Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11311
- Subject:
- NM_001077403.1
- Aligned Length:
- 2794
- Identities:
- 266
- Gaps:
- 2498
Alignment
Query 1 ATGGATATGTTTCCTCTCACCTGGGTTTTCTTAGCCCTCTACTTTTCAAGACACCAAGTGAGAGGCCAACCAGA 74
|||||||||||||||||.|||||||||||||||||.||.|||||||||.|||||.||||||||.||||.|.|||
Sbjct 1 ATGGATATGTTTCCTCTTACCTGGGTTTTCTTAGCTCTGTACTTTTCAGGACACGAAGTGAGAAGCCAGCAAGA 74
Query 75 CCCACCGTGCGGAGGTCGTTTGAATTCCAAAGATGCTGGCTATATCACCTCTCCCGGTTACCCCCAGGACTACC 148
.|||||.|||||||||||..||||||||||||||||||||||.|||||.||.||.||.||||||||||||||.|
Sbjct 75 TCCACCCTGCGGAGGTCGGCTGAATTCCAAAGATGCTGGCTACATCACTTCCCCAGGCTACCCCCAGGACTATC 148
Query 149 CCTCCCACCAGAACTGCGAGTGGATTGTTTACGCCCCCGAACCCAACCAGAAGATTGTCCTCAACTTCAACCCT 222
||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 149 CCTCCCACCAGAACTGTGAGTGGATTGTCTACGCCCCCGAACCCAACCAGAAGATTGTTCTCAACTTCAACCCT 222
Query 223 CACTTTGAAATCGAGAAGCACGACTGCA------ACTT-------------------------------GCTG- 258
|||||||||||||||||.|||||||||| |||| ||||
Sbjct 223 CACTTTGAAATCGAGAAACACGACTGCAAGTATGACTTCATTGAGATTCGGGATGGGGACAGTGAGTCAGCTGA 296
Query 259 TCTGCTTGGAAA-------------------------------ATTTCACTCA-----------------CAAG 284
.||.||.||.|| ||.|| |||| ||||
Sbjct 297 CCTCCTGGGCAAGCACTGTGGGAACATCGCCCCGCCCACCATCATCTC-CTCAGGCTCCGTGTTATACATCAAG 369
Query 285 ----CCGCAG-CTTTGCC-------------------------------------------------------- 297
||.||| ||..|||
Sbjct 370 TTCACCTCAGACTACGCCCGGCAGGGGGCAGGTTTCTCTCTACGCTATGAGATCTTCAAAACAGGCTCTGAAGA 443
Query 298 -------------------------------------------------------------------------- 297
Sbjct 444 TTGTTCCAAGAACTTTACAAGCCCCAATGGGACCATTGAATCTCCAGGGTTTCCAGAGAAGTATCCACACAATC 517
Query 298 -------------------------------------------------------------------------- 297
Sbjct 518 TGGACTGTACCTTCACCATCCTGGCCAAACCCAGGATGGAGATCATCCTACAGTTCCTGACCTTTGACCTGGAG 591
Query 298 -------------------------------------------------------------------------- 297
Sbjct 592 CATGACCCTCTACAAGTGGGGGAAGGAGACTGTAAATATGACTGGCTGGACATCTGGGATGGCATTCCACATGT 665
Query 298 -------------------------------------------------------------------------- 297
Sbjct 666 TGGACCTCTGATTGGCAAGTACTGTGGGACGAAAACACCCTCCAAACTCCGCTCGTCCACGGGGATCCTCTCCT 739
Query 298 -------------------------------------------------------------------------- 297
Sbjct 740 TGACCTTTCACACGGACATGGCAGTGGCCAAGGATGGCTTCTCCGCACGTTACTATTTGATCCACCAGGAGCCA 813
Query 298 -------------------------------------------------------------------------- 297
Sbjct 814 CCTGAGAATTTTCAGTGCAATGTCCCTTTGGGAATGGAGTCTGGCCGGATTGCTAATGAACAGATCAGTGCCTC 887
Query 298 -------------------------------------------------------------------------- 297
Sbjct 888 CTCCACCTTCTCTGATGGGAGGTGGACTCCTCAACAGAGCCGGCTCCATGGTGATGACAATGGCTGGACACCCA 961
Query 298 -------------------------------------------------------------------------- 297
Sbjct 962 ATTTGGATTCCAACAAGGAGTATCTCCAGGTGGACCTGCGCTTCCTAACCATGCTCACAGCCATTGCAACACAG 1035
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1036 GGAGCCATTTCCAGGGAAACCCAGAAAGGCTACTACGTCAAATCGTACAAGCTGGAAGTCAGCACAAATGGTGA 1109
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1110 AGATTGGATGGTCTACCGGCATGGCAAAAACCACAAGATATTCCAAGCGAACAATGATGCGACCGAGGTGGTGC 1183
