Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11425
• Subject: XM_011512233.1
• Aligned Length: 3187
• Identities: 1927
• Gaps: 1250

Alignment

Query    1  ATGGGGGAGATAGAAGGAACATACAGAGTCCTGCAGACTGCAGGGATGCGCTTGGGTGCCCAGACCCCTGTGGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGGGAGATAGAAGGAACATACAGAGTCCTGCAGACTGCAGGGATGCGCTTGGGTGCCCAGACCCCTGTGGG  74

Query   75  AGTTAGCACCCTTGAGCCTGGGCAGACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGTAAAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGTTAGCACCCTTGAGCCTGGGCAGACTCTCTTGCCCAGAATGCAAGAGAAGCACCTGCACCTCAGAGTAAAGC  148

Query  149  TGCTGGACAACACCATGGAAATATTTGACATTGAGCCTAAATGCGATGGCCAGGTATTACTGACACAAGTGTGG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCTGGACAACACCATGGAAATATTTGACATTGAGCCTAAATGCGATGGCCAGGTATTACTGACACAAGTGTGG  222

Query  223  AAGCGTTTAAACCTGGTAGAATGTGACTACTTCGGGATGGAGTTTCAAAATACTCAGTCCTACTGGATTTGGCT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAGCGTTTAAACCTGGTAGAATGTGACTACTTCGGGATGGAGTTTCAAAATACTCAGTCCTACTGGATTTGGCT  296

Query  297  TGAACCTATGAAACCCATCATTAGGCAAATACGAAGGCCAAAGAATGTGGTGCTTCGCCTAGCTGTAAAATTTT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGAACCTATGAAACCCATCATTAGGCAAATACGAAGGCCAAAGAATGTGGTGCTTCGCCTAGCTGTAAAATTTT  370

Query  371  TTCCACCTGATCCTGGTCAGCTACAAGAAGAATATACAAGATACTTGTTTGCCTTGCAACTTAAGAGAGACCTG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTCCACCTGATCCTGGTCAGCTACAAGAAGAATATACAAGATACTTGTTTGCCTTGCAACTTAAGAGAGACCTG  444

Query  445  CTGGAAGAGCGTTTGACCTGTGCTGACACCACAGCGGCCCTTCTCACGTCCCATCTCCTGCAGTCGGAAATAGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGGAAGAGCGTTTGACCTGTGCTGACACCACAGCGGCCCTTCTCACGTCCCATCTCCTGCAGTCGGAAATAGG  518

Query  519  AGATTACGATGAAACGCTGGACCGAGAGCACCTCAAAGTGAACGAGTATTTGCCTGGCCAGCAGCACTGCCTTG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGATTACGATGAAACGCTGGACCGAGAGCACCTCAAAGTGAACGAGTATTTGCCTGGCCAGCAGCACTGCCTTG  592

Query  593  AGAAGATACTAGAATTCCATCAGAAGCACGTGGGCCAGACACCTGCTGAGTCGGATTTCCAGGTGCTCGAAATT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGAAGATACTAGAATTCCATCAGAAGCACGTGGGCCAGACACCTGCTGAGTCGGATTTCCAGGTGCTCGAAATT  666

Query  667  GCTCGAAAGTTGGAAATGTACGGCATCAGATTTCACATGGCTTCTGACAGGGAAGGAACCAAGATTCAACTGGC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCTCGAAAGTTGGAAATGTACGGCATCAGATTTCACATGGCTTCTGACAGGGAAGGAACCAAGATTCAACTGGC  740

Query  741  AGTTTCCCACATGGGTGTACTCGTGTTCCAGGGCACCACCAAAATCAACACTTTCAACTGGTCCAAGGTCCGTA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGTTTCCCACATGGGTGTACTCGTGTTCCAGGGCACCACCAAAATCAACACTTTCAACTGGTCCAAGGTCCGTA  814

Query  815  AACTAAGCTTCAAGAGGAAAAGATTTCTTATCAAACTTCATCCAGAGGTTCATGGACCTTACCAGGACACATTA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AACTAAGCTTCAAGAGGAAAAGATTTCTTATCAAACTTCATCCAGAGGTTCATGGACCTTACCAGGACACATTA  888

