTTTTGTTTCCTCTAAGCCTGGGAGCCCCCTA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAGCTGCCACAAGCAGTGACGACGAGGAGGAAGATGATGTTGTTTTTGTTTCCTCTAAGCCTGGGAGCCCCCTA 1110
Query 1111 CTCTTTGACTCGACTCTGGACTTAGAGACGAAGGAAAACCTCCAATTCCCTGATCGAAGTGTGCAAAGAAAGGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTCTTTGACTCGACTCTGGACTTAGAGACGAAGGAAAACCTCCAATTCCCTGATCGAAGTGTGCAAAGAAAGGT 1184
Query 1185 GTCTCCTGCCTCAGGTGTTTCCAAGAAGGTAGAACCCTCAGACCCAGTAGCCCGGCGTGTCTACCTTACAACAC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTCTCCTGCCTCAGGTGTTTCCAAGAAGGTAGAACCCTCAGACCCAGTAGCCCGGCGTGTCTACCTTACAACAC 1258
Query 1259 AACTGAAACAAAAGAAGAGCACACTGGCATCAGTGAACATCCAGGCTCTTCCAGACAAGGGTCAGAAGTTGATC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AACTGAAACAAAAGAAGAGCACACTGGCATCAGTGAACATCCAGGCTCTTCCAGACAAGGGTCAGAAGTTGATC 1332
Query 1333 AAACAAATCCAGGAGCTGGAGGAAGTACTCAGTGGTCTTACCCTTTCCCCAGAGCAAGGAACTAATGAGAAGAG 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAACAAATCCAGGAGCTGGAGGAAGTACTCAGTGGTCTTACCCTTTCCCCAGAGCAAGGAACTAATGAGAAGAG 1406
Query 1407 TAACAGTCAAGTACCACAGCAGAGTCACTTCACCAAAACTACCACTGGCCCTCCCCACCTGGTGCCTCCCCAAC 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TAACAGTCAAGTACCACAGCAGAGTCACTTCACCAAAACTACCACTGGCCCTCCCCACCTGGTGCCTCCCCAAC 1480
Query 1481 CCCTTCCTCGTCGTGGTACCCAACCTGTGGGTTCTCTAGAACTAAAGTCTGCCTGCCAGGTGACTGCTGGAGGA 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCCTTCCTCGTCGTGGTACCCAACCTGTGGGTTCTCTAGAACTAAAGTCTGCCTGCCAGGTGACTGCTGGAGGA 1554
Query 1555 TCCAGTCAGTGCTATCGAGGCCATACAAACCAAGATCACGTTCATGCAGTGTGGAAAATCACAAGTGAAGCCAT 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TCCAGTCAGTGCTATCGAGGCCATACAAACCAAGATCACGTTCATGCAGTGTGGAAAATCACAAGTGAAGCCAT 1628
Query 1629 CGGTCAACTGCATCGCTCACTTGAGTCATGTCCTGGTGAGACGGTTGTGGCAGAAGATCCCGCCGGGCTGAAGG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CGGTCAACTGCATCGCTCACTTGAGTCATGTCCTGGTGAGACGGTTGTGGCAGAAGATCCCGCCGGGCTGAAGG 1702
Query 1703 TCCCTTTGCTACTACACCAGAAGCAGGCATTGGCTTGGTTACTATGGCGAGAAAGTCAGAAGCCACAAGGAGGA 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCCCTTTGCTACTACACCAGAAGCAGGCATTGGCTTGGTTACTATGGCGAGAAAGTCAGAAGCCACAAGGAGGA 1776
Query 1777 ATTCTGGCAGATGATATGGGCTTAGGAAAAACCCTGACAATGATTGCGCTCATCCTGACCCAGAAGAATCAAGA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATTCTGGCAGATGATATGGGCTTAGGAAAAACCCTGACAATGATTGCGCTCATCCTGACCCAGAAGAATCAAGA 1850
Query 1851 GAAAAAGGAAGAAAAGGAGAAAAGCACAGCTTTGACGTGGCTCTCCAAAGATGGTAGACAGAAGTGCCTTAA-- 1922
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||....|||.|||.|
Sbjct 1851 GAAAAAGGAAGAAAAGGAGAAAAGCACAGCTTTGACGTGGCTCTCCAAAGAT----GACTCTTGTGACTTTACT 1920
Query 1923 ---------------------TAGCCTGCCATTCCC---TACGTCATTTGAGCCACCCAA---GAGG----GGA 1965
|..|||||| |||| |.|.|||||.|| || |||| |.|
Sbjct 1921 TCCCATGGAACACTAATCATCTGTCCTGCC--TCCCTGATCCATCATTGGA-------AAAATGAGGTGGAGAA 1985
Query 1966 AC--GTCTTCAGCTAAAAA--AGGACACCTTTGGTCATATTTAATTACTCTAC--TGG--AAAACCAGTAT--- 2028