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1184 TAAACAAGCTCCACATGCCACTGCTGACTCGGTTCATCAGGATCCGCCCGCAGACGTGGCATTTGGGCATTGCC 1257
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1258 CTTCGCCTGGAGCTCTTTGGCTGCCGGGTCACAGATGCACCCTGCTCCAACATGCTGGGGATGCTCTCGGGCCT 1331
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1332 CATTGCTGATACCCAGATCTCTGCCTCCTCCACCCGAGAGTACCTCTGGAGCCCCAGTGCTGCCCGCCTGGTTA 1405
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1406 GTAGCCGCTCTGGCTGGTTTCCTCGGAACCCTCAAGCCCAGCCAGGTGAAGAATGGCTTCAGGTAGACCTGGGG 1479
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1480 ACACCCAAGACAGTGAAAGGGGTCATCATCCAGGGAGCCCGAGGAGGAGACAGCATCACTGCCGTGGAAGCCAG 1553
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1554 GGCGTTTGTACGCAAGTTCAAAGTCTCCTACAGCCTAAATGGCAAGGACTGGGAATATATCCAGGACCCCAGGA 1627
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1628 CTCAGCAGACAAAGCTGTTTGAAGGGAACATGCACTATGACACCCCTGACATCCGAAGGTTCGATCCTGTTCCA 1701
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1702 GCGCAGTATGTGCGGGTGTACCCAGAGAGGTGGTCGCCAGCAGGCATCGGGATGAGGCTGGAGGTGCTGGGCTG 1775
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1776 TGACTGGACAGACTCAAAGCCCACAGTGGAGACGCTGGGACCCACCGTGAAGAGTGAAGAGACTACCACCCCAT 1849
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1850 ATCCCATGGATGAGGATGCCACCGAGTGTGGGGAAAACTGCAGCTTTGAGGATGACAAAGATTTGCAACTTCCT 1923
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1924 TCAGGATTCAACTGCAACTTTGATTTTCCGGAAGAGACCTGTGGTTGGGTGTACGACCATGCCAAGTGGCTCCG 1997
Query 298 -------------------------------------------------------------------------- 297
Sbjct 1998 GAGCACGTGGATCAGCAGCGCTAACCCCAATGACAGAACATTTCCAGATGACAAGAACTTCTTGAAACTGCAGA 2071
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2072 GTGATGGCCGACGAGAGGGCCAGTACGGGCGGCTCATCAGCCCACCGGTGCACCTGCCCCGAAGCCCTGTGTGC 2145
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2146 ATGGAGTTCCAGTACCAAGCCATGGGCGGCCACGGGGTGGCACTGCAGGTGGTTCGGGAAGCCAGCCAGGAAAG 2219
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2220 CAAACTCCTTTGGGTCATCCGTGAGGACCAGGGCAGCGAGTGGAAGCACGGGCGCATTATCCTGCCCAGCTATG 2293
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2294 ACATGGAGTATCAGATCGTGTTCGAGGGAGTGATAGGGAAGGGACGATCGGGAGAGATTTCCATCGATGACATT 2367
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2368 CGGATAAGCACTGATGTCCCACTGGAGAACTGCATGGAACCCATATCAGCTTTTGCAGGTGAGGATTTTAAAGT 2441
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2442 GGACATCCCAGAAACCCATGGGGGAGAGGGCTATGAAGATGAGATTGATGATGAATATGAAGGAGATTGGAGCA 2515
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2516 ACTCTTCTTCCTCTACCTCAGGGGCTGGTGACCCCTCATCTGGCAAAGAAAAGAGCTGGCTGTACACCCTAGAT 2589
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2590 CCCATTCTGATCACCATCATCGCCATGAGCTCGCTGGGGGTCCTGCTGGGGGCCACCTGTGCGGGCCTCCTCCT 2663
Query 298 -------------------------------------------------------------------------- 297
Sbjct 2664 TTACTGCACCTGCTCCTATTCGGGTCTGAGTTCGAGGAGCTGCACCACACTGGAGAACTACAACTTTGAGCTCT 2737
Query 298 -------------------------------------------------------- 297
Sbjct 2738 ACGATGGCCTCAAGCACAAGGTCAAGATCAATCATCAGAAGTGCTGCTCGGAGGCA 2793
