Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11327
- Subject:
- NM_001025428.1
- Aligned Length:
- 3513
- Identities:
- 357
- Gaps:
- 3126
Alignment
Query 1 ATGAGTCCTGGATGCATGCTGCTGTTTGTGTTTGGCTTTGTTGGCGGGGCGGTGGTCATTAATTCTGCTATCTT 74
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGAATCCTGGATGCATGCTGCTGTTTGTGTTTGGCTTTGTTGGCGGGGCGGTGGTCATTAATTCTGCGATCTT 74
Query 75 AGTATCTCTCTCTGTTTTGCTGCTTGTGCACTTTTCTATTTCTACCGGTGTGCCAGCTCTGACGCAGAACCTAC 148
||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||||
Sbjct 75 AGTATCTCTCTCTGTTTTGCTGCTTGTGCACTTTTCTATTTCTACCGGGGTGCCAGCGCTGACGCAGAACCTAC 148
Query 149 CAAGGATACTCAGAAAAGAACGCCCTATATCATTAGGAATTTTCCCATTACCTGCTGGAGATGGATTGCTTACA 222
||||||||||||||||||||||.||||||||||||||.||||||||..||||||||||||||||||||||||||
Sbjct 149 CAAGGATACTCAGAAAAGAACGTCCTATATCATTAGGGATTTTCCCTCTACCTGCTGGAGATGGATTGCTTACA 222
Query 223 CCTGATGCTCAGAAAGGAGGAGAGACCCCTGGATCTGAGCAATGGAAATTTCAGGAATTAAGTCAACCACGTTC 296
|||||..|||||||||||||.||||||||.|||||.|||||||||||||||||.||||||||||||||||||||
Sbjct 223 CCTGACACTCAGAAAGGAGGCGAGACCCCAGGATCAGAGCAATGGAAATTTCAAGAATTAAGTCAACCACGTTC 296
Query 297 TCATACCAGCCTGAAGG--------TCAG-CAATAGTC---------CTGAACCT--CAGAAGGCTGTAG---- 346
||||||||||||||||| ||.| .|.||||| ||.||.|| || ||..||
Sbjct 297 TCATACCAGCCTGAAGGATGAACTTTCTGATATTAGTCAAGGTGGATCTAAAGCTACCA-----CTCCAGCTTC 365
Query 347 AACAG--------GAGG--TGAGAA--------TGGTGCTTCTT------AACAT---------TTTGCAAAA- 386
||||| ||.| |.||.| ||.|.||.|.| ||.|| ||||.||||
Sbjct 366 AACAGCAAATTCAGACGTATCAGCAATTCCTCCTGATACTCCGTCAAAGGAAGATAATGAAGGATTTGTAAAAG 439
Query 387 ----AGTATAC--------------------------------------------------------------- 393
|| ||||
Sbjct 440 GCACAG-ATACATCAAATAAGTCAGAGATAAGCAAACACATAGAAGTCCAGGTTGCCCAAGAGACTAGGAATGT 512
Query 394 -------------------------------------------------------------------------- 393
Sbjct 513 GTCTACAGAATCTGGTGAAAATGAAGAGAAATCAGAAGTTCAAGCAATCATTGAATCCACTCCTGAATTGGATA 586
Query 394 -------------------------------------------------------------------------- 393
Sbjct 587 TGGACAAAGACCTCAGTGGATATAAAGGTTCAAGCACTCCCACCAAAGGCATAGAGAACAAAGCTTTTGATCGC 660
Query 394 -------------------------------------------------------------------------- 393
Sbjct 661 AATACAGAATCTCTCTTTGAAGAGCTGTCCTCAGCTGGCTCGGGCCTTATTGGAGATGTGGATGAAGGAGCGGA 734
Query 394 -------------------------------------------------------------------------- 393
Sbjct 735 TTTACTAGACCATAATTTCTTTGGAATGGGTCGTGAGGTGGAGAATCTCATACTGGAGAACACACAGCTGCTGG 808
Query 394 -------------------------------------------------------------------------- 393
Sbjct 809 AAACCAAAAACGCTCTGAATGTAGTGAAGAATGACTTAATAGCCAAAGTGGATGAGCTGACCTGTGAGAAGGAC 882
Query 394 -------------------------------------------------------------------------- 393
Sbjct 883 GTGCTGCAGGGGGAGCTGGAGGCTGTGAAGCAAGCCAAGCTGAAGCTGGAGGACAAGAACAGAGAGCTGGAGGA 956
Query 394 -------------------------------------------------------------------------- 393
Sbjct 957 GGAGCTCAGGAAAGCTCGTGCAGAAGCTGAAGATGCAAGGCAAAAAGCAAAAGACGATGATGATAGTGACATTC 1030
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1031 CCACAGCCCAGAGGAAGAGGTTTACCAGAGTAGAAATGGCCCGAGTTCTCATGGAGAGAAACCAGTACAAAGAG 1104
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1105 AGGCTGATGGAGCTTCAAGAAGCTGTTCGATGGACGGAGATGATCCGGGCCTCACGAGAGAACCCAGCTATGCA 1178
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1179 AGAAAAGAAAAGGTCAAGCATCTGGCAATTTTTCAGCCGACTTTTTAGCTCTTCAAGTAATGCAACAAAGAAGC 1252
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1253 CTGAACCCCCTGTTAACCTGAAGTACAACGCCCCCACCTCTCACGTGACTCCCTCCGTGAAGAAAAGGAGCAGC 1326
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1327 ACTTTATCTCAGCTCCCTGGGGACAAGTCCAAGGCATTTGATTTCCTCAGTGAGGAAACTGAGGCTAGTTTAGC 1400
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1401 CTCCCGCAGAGAGCAAAAGAGAGAGCAGTATCGGCAGGTGAAGGCTCACGTTCAGAAGGAAGATGGCCGAGTGC 1474
