Protein Global Alignment

Description

• Query: ccsbBroad304_11286
• Subject: NM_001042617.1
• Aligned Length: 1355
• Identities: 771
• Gaps: 579

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  MLDPSSSEEESDEILEEERGKDVLGSAASGARLSPSRTSEGSAGSAGMGGSGAGAGVGAGGGGGSGASSGGGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GLQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKKRLQLYVFVMRCIAYPFNAKQPTDMARRQQKISK  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  QQLQTVKDRFQAFLNGETQIVADEAFMNAVQSYYEVFLKSDRVARMVQSGGCSANDSREVFKKHIEKRVRSLPE  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  IDGLSKETVLSSWMAKFDAIYRGEEDPRKQQARMTASAASELILSKEQLYEMFQNILGIKKFEHQLLYNACQLD  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  NPDEQAAQIRRELDGRLQMADQIARERKFPKFVSKEMENMYIEELKSSVNLLMANLESMPVSKGGEFKLQKLKR  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  SHNASIIDMGEESENQLSKSDVLLSFSLEVVIMEVQGLKSLAPNRIVYCTMEVEGGEKLQTDQAEASKPTWGTQ  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GDFSTTHALPAVKVKLFTESTGVLALEDKELGRVILHPTPNSPKQSEWHKMTVSKNCPDQDLKIKLAVRMDKPQ  518

Query    1  -MKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFN  73
             ||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  NMKHSGYLWTIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFN  592

Query   74  AVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFY----ADRAQKHG  143
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.    ||||||||
Sbjct  593  AVKEGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQVQKLNAKGGNVPQLDAPISQFSGLKDADRAQKHG  666

Query  144  MDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERA  217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  MDEFISSNPCNFDHASLFEMVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARNGVRGCHRHLCYLRDLLERA  740

Query  218  ENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKA  291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ENGAMIDPTLLHYSFAFCASHVHGNRPDGIGTVTVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKA  814

Query  292  TLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEENQKDAENVGRLITPAKKLEDTIRLA  365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TLSLLERVLMKDIVTPVPQEEVKTVIRKCLEQAALVNYSRLSEYAKIEENQKDAENVGRLITPAKKLEDTIRLA  888

Query  366  ELVIEVLQQNEEHHA-------EAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRT  432
            |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ELVIEVLQQNEEHHAEPHVDKGEAFAWWSDLMVEHAETFLSLFAVDMDAALEVQPPDTWDSFPLFQLLNDFLRT  962

Query  433  DYNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPV--------------------------  480
            ||||||||||||||||||||||||||||||||||||||||||||||||                          
Sbjct  963  DYNLCNGKFHKHLQDLFAPLVVRYVDLMESSIAQSIHRGFERESWEPVKSLTSNLPNVNLPNVNLPKVPNLPVN  1036

Query  481  -----------------------NNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCV  531
                                   .||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  IPLGIPQMPTFSAPSWMAAIYDADNGSGTSEDLFWKLDALQTFIRDLHWPEEEFGKHLEQRLKLMASDMIESCV  1110

Query  532  KRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLV  605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  KRTRIAFEVKLQKTSRSTDFRVPQSICTMFNVMVDAKAQSTKLCSMEMGQEHQYHSKIDELIEETVKEMITLLV  1184

Query  606  AKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNGEMYIER  679
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1185  AKFVTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVDVPKPGMDVADAYVTFVRHSQDVLRDKVNEEMYIER  1258

Query  680  LFDQWYNSSMNVICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATAS  753
            |||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  LFDQWYNSSMNIICTWLTDRMDLQLHIYQLKTLIRMVKKTYRDFRLQGVLDSTLNSKTYETIRNRLTVEEATAS  1332

Query  754  VSEGGGLQGISMKDSDEEDEEDD  776
            |||||||||||||||||||||||
Sbjct 1333  VSEGGGLQGISMKDSDEEDEEDD  1355