Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11327
- Subject:
- NM_001025429.1
- Aligned Length:
- 3510
- Identities:
- 357
- Gaps:
- 3123
Alignment
Query 1 ATGAGTCCTGGATGCATGCTGCTGTTTGTGTTTGGCTTTGTTGGCGGGGCGGTGGTCATTAATTCTGCTATCTT 74
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGAATCCTGGATGCATGCTGCTGTTTGTGTTTGGCTTTGTTGGCGGGGCGGTGGTCATTAATTCTGCGATCTT 74
Query 75 AGTATCTCTCTCTGTTTTGCTGCTTGTGCACTTTTCTATTTCTACCGGTGTGCCAGCTCTGACGCAGAACCTAC 148
||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||||||||||
Sbjct 75 AGTATCTCTCTCTGTTTTGCTGCTTGTGCACTTTTCTATTTCTACCGGGGTGCCAGCGCTGACGCAGAACCTAC 148
Query 149 CAAGGATACTCAGAAAAGAACGCCCTATATCATTAGGAATTTTCCCATTACCTGCTGGAGATGGATTGCTTACA 222
||||||||||||||||||||||.||||||||||||||.||||||||..||||||||||||||||||||||||||
Sbjct 149 CAAGGATACTCAGAAAAGAACGTCCTATATCATTAGGGATTTTCCCTCTACCTGCTGGAGATGGATTGCTTACA 222
Query 223 CCTGATGCTCAGAAAGGAGGAGAGACCCCTGGATCTGAGCAATGGAAATTTCAGGAATTAAGTCAACCACGTTC 296
|||||..|||||||||||||.||||||||.|||||.|||||||||||||||||.||||||||||||||||||||
Sbjct 223 CCTGACACTCAGAAAGGAGGCGAGACCCCAGGATCAGAGCAATGGAAATTTCAAGAATTAAGTCAACCACGTTC 296
Query 297 TCATACCAGCCTGAAGG--------TCAG-CAATAGTC---------CTGAACCT--CAGAAGGCTGTAG---- 346
||||||||||||||||| ||.| .|.||||| ||.||.|| || ||..||
Sbjct 297 TCATACCAGCCTGAAGGATGAACTTTCTGATATTAGTCAAGGTGGATCTAAAGCTACCA-----CTCCAGCTTC 365
Query 347 AACAG--------GAGG--TGAGAA--------TGGTGCTTCTT------AACAT---------TTTGCAAAA- 386
||||| ||.| |.||.| ||.|.||.|.| ||.|| ||||.||||
Sbjct 366 AACAGCAAATTCAGACGTATCAGCAATTCCTCCTGATACTCCGTCAAAGGAAGATAATGAAGGATTTGTAAAAG 439
Query 387 ----AGTATAC--------------------------------------------------------------- 393
|| ||||
Sbjct 440 GCACAG-ATACATCAAATAAGTCAGAGATAAGCAAACACATAGAAGTCCAGGTTGCCCAAGAGACTAGGAATGT 512
Query 394 -------------------------------------------------------------------------- 393
Sbjct 513 GTCTACAGAATCTGGTGAAAATGAAGAGAAATCAGAAGTTCAAGCAATCATTGAATCCACTCCTGAATTGGATA 586
Query 394 -------------------------------------------------------------------------- 393
Sbjct 587 TGGACAAAGACCTCAGTGGATATAAAGGTTCAAGCACTCCCACCAAAGGCATAGAGAACAAAGCTTTTGATCGC 660
Query 394 -------------------------------------------------------------------------- 393
Sbjct 661 AATACAGAATCTCTCTTTGAAGAGCTGTCCTCAGCTGGCTCGGGCCTTATTGGAGATGTGGATGAAGGAGCGGA 734
Query 394 -------------------------------------------------------------------------- 393
Sbjct 735 TTTACTAGGGGAATATTCTGGAATGGGTCGTGAGGTGGAGAATCTCATACTGGAGAACACACAGCTGCTGGAAA 808
Query 394 -------------------------------------------------------------------------- 393
Sbjct 809 CCAAAAACGCTCTGAATGTAGTGAAGAATGACTTAATAGCCAAAGTGGATGAGCTGACCTGTGAGAAGGACGTG 882
Query 394 -------------------------------------------------------------------------- 393
Sbjct 883 CTGCAGGGGGAGCTGGAGGCTGTGAAGCAAGCCAAGCTGAAGCTGGAGGACAAGAACAGAGAGCTGGAGGAGGA 956
Query 394 -------------------------------------------------------------------------- 393
Sbjct 957 GCTCAGGAAAGCTCGTGCAGAAGCTGAAGATGCAAGGCAAAAAGCAAAAGACGATGATGATAGTGACATTCCCA 1030
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1031 CAGCCCAGAGGAAGAGGTTTACCAGAGTAGAAATGGCCCGAGTTCTCATGGAGAGAAACCAGTACAAAGAGAGG 1104
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1105 CTGATGGAGCTTCAAGAAGCTGTTCGATGGACGGAGATGATCCGGGCCTCACGAGAGAACCCAGCTATGCAAGA 1178
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1179 AAAGAAAAGGTCAAGCATCTGGCAATTTTTCAGCCGACTTTTTAGCTCTTCAAGTAATGCAACAAAGAAGCCTG 1252
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1253 AACCCCCTGTTAACCTGAAGTACAACGCCCCCACCTCTCACGTGACTCCCTCCGTGAAGAAAAGGAGCAGCACT 1326
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1327 TTATCTCAGCTCCCTGGGGACAAGTCCAAGGCATTTGATTTCCTCAGTGAGGAAACTGAGGCTAGTTTAGCCTC 1400
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1401 CCGCAGAGAGCAAAAGAGAGAGCAGTATCGGCAGGTGAAGGCTCACGTTCAGAAGGAAGATGGCCGAGTGCAAG 1474