Query  889  GAATTTTTGTTGGGTAGTAGAGATGAATGTAAGAACTTCTGGAAGATTTGTGTGGAGTATCACACCTTTTTTAG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAATTTTTGTTGGGTAGTAGAGATGAATGTAAGAACTTCTGGAAGATTTGTGTGGAGTATCACACCTTTTTTAG  962

Query  963  ACTTTTGGACCAACCTAAGCCAAAAGCAAAAGCCGTCTTCTTCAGCCGGGGCTCCTCCTTCAGATACAGTGGAA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ACTTTTGGACCAACCTAAGCCAAAAGCAAAAGCCGTCTTCTTCAGCCGGGGCTCCTCCTTCAGATACAGTGGAA  1036

Query 1037  GAACTCAGAAACAACTAGTAGATTATTTCAAAGACAGTGGAATGAAGAGAATTCCATATGAAAGAAGGCACAGC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GAACTCAGAAACAACTAGTAGATTATTTCAAAGACAGTGGAATGAAGAGAATTCCATATGAAAGAAGGCACAGC  1110

Query 1111  AAGACCCACACGTCCGTTCGAGCTCTGACTGCAGACCTACCAAAACAGAGCATCTCATTCCCCGAGGGATTGAG  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAGACCCACACGTCCGTTCGAGCTCTGACTGCAGACCTACCAAAACAGAGCATCTCATTCCCCGAGGGATTGAG  1184

Query 1185  GACTCCTGCCTCCCCATCTTCAGCGAATGCCTTTTACTCGCTCTCTCCCTCCACTCTGGTCCCCTCTGGCCTGC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GACTCCTGCCTCCCCATCTTCAGCGAATGCCTTTTACTCGCTCTCTCCCTCCACTCTGGTCCCCTCTGGCCTGC  1258

Query 1259  CAGAGTTTAAGGACAGCAGCAGCTCCCTCACAGATCCCCAGGTTTCCTACGTCAAGAGTCCAGCTGCAGAGAGG  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CAGAGTTTAAGGACAGCAGCAGCTCCCTCACAGATCCCCAGGTTTCCTACGTCAAGAGTCCAGCTGCAGAGAGG  1332

Query 1333  CGCAGTGGAGCAGTGGCTGGAGGCCCCGACACACCATCGGCCCAGCCCCTCGGGCCCCCCGCACTCCAGCCTGG  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CGCAGTGGAGCAGTGGCTGGAGGCCCCGACACACCATCGGCCCAGCCCCTCGGGCCCCCCGCACTCCAGCCTGG  1406

Query 1407  TCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCCTGAGTCTGAGCCCTGCAT  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCCAGGCCTTTCCACGAAGAGTCCTCAGCCTTCTCCCTCCAGCCGGAAGAGCCCCCTGAGTCTGAGCCCTGCAT  1480

Query 1481  TTCAGGTGCCTTTGGGCCCAGCTGAACAGGGCTCATCCCCACTCCTGAGCCCTGTCCTCAGTGATGCTGGCGGA  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TTCAGGTGCCTTTGGGCCCAGCTGAACAGGGCTCATCCCCACTCCTGAGCCCTGTCCTCAGTGATGCTGGCGGA  1554

Query 1555  GCCGGGATGGACTGCGAGGAGCCCAGACACAAGCGCGTGCCTGCAGACGAGGCCTACTTCATAGTCAAAGAGAT  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GCCGGGATGGACTGCGAGGAGCCCAGACACAAGCGCGTGCCTGCAGACGAGGCCTACTTCATAGTCAAAGAGAT  1628

Query 1629  TCTCGCTACAGAACGAACATACCTCAAGGATTTAGAAGTTATTACCGTGTGGTTCCGCAGCGCAGTGGTGAAGG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TCTCGCTACAGAACGAACATACCTCAAGGATTTAGAAGTTATTACCGTGTGGTTCCGCAGCGCAGTGGTGAAGG  1702

Query 1703  AGGACGCCATGCCTGCGACTCTGATGACGCTGCTCTTCTCCAACATCGATCCCATCTATGAGTTCCACAGAGGC  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AGGACGCCATGCCTGCGACTCTGATGACGCTGCTCTTCTCCAACATCGATCCCATCTATGAGTTCCACAGAGGC  1776