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1475 AAGCTTTCGGCTGGAGTCTGCCTCAGAAGTACAAACAGGTAGCCAATGGTCAAGGGGAAACTAAGATGAAAAAT 1548
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1549 TTACCTGTGCCTGTCTATCTCAGACCACTAGACGAAAAAGATGCGTCTATGAAGCTGTGGTGTGCTGTAGGAGT 1622
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1623 CAATTTATCTGGTGGCAAGACAAGAGATGGCGGGTCTGTTGTTGGAGCGAGTGTATTTTACAAGGATATTGCTG 1696
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1697 GTTTGGACACTGAAGGCAGTAAACAGCGGAGTGCGTCTCAGAGTAGTTTAGACAAGTTGGATCAAGAACTCAAG 1770
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1771 GAACAGCAGAAAGAATTTAAAAATCAAGAAGAGTTGTCCAGTCAGGTCTGGATCTGTACCAGCACCCACTCAAC 1844
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1845 TACAAAGGTTATCATCATTGATGCTGTTCAGCCTGGCAACATCCTAGATAGTTTCACTGTTTGCAATTCTCATG 1918
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1919 TTCTGTGCATTGCCAGTGTCCCAGGAGCTCGGGAAACAGACTACCCTGCAGGAGAAGAACTTTCTGAATCTGGT 1992
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1993 CAGGTAGACAAAGCGTCATTGTGTGGAAGCATGACCAGTAACAGCTCCGCAGAGATGGACAGCTTGCTGGGAGG 2066
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2067 CATCACAGTGGTTGGGTGCTCCACAGAAGGACTGACAGGAGCTGCCACTTCCCCAAGTACCAACGGTGCTTCTC 2140
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2141 CTGTGATTGAAAAGCCACCAGAAATGGAAACTGAAAATAGCGAAGTTGATGAAAATATTCCAACAGCAGAAGAA 2214
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2215 GCAACTGAAGCCACAGAGGGCAATGCAGGGTCCACTGAAGACACTGTGGACATCTCCCAGCCTGGCGTGTACAC 2288
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2289 AGAGCATGTGTTTACAGATCCACTGGGAGTTCAGATCCCAGAAGACCTCTCCCCAGTGTTTCAGTCAAGTAATG 2362
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2363 ACTCAGATGTGTACAAAGATCAAATATCAGTATTGCCAAATGAACAAGACCTTGCGAGAGAAGAAGCTCAGAAA 2436
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2437 ATGAGTAGTCTTTTACCAACCATGTGGCTTGGAGCTCAGAATGGCTGTTTGTATGTCCACTCATCTGTAGCCCA 2510
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2511 GTGGAGGAAATGTCTCCATTCCATTAAGCTCAAAGACTCAATTCTCAGTATTGTACATGTGAAAGGAATTGTAC 2584
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2585 TAGTGGCCCTGGCGGATGGCACCCTTGCAATCTTCCACAGAGGAGTTGATGGACAATGGGATCTGTCAAACTAT 2658
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2659 CACCTTTTAGACCTTGGACGTCCTCATCATTCCATACGATGCATGACTGTGGTACATGACAAAGTCTGGTGTGG 2732
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2733 CTATAGGAACAAAATCTATGTGGTTCAACCAAAGGCTATGAAGATAGAGAAATCATTTGATGCACACCCCAGGA 2806
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2807 AGGAGAGCCAAGTACGGCAGCTTGCATGGGTGGGTGATGGTGTATGGGTCTCCATTCGTTTGGATTCCACGCTC 2880
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2881 CGCCTCTATCATGCACACACATACCAACATCTCCAGGATGTGGATATTGAGCCTTATGTAAGCAAAATGTTAGG 2954
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2955 TACTGGAAAACTGGGTTTCTCTTTCGTGAGGATAACAGCTCTTATGGTGTCTTGCAATCGTTTGTGGGTGGGGA 3028
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3029 CTGGAAATGGTGTCATTATCTCCATCCCACTGACAGAAACAAATAAAACCTCAGGGACTCCAGGTAACCGTCCT 3102
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3103 GGAAGTGTAATCCGTGTATATGGTGATGAGAACAGTGATAAAGTGACTCCAGGGACATTTATACCCTACTGTTC 3176
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3177 AATGGCACATGCACAGCTTTGTTTCCACGGGCACCGGGATGCTGTGAAATTCTTTGTGGCAGTCCCAGGTCAGG 3250
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3251 TCATTAGCCCACAAAGTAGCAGTGGTGGGGCAGATCTTACAGCTGACAAGGCAGGGTCATCTGCACAGGAGCCC 3324
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3325 AGTAGCCAGACGCCCTTGAAGTCCATGCTTGTCATCAGTGGAGGAGAGGGCTACATTGACTTCCGGATGGGTGA 3398
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3399 TGAAGGTGGAGAATCTGAACTTCTGGGAGAGGATCTTCCACTGGAACCTTCAGTCACCAAAGCCGAGAGGAGTC 3472
Query 394 ----------------------------------- 393
Sbjct 3473 ACCTGATAGTGTGGCAAGTGATGTGTGGCAATGAA 3507