Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11339
- Subject:
- NR_136265.1
- Aligned Length:
- 2924
- Identities:
- 1514
- Gaps:
- 1410
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGACGCACTTCCTGTCAGTGACGCACTTCCCCTCTGCTGGGCGCGCGGTGGACGGTCTGAAAGGGAGTGTTC 74
Query 1 ------------------------------------ATGGCTTCCTCGCGAGCCTCTTCCAC---GGCAACCAA 35
|||||||||||||||||||||||||| |||||||||
Sbjct 75 GGGTTTCGCTGGGGCCTCGCGGCTCCAGAGCCCAGCATGGCTTCCTCGCGAGCCTCTTCCACGCAGGCAACCAA 148
Query 36 AACTAAAGCACCCGACGACTTAGTTGCTCCGGTCGTGAAGAAACCACACATCTATTATGGAAGTTTGGAAGAGA 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AACTAAAGCACCCGACGACTTAGTTGCTCCGGTCGTGAAGAAACCACACATCTATTATGGAAGTTTGGAAGAGA 222
Query 110 AGGAGAGGGAGCGTCTGGCCAAAGGAGAGTCTGGGATTTTGGGGAAAGACGGACTTAAAGCAGGGATCGAAGCT 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGAGAGGGAGCGTCTGGCCAAAGGAGAGTCTGGGATTTTGGGGAAAGACGGACTTAAAGCAGGGATCGAAGCT 296
Query 184 GGAAATATTAATATAACCTCTGGAGAAGTGTTTGAAATTGAAGAGCATATCAGCGAGCGACAGGCAGAAGTATT 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAAATATTAATATAACCTCTGGAGAAGTGTTTGAAATTGAAGAGCATATCAGCGAGCGACAGGCAGAAGTATT 370
Query 258 GGCTGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCC 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGCTGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCC 444
Query 332 TTAGAGCCTTGGGGGAACCCATCACACTTTTTGGAGAGGGTCCTGCTGAAAGAAGAGAAAGGTTAAGAAATATC 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTAGAGCCTTGGGGGAACCCATCACACTTTTTGGAGAGGGTCCTGCTGAAAGAAGAGAAAGGTTAAGAAATATC 518
Query 406 CTCTCAGTTGTCGGTACTGATGCCTTGAAAAAGACCAAAAAGGATGATGAGAAGTCTAAAAAGTCCAAAGAAGA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCTCAGTTGTCGGTACTGATGCCTTGAAAAAGACCAAAAAGGATGATGAGAAGTCTAAAAAGTCCAAAGAAGA 592
Query 480 GTATCAGCAAACCTGGTATCATGAAGGACCAAATAGCTTGAAGGTGGCAAGACTATGGATTGCTAATTATTCGT 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTATCAGCAAACCTGGTATCATGAAGGACCAAATAGCTTGAAGGTGGCAAGACTATGGATTGCTAATTATTCGT 666
Query 554 TGCCCAGGGCAATGAAACGCTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGCCCAGGGCAATGAAACGCTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAG 740
Query 628 ATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGAATAATTTTTGCAGTCAGATTGGGGATGATCGGCCTATCTC 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGAATAATTTTTGCAGTCAGATTGGGGATGATCGGCCTATCTC 814
Query 702 CTACTGTCACTTTAGTCCCAATTCCAAGATGCTGGCCACAGCTTGTTGGAGTGGGCTTTGCAAGCTCTGGTCTG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTACTGTCACTTTAGTCCCAATTCCAAGATGCTGGCCACAGCTTGTTGGAGTGGGCTTTGCAAGCTCTGGTCTG 888
Query 776 TTCCTGATTGCAACCTCCTTCACACTCTTCGAGGGCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAA 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTCCTGATTGCAACCTCCTTCACACTCTTCGAGGGCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAA 962
Query 850 TCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGCTTTGGAG 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGCTTTGGAG 1036
Query 924 TCTCGACAGTGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCGTGTGGCGCGGGTAATGTGGCATCCTT 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCTCGACAGTGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCGTGTGGCGCGGGTAATGTGGCATCCTT 1110
Query 998 CAGGACGTTTCCTGGGCACCACCTGCTATGACCGTTCATGGCGCTTATGGGATTTGGAGGCTCAAGAGGAGATC 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAGGACGTTTCCTGGGCACCACCTGCTATGACCGTTCATGGCGCTTATGGGATTTGGAGGCTCAAGAGGAGATC 1184
Query 1072 CTGCATCAGGAAGGCCATAGCATGGGTGTGTATGACATTGCCTTCCATCAAGATGGCTCTTTGGCTGGCACTGG 1145
|||||||||||||||||||||| |||
Sbjct 1185 CTGCATCAGGAAGGCCATAGCA-------------------------------------------------TGG 1209
