Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11339
- Subject:
- NM_001322266.1
- Aligned Length:
- 1570
- Identities:
- 826
- Gaps:
- 740
Alignment
Query 1 ATGGCTTCCTCGCGAGCCTCTTCCACGGCAACCAAAACTAAAGCACCCGACGACTTAGTTGCTCCGGTCGTGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAAACCACACATCTATTATGGAAGTTTGGAAGAGAAGGAGAGGGAGCGTCTGGCCAAAGGAGAGTCTGGGATTT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGGGGAAAGACGGACTTAAAGCAGGGATCGAAGCTGGAAATATTAATATAACCTCTGGAGAAGTGTTTGAAATT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAAGAGCATATCAGCGAGCGACAGGCAGAAGTATTGGCTGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGATCAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCCTTAGAGCCTTGGGGGAACCCATCACACTTTTTGGAGAGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GTCCTGCTGAAAGAAGAGAAAGGTTAAGAAATATCCTCTCAGTTGTCGGTACTGATGCCTTGAAAAAGACCAAA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AAGGATGATGAGAAGTCTAAAAAGTCCAAAGAAGAGTATCAGCAAACCTGGTATCATGAAGGACCAAATAGCTT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GAAGGTGGCAAGACTATGGATTGCTAATTATTCGTTGCCCAGGGCAATGAAACGCTTGGAAGAGGCCCGACTCC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 ATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGAATAAT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 TTTTGCAGTCAGATTGGGGATGATCGGCCTATCTCCTACTGTCACTTTAGTCCCAATTCCAAGATGCTGGCCAC 740
|||||..||
Sbjct 1 ---------------------------------------------------------------ATGCTTTCC-- 9
Query 741 AGCTTG-------TTGGAGTGGGCTTTGCAAGCTCTGGTCTGTTCCTGATTGCAACCTCCTTCACACTCTTCGA 807
.||| |.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10 --TTTGTATTTGATAGGAGTGGGCTTTGCAAGCTCTGGTCTGTTCCTGATTGCAACCTCCTTCACACTCTTCGA 81
Query 808 GGGCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCCTTGGACCCAAAAGATGTCAA 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 82 GGGCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCCTTGGACCCAAAAGATGTCAA 155
Query 882 CCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGCTTTGGAGTCTCGACAGTGATGAACCAGTGGCAGATATTG 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 156 CCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGCTTTGGAGTCTCGACAGTGATGAACCAGTGGCAGATATTG 229
Query 956 AAGGCCATACAGTGCGTGTGGCGCGGGTAATGTGGCATCCTTCAGGACGTTTCCTGGGCACCACCTGCTATGAC 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 230 AAGGCCATACAGTGCGTGTGGCGCGGGTAATGTGGCATCCTTCAGGACGTTTCCTGGGCACCACCTGCTATGAC 303
Query 1030 CGTTCATGGCGCTTATGGGATTTGGAGGCTCAAGAGGAGATCCTGCATCAGGAAGGCCATAGCATGGGTGTGTA 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 CGTTCATGGCGCTTATGGGATTTGGAGGCTCAAGAGGAGATCCTGCATCAGGAAGGCCATAGCATGGGTGTGTA 377
Query 1104 TGACATTGCCTTCCATCAAGATGGCTCTTTGGCTGGCACTGGGGGACTGGATGCATTTGGTCGAGTTTGGGACC 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 378 TGACATTGCCTTCCATCAAGATGGCTCTTTGGCTGGCACTGGGGGACTGGATGCATTTGGTCGAGTTTGGGACC 451
Query 1178 TACGCACAGGACGTTGTATCATGTTCTTAGAAGGCCACCTGAAAGAAATCTATGGAATAAATTTCTCCCCCAAT 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 452 TACGCACAGGACGTTGTATCATGTTCTTAGAAGGCCACCTGAAAGAAATCTATGGAATAAATTTCTCCCCCAAT 525
Query 1252 GGCTATCACATTGCAACCGGCAGTGGTGACAACACCTGCAAAGTGTGGGACCTCCGACAGCGGCGTTGCGTCTA 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 526 GGCTATCACATTGCAACCGGCAGTGGTGACAACACCTGCAAAGTGTGGGACCTCCGACAGCGGCGTTGCGTCTA 599
Query 1326 CACCATCCCTGCTCATCAGAACTTAGTGACTGGTGTCAAGTTTGAGCCTATCCATGGGAACTTCTTGCTTACTG 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CACCATCCCTGCTCATCAGAACTTAGTGACTGGTGTCAAGTTTGAGCCTATCCATGGGAACTTCTTGCTTACTG 673
Query 1400 GTGCCTATGATAACACAGCCAAGATCTGGACGCACCCAGGCTGGTCCCCGCTGAAGACTCTGGCTGGCCACGAA 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 674 GTGCCTATGATAACACAGCCAAGATCTGGACGCACCCAGGCTGGTCCCCGCTGAAGACTCTGGCTGGCCACGAA 747
Query 1474 GGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCTCATAGCCACTTGCTCATATGACAGGACCTTCAA 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 748 GGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCTCATAGCCACTTGCTCATATGACAGGACCTTCAA 821
Query 1548 GCTGTGGATGGCTGAA 1563
||||||||||||||||
Sbjct 822 GCTGTGGATGGCTGAA 837