Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11286
- Subject:
- XM_006518026.3
- Aligned Length:
- 4131
- Identities:
- 2128
- Gaps:
- 1803
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGTGGCGCCGGGGCCGGGGTGGGCGCCGGCGGCGGTGGGGGTAGCGGCGCGAGCAGCGGCGGCGGGGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCTGCAGCCCAGCAGCCGCGCCGGCGGCGGCCGGCCTTCCAGCCCTAGCCCGTCGGTGGTGAGCGAGAAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAAGAGTTGGAGAGGCTGCAGAAGGAGGAGGAAGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTATGAATGCTGTCCAGAGCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGGCCCGCATGGTGCAGAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAACGCAAATTTCCTAAGTTCGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCCTTAAGTCCTTGGCTCCAAATCGAATTGTATACTGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAATGGAGGTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAACTATTCACAGAGAGCACTGGTGTCCTGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGACAGTCTCCAAAAACTGCCCCGATCAAGACCTCAAAATCAAACTTGCTGTCCGAATGGATAAGCCTCAA 1554
Query 1 ---ATGAAGCATTCTGGGTATTTATGGGCCATCGGTAAGAATGTCTGGAAGAGATGGAAGAAAAGGTTTTTTGT 71
||||||||.||||||||.||||||.||||.|||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 1555 AACATGAAGCACTCTGGGTACTTATGGACCATTGGTAAGAATGTGTGGAAGAGGTGGAAGAAGAGGTTCTTTGT 1628
Query 72 ATTGGTGCAGGTCAGTCAGTACACGTTTGCCATGTGCAGTTATCGGGAGAAGAAAGCGGAGCCTCAGGAACTTC 145
.||||||||||||||.||||||||.||||||||||||||.|||||.||.|||||.||.||||||||||||||.|
Sbjct 1629 GTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAAAGAAGGCAGAGCCTCAGGAACTCC 1702
Query 146 TACAATTGGATGGCTACACTGTGGATTACACCGACCCCCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 219
||||..||||.||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 1703 TACAGCTGGACGGCTACACCGTGGATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 1776
Query 220 GCTGTCAAGGAGGGAGACACCGTGATATTTGCCAGTGACGATGAACAAGACCGCATCCTGTGGGTCCAGGCCAT 293
||.|||||.||.||||||||.|||||||||||.|||||.|||||||||||.||.||..||||||||||.||.||
Sbjct 1777 GCAGTCAAAGAAGGAGACACGGTGATATTTGCAAGTGATGATGAACAAGATCGAATTTTGTGGGTCCAAGCTAT 1850
Query 294 GTATCGGGCCACGGGGCAGTCACACAAGCCTGTGCCCCCGACCCAAGTCCAGAAACTCAACGCCAAGGGAGGAA 367
|||..|||||||.||.|||||.|||||.|||||.|||||.|||||.||.|||||.||||||||||||||.||||
Sbjct 1851 GTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAA 1924
Query 368 ATGTACCTCAGCTGGATGCCCCTATCTCTCAATTTTACGCAGATAGAGCTCAAAAACATGGCATGGATGAATTT 441
||||.|||||||||||||||||.|||||.|||||||||||||||||||||||.||.||||||||||||||||||
Sbjct 1925 ATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTACGCAGATAGAGCTCAGAAGCATGGCATGGATGAATTT 1998
Query 442 ATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTACAACGCCTTACTTTGGATCACAG 515
||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||||||||||||||
Sbjct 1999 ATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGACTTTGGATCACAG 2072
Query 516 ACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTACTAGACGAGTATTGCGCCC 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||.||||||||||||.
Sbjct 2073 ACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTGTTAGATGAGTATTGCGCCA 2146
Query 590 GAAATGGAGTCCGGGGGTGTCACCGACATCTCTGCTACCTCAGAGACTTGCTTGAACGGGCAGAAAATGGCGCC 663
|||||||||||||.||.||||||||.||||||||||||||.|||||||||||.|||||.||||||||||||||.
