Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11288
- Subject:
- XM_011244344.3
- Aligned Length:
- 2739
- Identities:
- 901
- Gaps:
- 1767
Alignment
Query 1 ATGCTGCCTGAAGATAAAGAAGCTGATAGCTTACGAGGAAATATTTCAGTAAAAGCAGTTAAAAAAGAAGTAGA 74
||||||||||||||||||||.||||||||||||.||||.||.|||||.||.|||||||||||||||||||||||
Sbjct 1 ATGCTGCCTGAAGATAAAGATGCTGATAGCTTAAGAGGCAACATTTCTGTCAAAGCAGTTAAAAAAGAAGTAGA 74
Query 75 AAAGAAACTCCGATGTCTTCTTGCTGATTTACCGCTGCCCCCTGAGCTACCAGGAGGAGATGATCTTTCAAAGA 148
||||||||||||||||||.||||||||||||||..|||||||||||.||||||||||||||||||||||.||||
Sbjct 75 AAAGAAACTCCGATGTCTGCTTGCTGATTTACCATTGCCCCCTGAGTTACCAGGAGGAGATGATCTTTCCAAGA 148
Query 149 GTCCAGAGGAAAAGAAAACAGCAACACAGTTACATAGTAAAAGGAGGCCTAAAATATGTGGGCCTCGCTATGGT 222
||||||||||.||||||||||||.|||||||||||||.|||.|.||||||||||||||||||||||||||||||
Sbjct 149 GTCCAGAGGAGAAGAAAACAGCAGCACAGTTACATAGCAAACGAAGGCCTAAAATATGTGGGCCTCGCTATGGT 222
Query 223 GAAACCAAAGAAAAAGATATTGACTGGGGAAAACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGA 296
||||.||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAAATCAAAGAAAAAGATATTGACTGGGGGAAACGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGA 296
Query 297 AGGTACTTACGGACAAGTTTACAAAGCCAGGGATAAAGACACTGGAGAAATGGTAGCCTTAAAAAAAGTACGTC 370
|||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||||||||.||||||||||
Sbjct 297 AGGTACTTATGGACAAGTTTACAAAGCCAGGGACAAAGACACGGGAGAAATGGTAGCCTTAAAGAAAGTACGTC 370
Query 371 TGGATAATGAAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGCTTACCCATCAG 444
||||||||||||||||.||.||.|||||||||||||||.||||||||||||||||.|||||.||.|||||.|||
Sbjct 371 TGGATAATGAAAAGGAGGGTTTCCCAATTACAGCAATTAGAGAAATTAAAATTCTTCGGCAACTCACCCACCAG 444
Query 445 AGTATTATCAATATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGGATTTCAAGAAGGACAAAGGTGCATT 518
|||||.|||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||||||||||
Sbjct 445 AGTATCATCAATATGAAGGAAATCGTGACTGATAAAGAAGATGCTTTGGATTTTAAGAAAGACAAAGGTGCATT 518
Query 519 TTATCTGGTGTTTGAATATATGGACCATGATCTGATGGGACTACTGGAATCAGGCTTGGTTCATTTTAATGAAA 592
|||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 519 TTACCTGGTGTTTGAATATATGGACCATGATCTGATGGGACTGCTGGAATCAGGCTTGGTTCATTTTAATGAAA 592
Query 593 ATCACATAAAGTCATTTATGAGACAGCTCATGGAGGGTCTGGATTATTGTCATAAGAAGAACTTTTTGCATAGA 666
|.||.|||||.||.||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||
Sbjct 593 ACCATATAAAATCTTTTATGAGACAGCTCATGGAAGGCCTGGATTATTGTCATAAGAAGAACTTTTTGCATAGA 666
Query 667 GATATTAAATGTTCCAATATCCTTCTAAATAATAGAGGGCAGATAAAACTTGCAGACTTTGGACTTGCTCGATT 740
||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.||
Sbjct 667 GATATTAAATGTTCAAATATCCTTCTAAATAATAGAGGACAGATAAAACTTGCAGATTTTGGACTTGCTCGTTT 740
Query 741 GTATAGCTCAGAAGAAAGTCGGCCGTATACTAACAAGGTAATTACTTTATGGTACCGTCCACCTGAACTGCTAC 814
.||||||||||||||||||||.||.||||||||||||||.||||||||.|||||.||||||||||||.||||..
Sbjct 741 ATATAGCTCAGAAGAAAGTCGCCCATATACTAACAAGGTCATTACTTTGTGGTATCGTCCACCTGAATTGCTCT 814
Query 815 TGGGAGAAGAACGATACACACCAGCCATTGATGTATGGAGCTGTGGCTGTATCCTTGGCGAACTCTTCACTAAA 888
||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||
Sbjct 815 TGGGAGAAGAACGATATACACCAGCCATTGATGTATGGAGCTGTGGATGTATCCTTGGTGAACTCTTCACTAAA 888
Query 889 AAACCTATATTTCAAGCAAATCAGGAACTTGCACAACTAGAATTAATAAG----ACATGAAGAA--------AA 950
||||||||||||||||||||.||||||||||||||.|||||..||||||| |.|||..|.| ..
