Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11319
- Subject:
- XR_003956257.1
- Aligned Length:
- 2296
- Identities:
- 973
- Gaps:
- 1197
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCACCCGCCGCGCCCCGCCCCGCTGCCGCCGCCACCATTGGCCAGGCGGGAAGTCGGTCTCCCAGCTCATTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGCCCGCGGGAGTGCGGGGGAAACTTCATTATTACTGTGACGCTGAAGGCCGGGGAGGCCCGAGCTGCCTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTGCGACCGCGGGGTCGGCGCTGCGGACCCGGGTGCAGGTGCGGGCGGGGCGGGGATCTCAGGGCACCGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGCCGCACCCGCGGAGGAGGGGGCTGGGCTGTCCGCAGCTCCCTGTCGCCGAGGCGCCTCCCGGCTCTGCTTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCGCTTAGCCGCGGGCGGCGGGTGACCTCCCTGCGTGAAGAGCATCGCGGCGCCGCGGCAGGGGAATTCGCGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGGCTGGCCGCGGGCTCCTCCCACCCAGCTGGCGGGCGGGGCTCGGGGACCTGGTGTCTGGTGCAGACGCCG 444
Query 1 ---------------------------------------------------------------ATGTTATGTTG 11
|||||||||||
Sbjct 445 CTGCGGCCGAGCCGACGGCTGGACCCTGGAGCAGGCTATATGAGACCCTGAAGGATAAGAACAATGTTATGTTG 518
Query 12 GGGATATTGGTCTCTGGGCCAACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGAGCCCCAGGTGTGTG 85
|||.||||||||||||||||||||.||.||||||.||||||||||.|||||.||||||||||||||||||||..
Sbjct 519 GGGGTATTGGTCTCTGGGCCAACCAGGCATCAGCTCCAACCTGCAAGGAATCGTGGCTGAGCCCCAGGTGTGCC 592
Query 86 GGTTCATATCTGACAGAAGTGTCAAGGAAGTGGCCTGTGGGGGAAACCACTCTGTGTTCCTGCTGGAAGATGGG 159
|.||..||||.||||||||..|||||||||||||.||.||.|||||||||||.||||||||||||||.||.|||
Sbjct 593 GCTTTGTATCGGACAGAAGCATCAAGGAAGTGGCGTGCGGAGGAAACCACTCCGTGTTCCTGCTGGAGGACGGG 666
Query 160 GAAGTTTACACATGTGGTTTGAACACCAAGGGGCAACTGGGCCATGAGAGGGAAGGAAACAAGCCAGAACAAAT 233
||.||||||||.|||||..|.||||||||||||||.||.|||||||||||||||||.|||||||||||||||||
Sbjct 667 GAGGTTTACACGTGTGGAGTAAACACCAAGGGGCAGCTTGGCCATGAGAGGGAAGGTAACAAGCCAGAACAAAT 740
Query 234 TGGAGCTCTGGCAGATCAGCATATCATTCATGTGGCATGTGGCGAGTCCCACAGTCTGGCCCTCAGTGACCGAG 307
||||||..|.||.||||||||||||||.||.|||||||||||||||||.|||||||||||.|||||||||||.|
Sbjct 741 TGGAGCATTAGCTGATCAGCATATCATACACGTGGCATGTGGCGAGTCACACAGTCTGGCTCTCAGTGACCGGG 814
Query 308 GCCAGCTGTTTTCTTGGGGTGCAGGGAGTGATGGTCAGCTAGGACTCATGACTACTGAGGATTCTGTGGCAGTG 381
|.|||||||||||||||||||||||.||||||||.||.||.||.||||||||||||||||||||.|||||.|||
Sbjct 815 GTCAGCTGTTTTCTTGGGGTGCAGGAAGTGATGGCCAACTGGGCCTCATGACTACTGAGGATTCCGTGGCTGTG 888
Query 382 CCCAGGTTAATACAAAAGCTGAACCAGCAAACAATATTACAAGTTTCCTGTGGCAACTGGCATTGCTTGGCTCT 455
||||||.||||.||.||.|||||||||||.||.|||||||||||||||||||||||||||||.|||||||||||
Sbjct 889 CCCAGGCTAATCCAGAAACTGAACCAGCAGACCATATTACAAGTTTCCTGTGGCAACTGGCACTGCTTGGCTCT 962
Query 456 TGCGGCTGATGGCCAGTTCTTCACCTGGGGAAAGAACAGCCATGGGCAGCTTGGCTTAGGGAAGGAGTTCCCCT 529
.||.||||||||||||||||||||.|||||.||||||||||||||.|||||.||..|.||||||||||||||||
Sbjct 963 GGCAGCTGATGGCCAGTTCTTCACATGGGGGAAGAACAGCCATGGACAGCTGGGACTGGGGAAGGAGTTCCCCT 1036
Query 530 CCCAAGCCAGCCCACAGAGGGTGAGGTCCCTGGAGGGGATCCCACTGGCTCAGGTGGCTGCCGGAGGGGCTCAC 603
|||||.|||||||||||||||||||.||..||||.||||||||.|||||||||||||||||.|||||||||||.