Sbjct 2147 GAAATGGAGTCCGAGGATGTCACCGGCATCTCTGCTACCTTAGAGACTTGCTGGAACGAGCAGAAAATGGCGCG 2220
Query 664 ATGATCGACCCCACCCTTCTTCACTACAGCTTTGCCTTCTGTGCATCCCATGTCCATGGGAACAGGCCTGATGG 737
|||||.||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||
Sbjct 2221 ATGATTGACCCCACGCTTCTTCACTACAGCTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAGGCCTGATGG 2294
Query 738 AATTGGAACTGTGACTGTTGAAGAAAAGGAACGTTTTGAAGAAATCAAAGAGAGGCTCCGAGTTCTGCTAGAAA 811
|||.|||||||||||||||||||||||.|||||.||||||||||||||||||||.||||||||||||||.||||
Sbjct 2295 AATCGGAACTGTGACTGTTGAAGAAAAAGAACGCTTTGAAGAAATCAAAGAGAGACTCCGAGTTCTGCTGGAAA 2368
Query 812 ATCAGATTACACATTTTAGGTATTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCTACTCTCTCACTC 885
||||.|||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATCAAATTACACATTTCAGGTACTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCTACTCTCTCACTC 2442
Query 886 TTGGAAAGGGTTTTGATGAAAGATATTGTTACCCCAGTGCCACAAGAGGAGGTAAAAACAGTTATCCGTAAATG 959
||||||.||||||||||||||||||||||.||.|||||.||||||||.|||||.|||||.||.|||||||||||
Sbjct 2443 TTGGAACGGGTTTTGATGAAAGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAAATG 2516
Query 960 TCTGGAACAGGCTGCGTTAGTCAACTATTCTCGGCTCTCAGAGTATGCCAAAATCGAAG--------------- 1018
.||.||.||||||||..||||||||||.||.||.||.||.||||||||||||||.||||
Sbjct 2517 CCTAGAGCAGGCTGCTCTAGTCAACTACTCACGCCTATCTGAGTATGCCAAAATTGAAGGGAAAAAGAGAGAAA 2590
Query 1019 ------------------------------------------------------AGAATCAAAAGGATGCAGAA 1038
||||||||||||||||||||
Sbjct 2591 TGTATGAGCATCCTGTCTTCTGCTTGGCCTCCCAAGTGATGGATTTAACCATTCAGAATCAAAAGGATGCAGAA 2664
Query 1039 AATGTAGGCCGGTTAATCACTCCTGCCAAAAAGCTTGAAGATACAATACGTCTTGCTGAACTAGTCATTGAAGT 1112
|||||||||||.|||||||||||.|||||||||||.|||||.|||||.||||||||||||||||||||.|||||
Sbjct 2665 AATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGTCATCGAAGT 2738
Query 1113 TCTTCAGCAAAATGAGGAGCACCACGC------------------------------AGAGGCCTTTGCGTGGT 1156
.||.||.|||||.|||||||||||||| |||.|||||||||||||
Sbjct 2739 ACTGCAACAAAACGAGGAGCACCACGCCGAGGGGAAAGAGCCACATGTTGATAAAGGAGAAGCCTTTGCGTGGT 2812
Query 1157 GGTCAGATTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTAGACATGGATGCAGCCTTAGAG 1230
|||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 2813 GGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGCCTTAGAG 2886
Query 1231 GTGCAACCTCCAGACACATGGGACAGTTTTCCACTATTTCAGCTGCTGAATGATTTTCTCCGTACTGACTATAA 1304
||||||||.||||||||.|||||||||||.|||||.||.||||||||||||||.|||||||||||.||||||||
Sbjct 2887 GTGCAACCCCCAGACACGTGGGACAGTTTCCCACTCTTCCAGCTGCTGAATGACTTTCTCCGTACAGACTATAA 2960
Query 1305 TTTGTGCAATGGAAAATTTCACAAACACCTGCAAGACCTGTTTGCCCCACTTGTTGTTAGATATGTGGATCTGA 1378
|||||||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||
Sbjct 2961 TTTGTGCAATGGAAAGTTTCACAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGA 3034
Query 1379 TGGAGTCCTCAATTGCACAATCCATTCACAGGGGCTTTGAGCGGGAGTCATGGGAACCAGTCA----------- 1441
||||||||||.|||||||||||.||.|||||||||||||||||||||||||||||.|||||||
Sbjct 3035 TGGAGTCCTCCATTGCACAATCTATCCACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAGAGTTTAACC 3108
Query 1442 -------------------------------------------------------------------------- 1441
Sbjct 3109 AGTAACCTACCCAATGTGAACCTACCCAATGTGAACCTACCCAAAGTACCAAATCTACCAGTTAACATCCCTCT 3182
