Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11319
- Subject:
- XR_001785177.2
- Aligned Length:
- 2138
- Identities:
- 973
- Gaps:
- 1039
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCACCCGCCGCGCCCCGCCCCGCTGCCGCCGCCACCATTGGCCAGGCGGGAAGTCGGTCTCCCAGCTCATTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGCCCGCGGGAGTGCGGGGGAAACTTCATTATTACTGTGACGCTGAAGGCCGGGGAGGCCCGAGCTGCCTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTGCGACCGCGGGGTCGGCGCTGCGGACCCGGGTGCAGGTGCGGGCGGGGCGGGGATCTCAGGGCACCGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGCCGCACCCGCGGAGGAGGGGGCTGGGCTGTCCGCAGCTCCCTGTCGCCGAGGCGCCTCCCGGCTCTGCTTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCGCTTAGCCGCGGGCGGCGGGTGACCTCCCTGCGTGAAGAGCATCGCGGCGCCGCGGCAGGGGAATTCGCGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGGCTGGCCGCGGGCTCCTCCCACCCAGCTGGCGGGCGGGGCTCGGGGACCTGGTGTCTGGTGCAGACGCCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGCGGCCGAGCCGACGGCTGGACCCTGGAGCAGAAAAACAAAATCGGTGGCTTACTCCAGTTTTGACCCCATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAGAAGTTAAACTGCAGGAATCAAATTAGATGCAAAACTCCTTTGTCGTGAAAAATAGAAGCATGGTTCACTG 592
Query 1 --------------------------------------------------ATGTTATGTTGGGGATATTGGTCT 24
||||||||||||||.|||||||||
Sbjct 593 TTAGCCAGTTGGACTTGTTCAGCTATATGAGACCCTGAAGGATAAGAACAATGTTATGTTGGGGGTATTGGTCT 666
Query 25 CTGGGCCAACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGAGCCCCAGGTGTGTGGGTTCATATCTGA 98
|||||||||||.||.||||||.||||||||||.|||||.||||||||||||||||||||..|.||..||||.||
Sbjct 667 CTGGGCCAACCAGGCATCAGCTCCAACCTGCAAGGAATCGTGGCTGAGCCCCAGGTGTGCCGCTTTGTATCGGA 740
Query 99 CAGAAGTGTCAAGGAAGTGGCCTGTGGGGGAAACCACTCTGTGTTCCTGCTGGAAGATGGGGAAGTTTACACAT 172
||||||..|||||||||||||.||.||.|||||||||||.||||||||||||||.||.|||||.||||||||.|
Sbjct 741 CAGAAGCATCAAGGAAGTGGCGTGCGGAGGAAACCACTCCGTGTTCCTGCTGGAGGACGGGGAGGTTTACACGT 814
Query 173 GTGGTTTGAACACCAAGGGGCAACTGGGCCATGAGAGGGAAGGAAACAAGCCAGAACAAATTGGAGCTCTGGCA 246
||||..|.||||||||||||||.||.|||||||||||||||||.|||||||||||||||||||||||..|.||.
Sbjct 815 GTGGAGTAAACACCAAGGGGCAGCTTGGCCATGAGAGGGAAGGTAACAAGCCAGAACAAATTGGAGCATTAGCT 888
Query 247 GATCAGCATATCATTCATGTGGCATGTGGCGAGTCCCACAGTCTGGCCCTCAGTGACCGAGGCCAGCTGTTTTC 320
||||||||||||||.||.|||||||||||||||||.|||||||||||.|||||||||||.||.|||||||||||
Sbjct 889 GATCAGCATATCATACACGTGGCATGTGGCGAGTCACACAGTCTGGCTCTCAGTGACCGGGGTCAGCTGTTTTC 962
Query 321 TTGGGGTGCAGGGAGTGATGGTCAGCTAGGACTCATGACTACTGAGGATTCTGTGGCAGTGCCCAGGTTAATAC 394
||||||||||||.||||||||.||.||.||.||||||||||||||||||||.|||||.|||||||||.||||.|
Sbjct 963 TTGGGGTGCAGGAAGTGATGGCCAACTGGGCCTCATGACTACTGAGGATTCCGTGGCTGTGCCCAGGCTAATCC 1036
Query 395 AAAAGCTGAACCAGCAAACAATATTACAAGTTTCCTGTGGCAACTGGCATTGCTTGGCTCTTGCGGCTGATGGC 468
|.||.|||||||||||.||.|||||||||||||||||||||||||||||.|||||||||||.||.|||||||||
Sbjct 1037 AGAAACTGAACCAGCAGACCATATTACAAGTTTCCTGTGGCAACTGGCACTGCTTGGCTCTGGCAGCTGATGGC 1110
Query 469 CAGTTCTTCACCTGGGGAAAGAACAGCCATGGGCAGCTTGGCTTAGGGAAGGAGTTCCCCTCCCAAGCCAGCCC 542
|||||||||||.|||||.||||||||||||||.|||||.||..|.|||||||||||||||||||||.|||||||
Sbjct 1111 CAGTTCTTCACATGGGGGAAGAACAGCCATGGACAGCTGGGACTGGGGAAGGAGTTCCCCTCCCAAACCAGCCC 1184
Query 543 ACAGAGGGTGAGGTCCCTGGAGGGGATCCCACTGGCTCAGGTGGCTGCCGGAGGGGCTCACAGCTTTGCCCTGT 616
||||||||||||.||..||||.||||||||.|||||||||||||||||.|||||||||||.|||||||||||||
Sbjct 1185 ACAGAGGGTGAGATCTTTGGAAGGGATCCCGCTGGCTCAGGTGGCTGCAGGAGGGGCTCATAGCTTTGCCCTGT 1258
Query 617 CTCTCTCAGGAGCTGTTTTTGGCTGGGGGATGAATAATGCCGGGCAGCTAGGGCTCAGTGATGAAAAAGATCGA 690
|||||||.||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||.