|| ||...||||.|.||| |.|| ||| ||| |||||| ||| .|||||.|.||
Sbjct 1986 ACGGGTGAACAGCAACAAACTAAGA--------GTC-TAT-------CTCTACCATGGGCCAAACCGGGATTCA 2043
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2044 CGTGCCAGAGTCCTCTCTACATATGACATCGTGATCACTACCTATAGCCTCGTGGCCAAGGAGATTCCCACAAA 2117
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2118 CAAGCAAGAGGCAGAGATCCCAGGTGCAAACCTCAATGTGGAGGGCACCTCAACACCTTTGCTTCGAATAGCCT 2191
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2192 GGGCTCGAATCATATTGGATGAAGCTCACAATGTTAAGAATCCCCGAGTGCAGACTTCCATAGCTGTGTGTAAG 2265
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2266 CTACAAGCCTGTGCCCGTTGGGCTGTCACTGGAACCCCCATTCAAAACAACTTATTGGATATGTATTCGCTGCT 2339
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2340 GAAGTTTCTCCGTTGCTCTCCATTTGATGAGTTCAATCTGTGGAGGAGTCAGGTTGACAATGGCTCAAAGAAAG 2413
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2414 GAGGAGAACGGTTAAGTATTTTAACCAAGAGCCTTTTGCTGAGGAGAACAAAAGACCAGCTGGACTCTACTGGC 2487
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2488 AGACCTTTGGTGATACTGCCCCAGCGTAAATTTCAGTTGCACCATTTAAAGCTTTCTGAAGATGAAGAGACTGT 2561
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2562 TTACAATGTGTTTTTTGCAAGATCAAGGTCAGCTCTGCAATCCTATCTAAAAAGACATGAAAGTAGAGGCAACC 2635
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2636 AATCTGGAAGAAGCCCTAATAATCCATTCAGTAGAGTGGCACTGGAGTTTGGGTCTGAGGAGCCTAGACACTCG 2709
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2710 GAGGCAGCAGACTCACCGAGATCCAGCACCGTCCACATACTGTCCCAGTTGCTGAGACTCCGCCAGTGTTGCTG 2783
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2784 TCATCTTTCTTTACTGAAGTCGGCCCTGGATCCAATGGAACTGAAGGGTGAAGGTCTTGTCCTTTCCCTGGAAG 2857
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2858 AACAGCTCAGTGCTTTGACCTTGTCAGAACTCCGTGACTCAGAGCCATCTTCCACTGTTTCCCTTAACGGCACC 2931
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 2932 TTCTTCAAGATGGAGCTTTTTGAAGGCATGCGAGAGAGCACCAAGATTTCATCTCTGTTGGCAGAATTGGAGGC 3005
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 3006 AATTCAAAGAAATTCAGCATCCCAAAAGAGTGTCATTGTCTCTCAGTGGACCAACATGCTGAAAGTTGTAGCAT 3079
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 3080 TGCACCTGAAGAAGCATGGACTGACTTATGCCACCATCGATGGCTCTGTCAATCCCAAGCAGAGAATGGACTTG 3153
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 3154 GTAGAGGCATTTAACCACTCCAGAGGCCCTCAGGTAATGCTAATCTCTCTCTTGGCCGGAGGTGTTGGTCTAAA 3227
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 3228 CCTGACTGGAGGAAATCACCTCTTTCTTTTGGACATGCACTGGAATCCATCACTTGAAGATCAAGCTTGTGACC 3301
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 3302 GAATTTACCGAGTAGGGCAGCAGAAAGATGTTGTCATACACAGATTTGTTTGTGAGGGAACAGTAGAAGAAAAG 3375
Query 2029 -------------------------------------------------------------------------- 2028
Sbjct 3376 ATCTTACAGCTCCAAGAAAAAAAGAAAGATTTGGCCAAACAAGTTCTATCAGGGTCTGGAGAATCTGTCACCAA 3449
Query 2029 ------------------------------------- 2028
Sbjct 3450 GCTCACCTTGGCTGACCTCAGAGTCCTTTTTGGCATC 3486