Query 1777  TTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAGGCAGTCATCA  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TTCCTGCGCGAGGTGGAGCAGAGGCTGGCACTCTGGGAAGGGCCCTCCAAAGCCCACACAAAAGGCAGTCATCA  1850

Query 1851  ACGAATCGGGGACATCCTGCTCAGGAACATGCGCCAGTTAAAGGTGTT--CCAGCT-CCACGAAGGGCATGTAG  1921
            ||||||||||||||||||||||||||||||||||||||||||||.|||  |||||| |..|.||.|.||||   
Sbjct 1851  ACGAATCGGGGACATCCTGCTCAGGAACATGCGCCAGTTAAAGGAGTTTACCAGCTACTTCCAAAGACATG---  1921

Query 1922  CA-GGGGTC---ACAAAAATGGAG--------------------------------------------------  1941
             | |.||||   |||.||.||||.                                                  
Sbjct 1922  -ACGAGGTCCTAACAGAACTGGAAAAGGCTACCAAACGCTGTAAGAAGTTGGAGGCAGTGTACAAGGAGTTTGA  1994

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 1995  GCTGCAGAAGGTCTGCTACTTGCCTCTCAACACGTTCCTGCTGAAGCCCATCCAGCGGCTGCTGCACTACCGCC  2068

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2069  TGCTGCTGCGCCGCCTATGCGGACATTACAGCCCCGGGCACCATGACTACGCTGACTGCCATGACGCCCTGAAA  2142

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2143  GCCATCACAGAGGTGACCACCACACTACAGCACATTCTCATCCGGCTGGAGAACCTGCAGAAGCTAACGGAGCT  2216

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2217  GCAGCGGGACCTGGTGGGCATAGAGAACCTCATTGCTCCTGGCAGGGAGTTCATCCGTGAGGGCTGCCTTCACA  2290

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2291  AGCTCACCAAGAAGGGCCTGCAGCAGAGGATGTTTTTTCTGTTCTCAGATATGTTGCTGTACACAAGCAAAGGA  2364

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2365  GTTGCAGGGACCAGCCACTTCCGGATCCGGGGCCTCCTTCCCCTCCAAGGCATGCTGCTAATAGTGCTGGACCC  2438

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2439  CCCGGTGGAAGAAAGTGATAACGAGTGGTCTGTTCCACACTGTTTCACCATCTACGCGGCTCAGAAAACAATCG  2512

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2513  TGGTGGCAGCCAGCACTCGGCTGGAGAAAGAGAAGTGGATGCTGGACCTGAACTCCGCGATCCAAGCAGCCAAG  2586

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2587  AGTGGCGGTGACACGGCCCCTGCACTGCCAGGCCGCACTGTGTGCACTCGTCCCCCCAGATCCCCCAACGAGGT  2660

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2661  ATCTCTGGAGCAGGAGTCAGAAGATGATGCTCGGGGTGTCCGCAGCTCCCTGGAGGGGCATGGCCAGCACCGGG  2734

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2735  CCAACACCACAATGCACGTGTGCTGGTACCGGAACACCAGCGTGTCCAGGGCAGACCACAGTGCAGCTGTCGAG  2808

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2809  AACCAGCTTTCAGGATATCTGCTAAGAAAGTTCAAAAACAGTCATGGCTGGCAGAAGCTCTGGGTCGTCTTTAC  2882

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2883  CAACTTCTGTTTGTTCTTCTACAAAACTCATCAGGATGACTACCCACTGGCCAGCCTCCCGCTGCTGGGCTACA  2956

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 2957  GCGTGAGCATCCCCAGGGAGGCCGATGGCATACACAAAGACTATGTTTTCAAGCTCCAGTTCAAATCCCACGTC  3030

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 3031  TACTTCTTCCGGGCTGAGAGCAAGTACACATTTGAAAGGTGGATGGAGGTGATCCAGGGGGCCAGCAGCTCAGC  3104

Query 1942  --------------------------------------------------------------------------  1941
                                                                                      
Sbjct 3105  CGGGAGGGCCCCAAGCATCGTGCAGGATGGCCCCCAACCCTCCTCAGGGCTGGAGGGGATGGTCAGGGGGAAGG  3178

Query 1942  -----  1941
                 
Sbjct 3179  AGGAA  3183