Sbjct 1037 CCCAAACCAGCCCACAGAGGGTGAGATCTTTGGAAGGGATCCCGCTGGCTCAGGTGGCTGCAGGAGGGGCTCAT 1110
Query 604 AGCTTTGCCCTGTCTCTCTCAGGAGCTGTTTTTGGCTGGGGGATGAATAATGCCGGGCAGCTAGGGCTCAGTGA 677
||||||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||||||||||||||
Sbjct 1111 AGCTTTGCCCTGTCTCTCTCGGGAGCTGTTTTTGGCTGGGGAATGAATAATGCAGGGCAGCTAGGGCTCAGTGA 1184
Query 678 TGAAAAAGATCGAGAATCTCCATGCCATGTAAAACTCTTACGCACGCAAAAAGTTGTCTATATTAGTTGTGGAG 751
|||||||||.||.||.|||||||||||.||.||.||.||||||||.||.|||||.|||||||||||||||||||
Sbjct 1185 TGAAAAAGACCGGGAGTCTCCATGCCACGTGAAGCTTTTACGCACACAGAAAGTCGTCTATATTAGTTGTGGAG 1258
Query 752 AAGAACACACAGCAGTTCTCACAAAGAGTGGAGGTGTGTTTACCTTTGGCGCTGGTTCCTGTGGGCAACTTGGA 825
|.||.||||||||||||||||||||||||||.||.||||||||||||||.|||||.|||||||||||.||||||
Sbjct 1259 AGGAGCACACAGCAGTTCTCACAAAGAGTGGGGGCGTGTTTACCTTTGGTGCTGGCTCCTGTGGGCAGCTTGGA 1332
Query 826 CACGACTCCATGAATGATGAGGTTAACCCTAGAAGAGTTCTAGAGCTGATGGGTAGTGAAGTAACTCAAATTGC 899
||.|||||..||||||||||.|||||.||.||||||||.||.|||||||||||.||||||||||||||.|||||
Sbjct 1333 CATGACTCGGTGAATGATGAAGTTAATCCGAGAAGAGTCCTGGAGCTGATGGGCAGTGAAGTAACTCAGATTGC 1406
Query 900 TTGTGGCAGACAACATACCCTAGCCTTCGTGCCTTCTTCTGGACTCATCTATGCATTTGGTTGTGGAGCAAGAG 973
||||||||||||.||.||.||||||.|.|||||||||||||||||||||||||||||||||||||||||.|.||
Sbjct 1407 TTGTGGCAGACAGCACACTCTAGCCCTTGTGCCTTCTTCTGGACTCATCTATGCATTTGGTTGTGGAGCTAAAG 1480
Query 974 GTCAATTAGGAACTGGGCACACTTGTAATGTTAAGTGCCCATCTCCTGTCAAGGGTTACTGGGCTGCCCACAGT 1047
||||..|.|||||.||.||.||.||||||||.|||||||||||||||||.|||||..||||||||||||||||.
Sbjct 1481 GTCAGCTGGGAACCGGACATACATGTAATGTCAAGTGCCCATCTCCTGTGAAGGGCCACTGGGCTGCCCACAGC 1554
Query 1048 GGCCAGCTTTCAGC-----CCGA--GCTGGTAAGAAT--------------GATTGTCTCTGGA---------- 1090
.|.||||||||||| |||| ||| .||||.|| |||..||||||||
Sbjct 1555 AGTCAGCTTTCAGCTCGCGCCGATCGCT-TTAAGTATCGTGTCGTTAAGCAGATCTTCTCTGGAGGGGACCAGA 1627
Query 1091 -ATTTAAAGGTATTT----------------------------------------------------------- 1104
.||| |||.||
Sbjct 1628 CTTTT----GTACTTTGCTCCACGTATGAGAATTCTTCTCCTGCTGTTGACTTCAGAACTGTGAACCAAACACA 1697
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1698 TTATACCAACTTAATAAATGATGAAACCATAGCAGTTTGGAGACAAAAACTCACAGAACACAACAACGCAAATA 1771
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1772 CTGTCAACGGAAGCTCGAGGAATCATCTCTAAGGATCTTACTTGATCCAAATGCTACAGCTGACAGAAGTTACT 1845
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1846 ACGATCTCTTTCCTAGCCATTTACTTTGTTTATCCCTTGCTTCTTATGGCAATCCTGGGTGCTCACAGGGTAGA 1919
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1920 CCCTTCCACAGACTCTGCAGAATTTAGTGGTGTTGTTCAGATACTGTCTTCTGCAGCTTGTTGGAATGGAAGCT 1993
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1994 TTCTGGAAAAAAAAATTGATGAACATTTTAAAACTAGTCCCAAAATCCCCGGGATTGACCTGAACTCAACTAGG 2067
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2068 ATTTTATTTGAGAAGTTAATGCACTCTCAGCACTCCATGATTCTAGAACAGATATTAAACAGCTTTGAAAGTTG 2141
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2142 CCTCATTCCCCAGTTATCAAGTTCACCCCCAGATGTGGAAGCAATGAGAATCTATTTAATCCTACCGGAGTTTC 2215
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2216 CGCTGCTTCAGGACTCTAAGTATTACATAACGCTGACCATTCCCCTGGCAATGGCCATTCTGCGGCTGGAAACA 2289
Query 1105 -- 1104
Sbjct 2290 AA 2291