Sbjct 1259 CTCTCTCGGGAGCTGTTTTTGGCTGGGGAATGAATAATGCAGGGCAGCTAGGGCTCAGTGATGAAAAAGACCGG 1332
Query 691 GAATCTCCATGCCATGTAAAACTCTTACGCACGCAAAAAGTTGTCTATATTAGTTGTGGAGAAGAACACACAGC 764
||.|||||||||||.||.||.||.||||||||.||.|||||.||||||||||||||||||||.||.||||||||
Sbjct 1333 GAGTCTCCATGCCACGTGAAGCTTTTACGCACACAGAAAGTCGTCTATATTAGTTGTGGAGAGGAGCACACAGC 1406
Query 765 AGTTCTCACAAAGAGTGGAGGTGTGTTTACCTTTGGCGCTGGTTCCTGTGGGCAACTTGGACACGACTCCATGA 838
||||||||||||||||||.||.||||||||||||||.|||||.|||||||||||.||||||||.|||||..|||
Sbjct 1407 AGTTCTCACAAAGAGTGGGGGCGTGTTTACCTTTGGTGCTGGCTCCTGTGGGCAGCTTGGACATGACTCGGTGA 1480
Query 839 ATGATGAGGTTAACCCTAGAAGAGTTCTAGAGCTGATGGGTAGTGAAGTAACTCAAATTGCTTGTGGCAGACAA 912
|||||||.|||||.||.||||||||.||.|||||||||||.||||||||||||||.|||||||||||||||||.
Sbjct 1481 ATGATGAAGTTAATCCGAGAAGAGTCCTGGAGCTGATGGGCAGTGAAGTAACTCAGATTGCTTGTGGCAGACAG 1554
Query 913 CATACCCTAGCCTTCGTGCCTTCTTCTGGACTCATCTATGCATTTGGTTGTGGAGCAAGAGGTCAATTAGGAAC 986
||.||.||||||.|.|||||||||||||||||||||||||||||||||||||||||.|.||||||..|.|||||
Sbjct 1555 CACACTCTAGCCCTTGTGCCTTCTTCTGGACTCATCTATGCATTTGGTTGTGGAGCTAAAGGTCAGCTGGGAAC 1628
Query 987 TGGGCACACTTGTAATGTTAAGTGCCCATCTCCTGTCAAGGGTTACTGGGCTGCCCACAGTGGCCAGCTTTCAG 1060
.||.||.||.||||||||.|||||||||||||||||.|||||..||||||||||||||||..|.||||||||||
Sbjct 1629 CGGACATACATGTAATGTCAAGTGCCCATCTCCTGTGAAGGGCCACTGGGCTGCCCACAGCAGTCAGCTTTCAG 1702
Query 1061 C-----CCGA--GCTGGTAAGAAT--------------GATTGTCTCTGGA-----------ATTTAAAGGTAT 1102
| |||| ||| .||||.|| |||..|||||||| .||| |||.
Sbjct 1703 CTCGCGCCGATCGCT-TTAAGTATCGTGTCGTTAAGCAGATCTTCTCTGGAGGGGACCAGACTTTT----GTAC 1771
Query 1103 TT------------------------------------------------------------------------ 1104
||
Sbjct 1772 TTTGCTCCACGTATGAGTGGTGTTGTTCAGATACTGTCTTCTGCAGCTTGTTGGAATGGAAGCTTTCTGGAAAA 1845
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1846 AAAAATTGATGAACATTTTAAAACTAGTCCCAAAATCCCCGGGATTGACCTGAACTCAACTAGGATTTTATTTG 1919
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1920 AGAAGTTAATGCACTCTCAGCACTCCATGATTCTAGAACAGATATTAAACAGCTTTGAAAGTTGCCTCATTCCC 1993
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1994 CAGTTATCAAGTTCACCCCCAGATGTGGAAGCAATGAGAATCTATTTAATCCTACCGGAGTTTCCGCTGCTTCA 2067
Query 1105 ------------------------------------------------------------------ 1104
Sbjct 2068 GGACTCTAAGTATTACATAACGCTGACCATTCCCCTGGCAATGGCCATTCTGCGGCTGGAAACAAA 2133