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1475 CTTTCGGCTGGAGTCTGCCTCAGAAGTACAAACAGGTAGCCAATGGTCAAGGGGAAACTAAGATGAAAAATTTA 1548
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1549 CCTGTGCCTGTCTATCTCAGACCACTAGACGAAAAAGATGCGTCTATGAAGCTGTGGTGTGCTGTAGGAGTCAA 1622
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1623 TTTATCTGGTGGCAAGACAAGAGATGGCGGGTCTGTTGTTGGAGCGAGTGTATTTTACAAGGATATTGCTGGTT 1696
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1697 TGGACACTGAAGGCAGTAAACAGCGGAGTGCGTCTCAGAGTAGTTTAGACAAGTTGGATCAAGAACTCAAGGAA 1770
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1771 CAGCAGAAAGAATTTAAAAATCAAGAAGAGTTGTCCAGTCAGGTCTGGATCTGTACCAGCACCCACTCAACTAC 1844
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1845 AAAGGTTATCATCATTGATGCTGTTCAGCCTGGCAACATCCTAGATAGTTTCACTGTTTGCAATTCTCATGTTC 1918
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1919 TGTGCATTGCCAGTGTCCCAGGAGCTCGGGAAACAGACTACCCTGCAGGAGAAGAACTTTCTGAATCTGGTCAG 1992
Query 394 -------------------------------------------------------------------------- 393
Sbjct 1993 GTAGACAAAGCGTCATTGTGTGGAAGCATGACCAGTAACAGCTCCGCAGAGATGGACAGCTTGCTGGGAGGCAT 2066
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2067 CACAGTGGTTGGGTGCTCCACAGAAGGACTGACAGGAGCTGCCACTTCCCCAAGTACCAACGGTGCTTCTCCTG 2140
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2141 TGATTGAAAAGCCACCAGAAATGGAAACTGAAAATAGCGAAGTTGATGAAAATATTCCAACAGCAGAAGAAGCA 2214
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2215 ACTGAAGCCACAGAGGGCAATGCAGGGTCCACTGAAGACACTGTGGACATCTCCCAGCCTGGCGTGTACACAGA 2288
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2289 GCATGTGTTTACAGATCCACTGGGAGTTCAGATCCCAGAAGACCTCTCCCCAGTGTTTCAGTCAAGTAATGACT 2362
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2363 CAGATGTGTACAAAGATCAAATATCAGTATTGCCAAATGAACAAGACCTTGCGAGAGAAGAAGCTCAGAAAATG 2436
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2437 AGTAGTCTTTTACCAACCATGTGGCTTGGAGCTCAGAATGGCTGTTTGTATGTCCACTCATCTGTAGCCCAGTG 2510
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2511 GAGGAAATGTCTCCATTCCATTAAGCTCAAAGACTCAATTCTCAGTATTGTACATGTGAAAGGAATTGTACTAG 2584
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2585 TGGCCCTGGCGGATGGCACCCTTGCAATCTTCCACAGAGGAGTTGATGGACAATGGGATCTGTCAAACTATCAC 2658
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2659 CTTTTAGACCTTGGACGTCCTCATCATTCCATACGATGCATGACTGTGGTACATGACAAAGTCTGGTGTGGCTA 2732
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2733 TAGGAACAAAATCTATGTGGTTCAACCAAAGGCTATGAAGATAGAGAAATCATTTGATGCACACCCCAGGAAGG 2806
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2807 AGAGCCAAGTACGGCAGCTTGCATGGGTGGGTGATGGTGTATGGGTCTCCATTCGTTTGGATTCCACGCTCCGC 2880
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2881 CTCTATCATGCACACACATACCAACATCTCCAGGATGTGGATATTGAGCCTTATGTAAGCAAAATGTTAGGTAC 2954
Query 394 -------------------------------------------------------------------------- 393
Sbjct 2955 TGGAAAACTGGGTTTCTCTTTCGTGAGGATAACAGCTCTTATGGTGTCTTGCAATCGTTTGTGGGTGGGGACTG 3028
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3029 GAAATGGTGTCATTATCTCCATCCCACTGACAGAAACAAATAAAACCTCAGGGACTCCAGGTAACCGTCCTGGA 3102
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3103 AGTGTAATCCGTGTATATGGTGATGAGAACAGTGATAAAGTGACTCCAGGGACATTTATACCCTACTGTTCAAT 3176
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3177 GGCACATGCACAGCTTTGTTTCCACGGGCACCGGGATGCTGTGAAATTCTTTGTGGCAGTCCCAGGTCAGGTCA 3250
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3251 TTAGCCCACAAAGTAGCAGTGGTGGGGCAGATCTTACAGCTGACAAGGCAGGGTCATCTGCACAGGAGCCCAGT 3324
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3325 AGCCAGACGCCCTTGAAGTCCATGCTTGTCATCAGTGGAGGAGAGGGCTACATTGACTTCCGGATGGGTGATGA 3398
Query 394 -------------------------------------------------------------------------- 393
Sbjct 3399 AGGTGGAGAATCTGAACTTCTGGGAGAGGATCTTCCACTGGAACCTTCAGTCACCAAAGCCGAGAGGAGTCACC 3472
Query 394 -------------------------------- 393
Sbjct 3473 TGATAGTGTGGCAAGTGATGTGTGGCAATGAA 3504