Query 1442 --------------------------------------------------------------ATAATGGGTCAG 1453
|||||||.||||
Sbjct 3183 AGGCATCCCACAGATGCCCACTTTTTCGGCACCGTCATGGATGGCTGCTATATATGATGCTGATAATGGATCAG 3256
Query 1454 GCACCTCAGAAGATCTGTTTTGGAAACTTGACGCCCTTCAGACCTTCATTCGGGACCTGCACTGGCCTGAAGAA 1527
|.||.|||||||||.||||.|||||||||||.|||||||||||.|||||.||.|||||.|||||||||||.|||
Sbjct 3257 GTACATCAGAAGATTTGTTCTGGAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAA 3330
Query 1528 GAGTTTGGAAAGCACCTGGAACAACGGCTGAAGTTGATGGCAAGTGACATGATCGAATCTTGTGTCAAAAGAAC 1601
|||||||||||.|||.|.||.||.|||||.||..|||||||||||||||||||.||.||.||.|||||||||||
Sbjct 3331 GAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTCAAAAGAAC 3404
Query 1602 CAGGATTGCATTTGAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCA 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 CAGGATTGCATTTGAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCA 3478
Query 1676 CCATGTTTAATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCAT 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 CCATGTTTAATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGCAT 3552
Query 1750 CAATACCATTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACTCTTGGTTGCAAAGTT 1823
||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||.|||||.||||||||
Sbjct 3553 CAATACCATTCAAAAATAGATGAACTAATTGAAGAAACCGTTAAAGAAATGATCACACTTTTGGTGGCAAAGTT 3626
Query 1824 CGTTACTATCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGTTTTCTTCTTTTCTGT 1897
.||.|||||.||||||||.||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 3627 TGTAACTATATTGGAAGGCGTACTGGCAAAGTTATCCAGATATGACGAGGGGACTTTGTTTTCTTCGTTTCTGT 3700
Query 1898 CATTTACCGTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTGGCCGACGCCTACGTG 1971
||||.||.|||||||||||||||||.||||||||.||.||||||||||||||||||||||||||||||||||||
Sbjct 3701 CATTCACGGTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTGGCCGACGCCTACGTG 3774
Query 1972 ACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAATGGGGAGATGTACATAGAAAGGTTATTTGA 2045
|||||||||||||||||||||||||||||.||||||||||||||||.|||||||||.|||||||||||||||||
Sbjct 3775 ACTTTCGTCCGCCATTCTCAGGATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATATAGAAAGGTTATTTGA 3848
Query 2046 TCAATGGTACAACAGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACTTACAGCTTCATATTT 2119
|||||||||||||||||||||||||.|.||||||||.|||.||||.|||.||||||||.|.|||||.||.||||
Sbjct 3849 TCAATGGTACAACAGCTCCATGAACATCATCTGCACGTGGCTGACCGACAGGATGGACCTGCAGCTCCACATTT 3922
Query 2120 ATCAGTTGAAAACACTAATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAAGGGGTCCTGGACTCC 2193
|.|||.|||||||.||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||.|||
Sbjct 3923 ACCAGCTGAAAACCCTGATCAGGATGGTAAAGAAAACCTATAGAGATTTCCGATTGCAAGGGGTCCTGGATTCC 3996
Query 2194 ACCTTAAACAGCAAGACCTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCACAGCATCAGTGAGTGA 2267
|||||||||||||||||||||||.||.|||||.|||||||||||||||||||||||.|||||.|||||||||||
Sbjct 3997 ACCTTAAACAGCAAGACCTATGAGACCATCCGAAACCGTCTCACTGTGGAGGAAGCTACAGCGTCAGTGAGTGA 4070
Query 2268 AGGTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACGAT 2328
.||||||||..|.||.||.|||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 4071 GGGTGGGGGCTTACAAGGTATCAGCATGAAGGACAGTGATGAGGAAGATGAAGAAGATGAT 4131