Sbjct 889 AAACCTATATTTCAAGCAAACCAGGAACTTGCACAGCTAGAGCTAATAAGCCGTATATGTGGGAGTCCATGTCC 962
Query 951 TGAAGTTT---CTGA--TAAACAAA----------TC------------------------------------- 972
||.|||.| |||| |||.|||| ||
Sbjct 963 TGCAGTGTGGCCTGATGTAATCAAACTGCCATATTTCAACACCATGAAACCAAAGAAGCAATATCGGCGGAAGT 1036
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1037 TAAGAGAAGAATTTGTTTTCATCCCCGCAGCTGCACTCGACTTATTCGATTACATGCTTGCCTTGGATCCCAGT 1110
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1111 AAGCGCTGCACTGCTGAGCAGGCTCTTCAGTGTGAGTTCCTGCGAGACGTGGAACCCTCCAAAATGCCTCCACC 1184
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1185 AGAGAGGTTTTTACACGCTGAGGCAATGCACCATAGTAAGATGGCTGAGAGCCTTCCTTTGTGGCAAGATTGTC 1258
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1259 ATGAATTATGGAGTAAAAAGAGAAGAAGACAGAAACAGATGGGCATGACTGATGATCTTTCCACAATCAAAGCC 1332
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1333 CCTAGGAAGGACCTGTCTCTGGGCTTAGATGACAGCAGAACTAACACACCCCAGGGTGTGCTGCCACCCGCACA 1406
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1407 GTTGAAATCTCAGAGCAACTCAAATGTAGCACCTGTAATAACAGGCCCTGGACAGCCGTTAAACCACAGTGAAT 1480
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1481 TGGCAATTCTTCTAAACCTACTACAATCTAAATCAAGTGTTAATATGGCTGATTTTGTCCAAGTGTTGAACATT 1554
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1555 AAGGTAAACTCTGAGACTCAACAGCAGCTAAATAAAATAAACCTTCCTGCTGGAATTTTGGCAACAGGTGAAAA 1628
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1629 ACAGACAGATCCATCAACACCACAACAGGAGTCTTCAAAATCATTGGGAGGAGTTCAGCCTTCACAGACCATCC 1702
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1703 AGCCTAAAGTGGAAACTGATGCTGCCCAGGCTGCTGTGCAGAGTGCATTTGCAGTCCTCTTGACTCAGTTAATA 1776
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1777 AAGGCCCAACAGTCCAAACAGAAAGATGCCATGCTAGAGGAAAGGGAAAATGGATCAGGACATGAAGCTCCATT 1850
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1851 GCAACTCAGGCCTCCTCTAGAACCGAGCACTCCTGGATCCGGGCAAGATGACCTCATCCAGCACCAAGACAGGA 1924
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1925 GGATATTGGAGCTGACACCAGAACCAGACCGGCCTCGAATTCTGCCTCCTGATCAACGGCCTCCTGAACCTCCT 1998
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1999 GAACCACCACCAGTTACTGAGGAGGACCTAGATTATCGGACAGAAAACCAGCATGTTCCTACCACTAGTTCTTC 2072
Query 973 -------------------------------------------------------------------------- 972
Sbjct 2073 ATTAACTGACCCACATGCTGGAGTGAAGGCAGCCCTCTTACAGCTGCTTGCTCAGCATCAGCCCCAGGATGATC 2146
Query 973 -------------------------------------------------------------------------- 972
Sbjct 2147 CCAAAAGAGAAGGTGGTATCGATTATCCCACAGGAGACACATATGTGCCCAGTTCAGACTATAAGGACAACTTT 2220
Query 973 -------------------------------------------------------------------------- 972
Sbjct 2221 GGATCTTCTTTCTCTGCCGCTCCTTACGTTAGCAGTGATGGTCTAGGAAGTAGCTCCGCTGCTGCACCATTGGA 2294
Query 973 -------------------------------------------------------------------------- 972
Sbjct 2295 AGCACGTAGTTTCATTGGAAACTCAGATATTCAGTCTCTGGATAACTACAGTACTGCTTCATCTCACACTGGTG 2368
Query 973 -------------------------------------------------------------------------- 972
Sbjct 2369 GTCCACCTCAAACTTCTGCCTTTACTGAGTCGTTTGCCAGTTCAGTAGCTGGATATGGAGACATTTACCTCAAT 2442
Query 973 -------------------------------------------------------------------------- 972
Sbjct 2443 GCTGGTCCCATGTTGTTTAGTGGAGACAAGGACCATAGATTTGAATATAGCCATGGTCCTATCACAGTCCTCAC 2516
Query 973 -------------------------------------------------------------------------- 972
Sbjct 2517 AAACAGCAATGACCCTTCCACAGGGCCAGAGAGTACTCATCCCTTGCCAGCAAAGATGCACAACTATAACTATG 2590
Query 973 -------------------------------------------------------------------------- 972
Sbjct 2591 GTGGTAACTTACAGGAAAATCCAGGTGGCCCTAGCCTCATGCATGGACAGACCTGGACTTCTCCTGCCCAAGGA 2664
Query 973 -------------------------------------------------------------------------- 972
Sbjct 2665 CCTGGATATTCACAAGGATACAGGGGACACATTAGCACATCAGCTGGCAGAGGTCGAGGCAGAGGGTTACCATA 2738
Query 973 - 972
Sbjct 2739 C 2739