Query 1146 GGGACTGGATGCATTTGGTCGAGTTTGGGACCTACGCACAGGACGTTGTATCATGTTCTTAGAAGGCCACCTGA 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1210 GGGACTGGATGCATTTGGTCGAGTTTGGGACCTACGCACAGGACGTTGTATCATGTTCTTAGAAGGCCACCTGA 1283
Query 1220 AAGAAATCTATGGAATAAATTTCTCCCCCAATGGCTATCACATTGCAACCGGCAGTGGTGACAACACCTGCAAA 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284 AAGAAATCTATGGAATAAATTTCTCCCCCAATGGCTATCACATTGCAACCGGCAGTGGTGACAACACCTGCAAA 1357
Query 1294 GTGTGGGACCTCCGACAGCGGCGTTGCGTCTACACCATCCCTGCTCATCAGAACTTAGTGACTGGTGTCAAGTT 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358 GTGTGGGACCTCCGACAGCGGCGTTGCGTCTACACCATCCCTGCTCATCAGAACTTAGTGACTGGTGTCAAGTT 1431
Query 1368 TGAGCCTATCCATGGGAACTTCTTGCTTACTGGTGCCTATGATAACACAGCCAAGATCTGGACGCACCCAGGCT 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432 TGAGCCTATCCATGGGAACTTCTTGCTTACTGGTGCCTATGATAACACAGCCAAGATCTGGACGCACCCAGGCT 1505
Query 1442 GGTCCCCGCTGAAGACTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCTC 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1506 GGTCCCCGCTGAAGACTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCTC 1579
Query 1516 ATAGCCACTTGCTCATATGACAGGACCTTCAAGCTGTGGATGGCTGAA-------------------------- 1563
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1580 ATAGCCACTTGCTCATATGACAGGACCTTCAAGCTGTGGATGGCTGAATAGATGACAATGGGAAAAGGACTTGA 1653
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 1654 ACCTCAAGCTCTCTCTAAGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTTTCT 1727
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 1728 GCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAGCCCCCACTCCAGGAAGGCAGCCCAAT 1801
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 1802 CCCTAGGTGATGGGGAACCCCTCTCACGGTTGAAAATTTATTACCTTTTTACGCCCTGCCACGAACTGTGTAGA 1875
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 1876 CATTGTTTTTATTAATCTTTTGTTTGGCCGGGCGTGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCG 1949
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 1950 AGGTGGGTAGATCGCTTGAGCTCAGGAGTTCAAGACGAGCCTGGGCAACATGGCAAATGCCGTCTCTGCAAAAA 2023
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2024 AATACTAAAATTAGCTGGTCGCGGTGGCTTCTGCCTGTGATTCCGGCTACTTGGGAGGCTGAGGTGGGAGGGAT 2097
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2098 TGCTTAAGCCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGCGCCATTGCACTCTAGCCTGTGTGACAGAGCA 2171
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2172 AGACCCTGTCTCAAAAAAAAAAAAAATTTGTTCGAATGCCTTATAGCCTTCCTCACAGCACCCAGGATTGTGAC 2245
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2246 TGACTCTGCATTTTTAATTCTTGAAACTTGGCTTTCCATAACATGGTACATGCTTCAGGACTACATATGACCCA 2319
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2320 GAGAGCAAGGTGGCTGAACTATAGTCTGGAAGCCCTCAGGTAAAGAGGCACATCTCACCACTCATTGGTTAAAC 2393
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2394 AATGCATCATAGCGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATG 2467
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2468 GTTATACAGTGAAGAAGACTTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGA 2541
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2542 ACTGAACATTTGCTTTGTCAGAAAATATCTTTTTTTTTACTTTGAAGTTTGGCAACCTTCATGTTACCCCAAAG 2615
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2616 CAAAACCATTGTGTCAGGAGTCAAACAAATGTTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTC 2689
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2690 TCTTGGCTGTTTAAAGGATGTACTTCGTGTATTAAAGGGTACTTTATGTTGAAGTAACGAAAAAACCCTAATGG 2763
Query 1564 -------------------------------------------------------------------------- 1563
Sbjct 2764 GTGTTCCTAAACCTAAACCTTTTCTTTATTCCACATTTGCTACGGTAAAATCCTGTTACAAAACTACCCTATAA 2837
Query 1564 -------------------------------------- 1563
Sbjct 2838 AGAATTATTTTCTATAGTTAAGCATTTTCTGAATCCTA 2875
